| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91789088
Identifier: 91789088
GI number: 91789088
Start: 3417838
End: 3418932
Strand: Direct
Name: 91789088
Synonym: Bpro_3228
Alternate gene names: NA
Gene position: 3417838-3418932 (Clockwise)
Preceding gene: 91789086
Following gene: 91789092
Centisome position: 65.72
GC content: 64.84
Gene sequence:
>1095_bases ATGAGCCCTCCCACGACGCCCGCCTGCATCACGCACGGCATGCCGCGGCGCCGCTTCCTGCTGGCGACCGGCCTGGCGGG CCTGGCCTGGACCGGGCCGGCGTGTGCCTTGCCGGCCAGGACCATGCAGTTTCCGCGCGACTTCGGCTCCCACCCGGACT TTCGCACCGAGTGGTGGTACATCACCGGGCACACGGCAGCAGGCGGACGGGAGTTCGGTTTCCAGCTCACATTTTTCCGC TCGCGGGTGGAGGGCACCCAGGCCATGGTGTCAAGGTTTGCGGCCAGGCAATTGCTCTTCGCCCATGCGGCCATCACCGA CGTGCAGGGCAAGAAACTCTGGCATGACCAGCGCATCGCGCGTGACGGCTTTGGCGTGGCTTTTGCCAGCGAAGCGGACA TGCACATCAAGCTGCGCGACTGGTCGCTGCAGGGCCGGGGCAGCCGCTACACCGCGGAGCTGCCGGCCACGGACTTTGCA CTGAAGCTGCAATTTGAAGAAACCCAGGCCGTGCTGCTGCAAGGCAGGCAGGGCCTGTCGCGCAAGGGGCCACAGGAAAA GCAGGCAAGCTACTACTACAGCCAGCCGCAGCTGGCCACCCGAGGAACCTTGCAACTCAAGGGCCAGGCGTTTGAAGTCA CGGGCAAAGCCTGGCTGGACCATGAGTGGAGCGAGGAAGTGCTGCACCCCAGCGCGACCGGCTGGGACTGGATAGGCATG AACCTGGACGATGGCAGCGCCCTCACCGCCTTCCGCCTGCGGGACAAGGACGGCAGCGCGCTGTGGGACGGCGGCTCTTT CAGGTCGCCGAAAGCCGGGCTGTATACCTTCAACCGCGGCGAAGTGATCTTCAAACCAGTGCGCAGCTGGAAGAGTCCGC TCACGCAGGCGAGCTACCCGGTTGAATGGATTGTCCGCACACCCGCTGACTATTACACCGTCAGGGCCGTGATAGACAAC CAGGAACTCGACAGCCGCCAGTCAACCGGCGCGGTGTATTGGGAAGGCCTGAGCGAGCTGATCGACAGCAACGGCAAGCG CGTGGGCAGCGGTTACCTGGAGATGACAGGTTACGCACAGCGGCTTCGGCTGTAG
Upstream 100 bases:
>100_bases AGTGACTCGTGCAGTTTCAAGCATAGACCTTCCGGTGGCGCCATGCAACTACACCGCCCGGTCGCTGCCACGCCAGGCGC ACTGCTGCGAGAATCAAGAC
Downstream 100 bases:
>100_bases CGGGCCGGCGTGTTCTGGTCAGCAGCCCTCAACGGCAATGAGATGATCGGTTGCTGCCGGCTGACGCATGGCGAGCAAGG GCGCGTACTCCGGCGAGTGG
Product: secreted hydrolase-like protein
Products: NA
Alternate protein names: Secreted Hydrolase; Hydrolase; Lipoprotein; ABC Transporter Type C Secreted Protein; Hydroxyneurosporene Synthase; ABC Transporter Lipoprotein; Secreted Hydrolase-Like; Twin-Arginine Translocation Pathway Signal; ABC-Type Transport System Hydrolase Component; Signal Peptide; Attachment Protein; Hydroxymethylglutaryl-Co A Reductase
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MSPPTTPACITHGMPRRRFLLATGLAGLAWTGPACALPARTMQFPRDFGSHPDFRTEWWYITGHTAAGGREFGFQLTFFR SRVEGTQAMVSRFAARQLLFAHAAITDVQGKKLWHDQRIARDGFGVAFASEADMHIKLRDWSLQGRGSRYTAELPATDFA LKLQFEETQAVLLQGRQGLSRKGPQEKQASYYYSQPQLATRGTLQLKGQAFEVTGKAWLDHEWSEEVLHPSATGWDWIGM NLDDGSALTAFRLRDKDGSALWDGGSFRSPKAGLYTFNRGEVIFKPVRSWKSPLTQASYPVEWIVRTPADYYTVRAVIDN QELDSRQSTGAVYWEGLSELIDSNGKRVGSGYLEMTGYAQRLRL
Sequences:
>Translated_364_residues MSPPTTPACITHGMPRRRFLLATGLAGLAWTGPACALPARTMQFPRDFGSHPDFRTEWWYITGHTAAGGREFGFQLTFFR SRVEGTQAMVSRFAARQLLFAHAAITDVQGKKLWHDQRIARDGFGVAFASEADMHIKLRDWSLQGRGSRYTAELPATDFA LKLQFEETQAVLLQGRQGLSRKGPQEKQASYYYSQPQLATRGTLQLKGQAFEVTGKAWLDHEWSEEVLHPSATGWDWIGM NLDDGSALTAFRLRDKDGSALWDGGSFRSPKAGLYTFNRGEVIFKPVRSWKSPLTQASYPVEWIVRTPADYYTVRAVIDN QELDSRQSTGAVYWEGLSELIDSNGKRVGSGYLEMTGYAQRLRL >Mature_363_residues SPPTTPACITHGMPRRRFLLATGLAGLAWTGPACALPARTMQFPRDFGSHPDFRTEWWYITGHTAAGGREFGFQLTFFRS RVEGTQAMVSRFAARQLLFAHAAITDVQGKKLWHDQRIARDGFGVAFASEADMHIKLRDWSLQGRGSRYTAELPATDFAL KLQFEETQAVLLQGRQGLSRKGPQEKQASYYYSQPQLATRGTLQLKGQAFEVTGKAWLDHEWSEEVLHPSATGWDWIGMN LDDGSALTAFRLRDKDGSALWDGGSFRSPKAGLYTFNRGEVIFKPVRSWKSPLTQASYPVEWIVRTPADYYTVRAVIDNQ ELDSRQSTGAVYWEGLSELIDSNGKRVGSGYLEMTGYAQRLRL
Specific function: Unknown
COG id: COG5621
COG function: function code R; Predicted secreted hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40888; Mature: 40756
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPTTPACITHGMPRRRFLLATGLAGLAWTGPACALPARTMQFPRDFGSHPDFRTEWWY CCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCEEEEE ITGHTAAGGREFGFQLTFFRSRVEGTQAMVSRFAARQLLFAHAAITDVQGKKLWHDQRIA EEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH RDGFGVAFASEADMHIKLRDWSLQGRGSRYTAELPATDFALKLQFEETQAVLLQGRQGLS HCCCCEEEECCCCEEEEEEEEEECCCCCEEEEECCCCCEEEEEEECHHHHHHHHCCCCCC RKGPQEKQASYYYSQPQLATRGTLQLKGQAFEVTGKAWLDHEWSEEVLHPSATGWDWIGM CCCCCHHHCCEEECCCCCCCCCEEEECCEEEEECCCEECCCCCHHHHCCCCCCCCEEEEE NLDDGSALTAFRLRDKDGSALWDGGSFRSPKAGLYTFNRGEVIFKPVRSWKSPLTQASYP ECCCCCEEEEEEEECCCCCEEECCCCCCCCCCCEEEECCCCEEEEEHHHHHCCCCCCCCC VEWIVRTPADYYTVRAVIDNQELDSRQSTGAVYWEGLSELIDSNGKRVGSGYLEMTGYAQ EEEEEECCCCCEEEEEEECCCCCCCCCCCCEEHHHHHHHHHCCCCCEECCCEEEECCHHH RLRL HHCC >Mature Secondary Structure SPPTTPACITHGMPRRRFLLATGLAGLAWTGPACALPARTMQFPRDFGSHPDFRTEWWY CCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCEEEEE ITGHTAAGGREFGFQLTFFRSRVEGTQAMVSRFAARQLLFAHAAITDVQGKKLWHDQRIA EEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH RDGFGVAFASEADMHIKLRDWSLQGRGSRYTAELPATDFALKLQFEETQAVLLQGRQGLS HCCCCEEEECCCCEEEEEEEEEECCCCCEEEEECCCCCEEEEEEECHHHHHHHHCCCCCC RKGPQEKQASYYYSQPQLATRGTLQLKGQAFEVTGKAWLDHEWSEEVLHPSATGWDWIGM CCCCCHHHCCEEECCCCCCCCCEEEECCEEEEECCCEECCCCCHHHHCCCCCCCCEEEEE NLDDGSALTAFRLRDKDGSALWDGGSFRSPKAGLYTFNRGEVIFKPVRSWKSPLTQASYP ECCCCCEEEEEEEECCCCCEEECCCCCCCCCCCEEEECCCCEEEEEHHHHHCCCCCCCCC VEWIVRTPADYYTVRAVIDNQELDSRQSTGAVYWEGLSELIDSNGKRVGSGYLEMTGYAQ EEEEEECCCCCEEEEEEECCCCCCCCCCCCEEHHHHHHHHHCCCCCEECCCEEEECCHHH RLRL HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA