The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yycJ [H]

Identifier: 91789032

GI number: 91789032

Start: 3357969

End: 3358757

Strand: Direct

Name: yycJ [H]

Synonym: Bpro_3172

Alternate gene names: 91789032

Gene position: 3357969-3358757 (Clockwise)

Preceding gene: 91789031

Following gene: 91789033

Centisome position: 64.57

GC content: 62.86

Gene sequence:

>789_bases
TTGCCTGCTGCACTGGTGCTGAGGTTCAAAAGCCTGGGCAGTGGCAGTTCGGGCAATGCCACACTGGTGGAGGCCTTGGG
CCTGCTGCCCTTTCGGGTGCTCATTGACTGCGGGCTGGGGCTCAAGCACCTCGTGTACCGGCTGGGCCAGGCCGGGCTTC
AACCAGAAGACATCGACGCAGTCTTCATTACCCACGAGCATGGCGACCACATTGGTTGCGCGCGTTCGCTGTCCCTGCGT
TACCGCATCCCCGTCTGGATGAGCCACGGCACCCATGCCGCTACCGGCTCACCGGATTTTGACGGCCTGCTCCGCACGGC
CAGAGATGGTGAAACCATTGAGCTTGGCGGACTTCAGCTCACCCCCTTCACCGTACCGCATGATGCCAGGGAGCCCTTGC
AACTCACCTGCACCGATGGCTCGGCGAAGCTGGGAATTTTGACGGACCTGGGACATGCGACGGCACACGTCATCGCGCAC
CTGAAGGCCTGCGATGCGCTGCTGCTGGAGTGCAACCACGACACCGAGATGCTGGCCCAATCGGCCTATCCCGCATTTCT
GAAGCGACGGGTCGGCGGCCAGTACGGCCACCTTGCCAACGCCGCAGCGGCAGACATCGCCCGCGCCGTGCGGCACCCCG
GCCTCAAGCATCTGGTGGCAGCCCATTTAAGCGCACAAAACAACCGGCCTGCGCTGGTTCAGGACGTAATGGCAGAGGCT
TTGTCGTGCGCGCCAGAGGACATCATCGTTGCGAAACCCGATGACGGAAGCTGCTGGCTCCAGATCTGA

Upstream 100 bases:

>100_bases
TCAATGCCCAGGGCGCGCCTGAATCGTCCGCCAATGCCAAGCGCATTGTTCAGGTGATTGCCGACGACCTGAAATAAGGC
CGCGGTTTGCAGCTCCATCA

Downstream 100 bases:

>100_bases
CAACGCAACATGACGAAGCAACGATTCCCGGGGTCTTGGCAAGCCTCCAGGAAATCATGAGCAAAAAAAAGCCGCCTTGC
AGCGGCTTTTTTCAACTCGC

Product: beta-lactamase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MPAALVLRFKSLGSGSSGNATLVEALGLLPFRVLIDCGLGLKHLVYRLGQAGLQPEDIDAVFITHEHGDHIGCARSLSLR
YRIPVWMSHGTHAATGSPDFDGLLRTARDGETIELGGLQLTPFTVPHDAREPLQLTCTDGSAKLGILTDLGHATAHVIAH
LKACDALLLECNHDTEMLAQSAYPAFLKRRVGGQYGHLANAAAADIARAVRHPGLKHLVAAHLSAQNNRPALVQDVMAEA
LSCAPEDIIVAKPDDGSCWLQI

Sequences:

>Translated_262_residues
MPAALVLRFKSLGSGSSGNATLVEALGLLPFRVLIDCGLGLKHLVYRLGQAGLQPEDIDAVFITHEHGDHIGCARSLSLR
YRIPVWMSHGTHAATGSPDFDGLLRTARDGETIELGGLQLTPFTVPHDAREPLQLTCTDGSAKLGILTDLGHATAHVIAH
LKACDALLLECNHDTEMLAQSAYPAFLKRRVGGQYGHLANAAAADIARAVRHPGLKHLVAAHLSAQNNRPALVQDVMAEA
LSCAPEDIIVAKPDDGSCWLQI
>Mature_261_residues
PAALVLRFKSLGSGSSGNATLVEALGLLPFRVLIDCGLGLKHLVYRLGQAGLQPEDIDAVFITHEHGDHIGCARSLSLRY
RIPVWMSHGTHAATGSPDFDGLLRTARDGETIELGGLQLTPFTVPHDAREPLQLTCTDGSAKLGILTDLGHATAHVIAHL
KACDALLLECNHDTEMLAQSAYPAFLKRRVGGQYGHLANAAAADIARAVRHPGLKHLVAAHLSAQNNRPALVQDVMAEAL
SCAPEDIIVAKPDDGSCWLQI

Specific function: Unknown

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 27897; Mature: 27766

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAALVLRFKSLGSGSSGNATLVEALGLLPFRVLIDCGLGLKHLVYRLGQAGLQPEDIDA
CCHHEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCE
VFITHEHGDHIGCARSLSLRYRIPVWMSHGTHAATGSPDFDGLLRTARDGETIELGGLQL
EEEEECCCCCCCHHHCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEECCEEE
TPFTVPHDAREPLQLTCTDGSAKLGILTDLGHATAHVIAHLKACDALLLECNHDTEMLAQ
ECEECCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHEEECCCCHHHHHH
SAYPAFLKRRVGGQYGHLANAAAADIARAVRHPGLKHLVAAHLSAQNNRPALVQDVMAEA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
LSCAPEDIIVAKPDDGSCWLQI
HHCCCCCEEEECCCCCCEEEEC
>Mature Secondary Structure 
PAALVLRFKSLGSGSSGNATLVEALGLLPFRVLIDCGLGLKHLVYRLGQAGLQPEDIDA
CHHEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCE
VFITHEHGDHIGCARSLSLRYRIPVWMSHGTHAATGSPDFDGLLRTARDGETIELGGLQL
EEEEECCCCCCCHHHCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEECCEEE
TPFTVPHDAREPLQLTCTDGSAKLGILTDLGHATAHVIAHLKACDALLLECNHDTEMLAQ
ECEECCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHEEECCCCHHHHHH
SAYPAFLKRRVGGQYGHLANAAAADIARAVRHPGLKHLVAAHLSAQNNRPALVQDVMAEA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
LSCAPEDIIVAKPDDGSCWLQI
HHCCCCCEEEECCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]