The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ybjZ [C]

Identifier: 91789084

GI number: 91789084

Start: 3413792

End: 3416398

Strand: Direct

Name: ybjZ [C]

Synonym: Bpro_3224

Alternate gene names: 91789084

Gene position: 3413792-3416398 (Clockwise)

Preceding gene: 91789083

Following gene: 91789086

Centisome position: 65.65

GC content: 68.7

Gene sequence:

>2607_bases
GTGTTCGCCCTTTTGCAAACCTTTTCCTGGAAGGAACTGCGCTACCACCCCTGGCGCAATGCCGCCGCCGTGGTCGCCGT
CATGCTGGGCGTGGCCCTGGCGTTTTCAGTGCACCTGATCAATGCCTCGGCGCTCAGCGAGTTTTCCCAGGCGGTGCGCG
CCGTCAACGGCCAGCCTGACCTGGAACTGCGGGCCGTGCAGGGCGGCTTTGACGAAGCGCTTTACCGCCAGGTGGCCAAC
CATCCGCAGGTCGCGCTTGCCAGCCCGGTGCTGGAACTGGCCACCTACGCACTGGGCGGCAAGGGGGAGCGGCAGGCCCT
GCGCATCGTTGGCGTCGATGCACTGGTGGTGGCCGGCATTGCCCCGGCGCTGATGCCCGTTCCGGCTTCGGATGCCGCGG
TGACGGACCGCTTTGCGCTGTTTGCGCCGGACACGATTTTTCTCAATCCCGCCGCCCGCCAGGTTTTCAAGGCTGACCAG
CTGCAACTGCAAAGTGGCCTGCAATGGAAAAGCGTCACCGTGGCTGGCAGCGTGAGTACGGGCGGAGGCCCGCTGGGCGT
GATGGACATCGCTGCCGCACAGGATCTGTTTGGCAAAGGCGGCCAGCTGTCGCGCATTGACGTGCGCCTGAAAGCCGGCA
GTGATGCGGCAAGCTTCGCCGCCTCGCTGCGGCTGCCACCCCACATCACCGCGACCGCGCCCGGCGATGCGGCAGAGCGC
GTGAGCAACCTGTCGCGCGCCTACCGGGTCAACCTGACCGTACTGGCGCTGGTGGCCCTGTTCACCGGTGCGTTTCTGGT
GTTCTCGGTGCTCTCGCTCAGCGTGGCCAAGCGCGCCCAGCAGTTCGCGCTGCTCGGCGTGCTCGGCCTGACAGGCCGCG
AACGTTTGCAACTGGTACTGGCCGAATCGCTGTTGCTGGGCGGGGTGGGCAGTGCCGCGGGCATTGCGCTGGGCAGCGCG
CTGGCCGCACTGGCGCTGCGTCTTCTGGGCGGTGACCTGGGCGGCGGCTACTTCGCCGGCGTGGCACCCAGCCTGCAATG
GAACGGCTGGGCAGCCCTGGTCTATGGCGCGCTCGGCGTGGCGGCGGCCGGCGTGGGCGGCTGGTGGCCGGCGCGCGCCG
CCCAGCAGCTGCCGCCGGCGCAAACCCTGAAGGGGCTGGGCCTGGCCGCCGGCACCGGCTCCGCACGCTGGCTCAGTATC
GTTTTGATCGCTGCCAGCGCCCTTTTGGCATTGGCTCCGCCGGTATTTGGCATTCCGCTGGCGGCTTATCTGTCTGTCGG
CGCGTTGCTGGTGGGCGGCATCACCGCCCTGCCCTGGCTGATTGCGCTGCTCTACGGCAGGCTCAGCCCCTGGGTGGCCC
ACCGCCTGCTGCCGCTGCTGGCCGTGGAGCGCGCGCGCCGGGTGCGCGAAAGCGCGGCCGTGGCCGTCAGCGGCGTGGTG
GCGTCGCTGAGCCTGGCCGTGGCGCTGACCGTGATGGTGGCCAGTTTCCGCGACTCGGTCACGCACTGGCTGGACGTGGT
GCTGCCCGCCGATTTGTATGTGCGCACGGGTCTTGGTGGCCCGGCCAGCGACACCGCCTATTTCCCGCCCGGCTTTGTCG
AGACGCTGGCCCGGCTGCCTGGCGTCGCGCGCGTGAGCGCACTGCGCACCCGGCAGCTGTTGCTGGACCCGGGCAAACCT
GCCGTCACCCTGATTGCGCGCGCCATCGGCGACGCAGCCACCACGCTGCCGCTGGTGGGCAGCCCGCTGCCGGTGCCGCC
CGGGCATGCCGGCATCTATGTCAGTGAAGCCATGGTGGACCTGTATGGCGCCCGGCCGGGCAGCGTTTTTCTTCCCCTTT
CGCAGGCTTTTGGGGCCTATACCCAGGAAAACAGCGCGCCACCGGCTCCTGATTCAACGTCAGCGGCAAACGCACCTCGC
CCGGCTGCGCCGGCTGCCACGCCGTTTTTTGTGGCCGGTGTCTGGCGTGATTACGCACGCCAGTTTGGCGCAATCGTGAT
GGCGCAGCAGGACTTTGAGCGCCTGACCGGCGACCGGCGCGTCAATGACGTGGCGCTGTGGCTGAACGGTGATGTGGGCG
AGGCCCAGGTGCAGCAGGCAATACGCCGGCTGGCCGAGCAGCAGCCGGGGGCGGGCGCTCTGCTGGAGCTGGCGTCCGTC
AGCCAGCTTCGCGCCATCTCGCTCAGGATTTTTGACCGCAGTTTTGCAGTGACCTACTGGCTGCAGGCCGTGGCGATTGC
CATCGGCCTGTTTGGCGTGGCCGCGAGCTTCAGCGCGCAGGTTCTGGCGCGCCGCAAGGAGTTTGGCCTGCTGGCACATC
TGGGCTTGACCCGGCGACAAATCCTGACGGTGGTGGCTGGCGAGGGCGCGGCCTGGACGGCGATCGGCGCGCTGGCTGGG
CTGGCGCTGGGCCTGGCGGTGTCCACCATACTGGTTCACGTGGTCAACCCGCAGAGCTTTCACTGGACCATGGACCTGAT
GCTGCCCTGGCTTCGCCTGCTGGCCTTGTGCGCGGCGGTGGTAATTGCCGGCACACTGACCGCCTGGCTGGCGGGGCGAG
CAGCCGCCGGCAAGGATGCCGTGCTGGCCGTCAAGGAAGACTGGTAG

Upstream 100 bases:

>100_bases
TGACTGCGGCAATGGTGCGCCGGAGCGCGCGCCCCGCCACCGACCGTCCAGTCATCATCGGGCCATCACGCGGCGGCGCA
TCCCTCACAATGCAGGAACC

Downstream 100 bases:

>100_bases
CCCGCCGGGTAGTCCGTCCCTGGCAGCCCGGCGCGGCCGCCATGCTGCCCGTGCCCTCGCCGTCTAGTGGTGACTATCCG
CCTTTTCAGGCGTATCCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter Permease Protein; Permease; ABC Transporter Membrane Protein; Abc Transporter Permease Protein; ABC-Type Transport System Permease Component

Number of amino acids: Translated: 868; Mature: 868

Protein sequence:

>868_residues
MFALLQTFSWKELRYHPWRNAAAVVAVMLGVALAFSVHLINASALSEFSQAVRAVNGQPDLELRAVQGGFDEALYRQVAN
HPQVALASPVLELATYALGGKGERQALRIVGVDALVVAGIAPALMPVPASDAAVTDRFALFAPDTIFLNPAARQVFKADQ
LQLQSGLQWKSVTVAGSVSTGGGPLGVMDIAAAQDLFGKGGQLSRIDVRLKAGSDAASFAASLRLPPHITATAPGDAAER
VSNLSRAYRVNLTVLALVALFTGAFLVFSVLSLSVAKRAQQFALLGVLGLTGRERLQLVLAESLLLGGVGSAAGIALGSA
LAALALRLLGGDLGGGYFAGVAPSLQWNGWAALVYGALGVAAAGVGGWWPARAAQQLPPAQTLKGLGLAAGTGSARWLSI
VLIAASALLALAPPVFGIPLAAYLSVGALLVGGITALPWLIALLYGRLSPWVAHRLLPLLAVERARRVRESAAVAVSGVV
ASLSLAVALTVMVASFRDSVTHWLDVVLPADLYVRTGLGGPASDTAYFPPGFVETLARLPGVARVSALRTRQLLLDPGKP
AVTLIARAIGDAATTLPLVGSPLPVPPGHAGIYVSEAMVDLYGARPGSVFLPLSQAFGAYTQENSAPPAPDSTSAANAPR
PAAPAATPFFVAGVWRDYARQFGAIVMAQQDFERLTGDRRVNDVALWLNGDVGEAQVQQAIRRLAEQQPGAGALLELASV
SQLRAISLRIFDRSFAVTYWLQAVAIAIGLFGVAASFSAQVLARRKEFGLLAHLGLTRRQILTVVAGEGAAWTAIGALAG
LALGLAVSTILVHVVNPQSFHWTMDLMLPWLRLLALCAAVVIAGTLTAWLAGRAAAGKDAVLAVKEDW

Sequences:

>Translated_868_residues
MFALLQTFSWKELRYHPWRNAAAVVAVMLGVALAFSVHLINASALSEFSQAVRAVNGQPDLELRAVQGGFDEALYRQVAN
HPQVALASPVLELATYALGGKGERQALRIVGVDALVVAGIAPALMPVPASDAAVTDRFALFAPDTIFLNPAARQVFKADQ
LQLQSGLQWKSVTVAGSVSTGGGPLGVMDIAAAQDLFGKGGQLSRIDVRLKAGSDAASFAASLRLPPHITATAPGDAAER
VSNLSRAYRVNLTVLALVALFTGAFLVFSVLSLSVAKRAQQFALLGVLGLTGRERLQLVLAESLLLGGVGSAAGIALGSA
LAALALRLLGGDLGGGYFAGVAPSLQWNGWAALVYGALGVAAAGVGGWWPARAAQQLPPAQTLKGLGLAAGTGSARWLSI
VLIAASALLALAPPVFGIPLAAYLSVGALLVGGITALPWLIALLYGRLSPWVAHRLLPLLAVERARRVRESAAVAVSGVV
ASLSLAVALTVMVASFRDSVTHWLDVVLPADLYVRTGLGGPASDTAYFPPGFVETLARLPGVARVSALRTRQLLLDPGKP
AVTLIARAIGDAATTLPLVGSPLPVPPGHAGIYVSEAMVDLYGARPGSVFLPLSQAFGAYTQENSAPPAPDSTSAANAPR
PAAPAATPFFVAGVWRDYARQFGAIVMAQQDFERLTGDRRVNDVALWLNGDVGEAQVQQAIRRLAEQQPGAGALLELASV
SQLRAISLRIFDRSFAVTYWLQAVAIAIGLFGVAASFSAQVLARRKEFGLLAHLGLTRRQILTVVAGEGAAWTAIGALAG
LALGLAVSTILVHVVNPQSFHWTMDLMLPWLRLLALCAAVVIAGTLTAWLAGRAAAGKDAVLAVKEDW
>Mature_868_residues
MFALLQTFSWKELRYHPWRNAAAVVAVMLGVALAFSVHLINASALSEFSQAVRAVNGQPDLELRAVQGGFDEALYRQVAN
HPQVALASPVLELATYALGGKGERQALRIVGVDALVVAGIAPALMPVPASDAAVTDRFALFAPDTIFLNPAARQVFKADQ
LQLQSGLQWKSVTVAGSVSTGGGPLGVMDIAAAQDLFGKGGQLSRIDVRLKAGSDAASFAASLRLPPHITATAPGDAAER
VSNLSRAYRVNLTVLALVALFTGAFLVFSVLSLSVAKRAQQFALLGVLGLTGRERLQLVLAESLLLGGVGSAAGIALGSA
LAALALRLLGGDLGGGYFAGVAPSLQWNGWAALVYGALGVAAAGVGGWWPARAAQQLPPAQTLKGLGLAAGTGSARWLSI
VLIAASALLALAPPVFGIPLAAYLSVGALLVGGITALPWLIALLYGRLSPWVAHRLLPLLAVERARRVRESAAVAVSGVV
ASLSLAVALTVMVASFRDSVTHWLDVVLPADLYVRTGLGGPASDTAYFPPGFVETLARLPGVARVSALRTRQLLLDPGKP
AVTLIARAIGDAATTLPLVGSPLPVPPGHAGIYVSEAMVDLYGARPGSVFLPLSQAFGAYTQENSAPPAPDSTSAANAPR
PAAPAATPFFVAGVWRDYARQFGAIVMAQQDFERLTGDRRVNDVALWLNGDVGEAQVQQAIRRLAEQQPGAGALLELASV
SQLRAISLRIFDRSFAVTYWLQAVAIAIGLFGVAASFSAQVLARRKEFGLLAHLGLTRRQILTVVAGEGAAWTAIGALAG
LALGLAVSTILVHVVNPQSFHWTMDLMLPWLRLLALCAAVVIAGTLTAWLAGRAAAGKDAVLAVKEDW

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90151; Mature: 90151

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFALLQTFSWKELRYHPWRNAAAVVAVMLGVALAFSVHLINASALSEFSQAVRAVNGQPD
CCHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LELRAVQGGFDEALYRQVANHPQVALASPVLELATYALGGKGERQALRIVGVDALVVAGI
CEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHH
APALMPVPASDAAVTDRFALFAPDTIFLNPAARQVFKADQLQLQSGLQWKSVTVAGSVST
HHHHCCCCCCCCHHHCCEEEECCCEEEECHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
GGGPLGVMDIAAAQDLFGKGGQLSRIDVRLKAGSDAASFAASLRLPPHITATAPGDAAER
CCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHCCCCCCEEECCCCHHHHH
VSNLSRAYRVNLTVLALVALFTGAFLVFSVLSLSVAKRAQQFALLGVLGLTGRERLQLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AESLLLGGVGSAAGIALGSALAALALRLLGGDLGGGYFAGVAPSLQWNGWAALVYGALGV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHH
AAAGVGGWWPARAAQQLPPAQTLKGLGLAAGTGSARWLSIVLIAASALLALAPPVFGIPL
HHCCCCCCCHHHHHHHCCCHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
AAYLSVGALLVGGITALPWLIALLYGRLSPWVAHRLLPLLAVERARRVRESAAVAVSGVV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLSLAVALTVMVASFRDSVTHWLDVVLPADLYVRTGLGGPASDTAYFPPGFVETLARLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCC
GVARVSALRTRQLLLDPGKPAVTLIARAIGDAATTLPLVGSPLPVPPGHAGIYVSEAMVD
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCEEHHHHHHH
LYGARPGSVFLPLSQAFGAYTQENSAPPAPDSTSAANAPRPAAPAATPFFVAGVWRDYAR
HHCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
QFGAIVMAQQDFERLTGDRRVNDVALWLNGDVGEAQVQQAIRRLAEQQPGAGALLELASV
HHHHEEEEHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
SQLRAISLRIFDRSFAVTYWLQAVAIAIGLFGVAASFSAQVLARRKEFGLLAHLGLTRRQ
HHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ILTVVAGEGAAWTAIGALAGLALGLAVSTILVHVVNPQSFHWTMDLMLPWLRLLALCAAV
HEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHH
VIAGTLTAWLAGRAAAGKDAVLAVKEDW
HHHHHHHHHHHCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MFALLQTFSWKELRYHPWRNAAAVVAVMLGVALAFSVHLINASALSEFSQAVRAVNGQPD
CCHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LELRAVQGGFDEALYRQVANHPQVALASPVLELATYALGGKGERQALRIVGVDALVVAGI
CEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHH
APALMPVPASDAAVTDRFALFAPDTIFLNPAARQVFKADQLQLQSGLQWKSVTVAGSVST
HHHHCCCCCCCCHHHCCEEEECCCEEEECHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
GGGPLGVMDIAAAQDLFGKGGQLSRIDVRLKAGSDAASFAASLRLPPHITATAPGDAAER
CCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHCCCCCCEEECCCCHHHHH
VSNLSRAYRVNLTVLALVALFTGAFLVFSVLSLSVAKRAQQFALLGVLGLTGRERLQLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AESLLLGGVGSAAGIALGSALAALALRLLGGDLGGGYFAGVAPSLQWNGWAALVYGALGV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHH
AAAGVGGWWPARAAQQLPPAQTLKGLGLAAGTGSARWLSIVLIAASALLALAPPVFGIPL
HHCCCCCCCHHHHHHHCCCHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
AAYLSVGALLVGGITALPWLIALLYGRLSPWVAHRLLPLLAVERARRVRESAAVAVSGVV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLSLAVALTVMVASFRDSVTHWLDVVLPADLYVRTGLGGPASDTAYFPPGFVETLARLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCC
GVARVSALRTRQLLLDPGKPAVTLIARAIGDAATTLPLVGSPLPVPPGHAGIYVSEAMVD
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCEEHHHHHHH
LYGARPGSVFLPLSQAFGAYTQENSAPPAPDSTSAANAPRPAAPAATPFFVAGVWRDYAR
HHCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
QFGAIVMAQQDFERLTGDRRVNDVALWLNGDVGEAQVQQAIRRLAEQQPGAGALLELASV
HHHHEEEEHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
SQLRAISLRIFDRSFAVTYWLQAVAIAIGLFGVAASFSAQVLARRKEFGLLAHLGLTRRQ
HHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ILTVVAGEGAAWTAIGALAGLALGLAVSTILVHVVNPQSFHWTMDLMLPWLRLLALCAAV
HEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHH
VIAGTLTAWLAGRAAAGKDAVLAVKEDW
HHHHHHHHHHHCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA