Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91789086

Identifier: 91789086

GI number: 91789086

Start: 3416947

End: 3417252

Strand: Direct

Name: 91789086

Synonym: Bpro_3226

Alternate gene names: NA

Gene position: 3416947-3417252 (Clockwise)

Preceding gene: 91789084

Following gene: 91789088

Centisome position: 65.71

GC content: 64.38

Gene sequence:

>306_bases
ATGCAGATCAAGCTGCTGGTTGTTGGCTTTTGGCTTCTTGGAAGGCGTGCAATGAACATCCTGTTCGCGGCAATTGTTCT
GGCCCTGATTTGCCTGCTGGTCATCTGGCTGGTGCCGAACTGGGACGCGCTGAGCGCGCAGCTGAAGGCTTATTTTTCGG
GCCCTCCCCGGACCCGGGTCGACGAGGCCAGAATCCAGCCGGTGCCGCCACCGCGCTCGCGCGAACACCCCCATGACGAC
CAGCCGACGAGGCCGCAGACCGGCCAGCGGCACACCGTGGTGCCTCACCAGGCGCGGGGACGCTAA

Upstream 100 bases:

>100_bases
AGCCAGGGCGCGTAAGGCTCAAAAGGAAGGCGCCGGAGCGCAAAATTGGGGGAGTGCAAAACCGCGCCAACAGGGGTAGC
ATGCGGGAATCTGCCACAGC

Downstream 100 bases:

>100_bases
GACCAGCGCAGAGCTGCAGACTCAGCGGGTCAGTGAACGATGACCACGAGCACACTGCAGGGTGCGTGCTCGATCAGCGA
TTTGGAAACCGAGCCCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MQIKLLVVGFWLLGRRAMNILFAAIVLALICLLVIWLVPNWDALSAQLKAYFSGPPRTRVDEARIQPVPPPRSREHPHDD
QPTRPQTGQRHTVVPHQARGR

Sequences:

>Translated_101_residues
MQIKLLVVGFWLLGRRAMNILFAAIVLALICLLVIWLVPNWDALSAQLKAYFSGPPRTRVDEARIQPVPPPRSREHPHDD
QPTRPQTGQRHTVVPHQARGR
>Mature_101_residues
MQIKLLVVGFWLLGRRAMNILFAAIVLALICLLVIWLVPNWDALSAQLKAYFSGPPRTRVDEARIQPVPPPRSREHPHDD
QPTRPQTGQRHTVVPHQARGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11502; Mature: 11502

Theoretical pI: Translated: 11.89; Mature: 11.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIKLLVVGFWLLGRRAMNILFAAIVLALICLLVIWLVPNWDALSAQLKAYFSGPPRTRV
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC
DEARIQPVPPPRSREHPHDDQPTRPQTGQRHTVVPHQARGR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQIKLLVVGFWLLGRRAMNILFAAIVLALICLLVIWLVPNWDALSAQLKAYFSGPPRTRV
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC
DEARIQPVPPPRSREHPHDDQPTRPQTGQRHTVVPHQARGR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA