| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789026
Identifier: 91789026
GI number: 91789026
Start: 3351691
End: 3352728
Strand: Direct
Name: 91789026
Synonym: Bpro_3166
Alternate gene names: NA
Gene position: 3351691-3352728 (Clockwise)
Preceding gene: 91789022
Following gene: 91789027
Centisome position: 64.45
GC content: 60.5
Gene sequence:
>1038_bases ATGAATATAAGGGGTATCCGCTTAGCTCCAGTGGAGTCGGATATACTGGATAAATACCCAGTTATTATGCCAGTTCCAGC CCAAGACTACCCCCGCACCTGGAGCGAATTCCTCGATTGGTTTTCCTCCGAGGAGGCTTGCCTGTCTTACCTGGAGCGCT TGCGCTGGCCGCACGGCTTCGCCTGCCCAAATTGCGCCAGCATGGCGGCGCCATACCGATCCAGCCGCACGCGATTGATG TGCCAGGACTGTGGGCGACAGACGACCGTGACCTCGGGCACCATCTTTGACAAGACCCGTACGCCGCTAAAGGTATGGCT GGCGGCGGCGTGGTATCTCACCAGCCAGAAGCAAGGTGTCAGCGCCCTAGGCTTGCAGCGGGTGTTGGGGCTGGGCAGCT ACCAGACGGCCTGGACCATGCTGCACCGCTTTCGCTGTGCCATGGTGCGCCCGGATCGGGAACGCCTGAAAGGTCTGGTC GAGGTGGATGAAACCTACCTGGCCATCTCGGACCGACAGCAGCCCATCTCTGCCGTGGGTCGCAAGAGCCGCACCAGCAA AGTACTGGTGGTGATGGCCGTGGAGATACTGCAGCCCAAAGGATTTGGCCGGATTCGTCTGCACCGCATCGCCAATGATT CTGACGAATGCGTGGTGCCGTTTGTCCAGCAGTCGGTGGAGCCCGGCGCCCAGATTCGCACTGACGGCTCGGCCGCCTAT CGTTCGCTCAGCGAGCTGGGCTATGACCATGAGCGCACGGTCATGCTGGGCTCGGATGTTCCTGCCCATGTCTCCATGGC AGGGGTGCATCGGGTGGCCTCACTGGTCAAGCGCTGGATCCTGGGCACGCACCATGGCTCGGTCCAGCCCGAGCATCTGG ATGCCTACCTGGATGAGTTTGTCTTTCGCTTCAATCGCCGCACTTCGGGCTCTCGCGGGATGCTGTTTTACCGGCTGCTG CAGCAAGCCGTTGTCACGAAACCCGTGACCTATCAGGACATCACCCGAACAACACAGGACATGGTGGAATCGGTCTAG
Upstream 100 bases:
>100_bases TGGAGCCTTCGGAATATTCGTTGCTTGCGGTAGATAGTTTGTCGGCCATGGCTGATGAGGAAATTGCGGCAATTGTAGAC CGGGCCGCAAAAGTAACTGT
Downstream 100 bases:
>100_bases TGGAGCTAAGCGGATACCCCTTATGAATATACAGCCATACTAACCGAACCCGCCGGGTCGAACGGTTCCGCCTCGCGGCG CACCGCCCGGCCGCCAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MNIRGIRLAPVESDILDKYPVIMPVPAQDYPRTWSEFLDWFSSEEACLSYLERLRWPHGFACPNCASMAAPYRSSRTRLM CQDCGRQTTVTSGTIFDKTRTPLKVWLAAAWYLTSQKQGVSALGLQRVLGLGSYQTAWTMLHRFRCAMVRPDRERLKGLV EVDETYLAISDRQQPISAVGRKSRTSKVLVVMAVEILQPKGFGRIRLHRIANDSDECVVPFVQQSVEPGAQIRTDGSAAY RSLSELGYDHERTVMLGSDVPAHVSMAGVHRVASLVKRWILGTHHGSVQPEHLDAYLDEFVFRFNRRTSGSRGMLFYRLL QQAVVTKPVTYQDITRTTQDMVESV
Sequences:
>Translated_345_residues MNIRGIRLAPVESDILDKYPVIMPVPAQDYPRTWSEFLDWFSSEEACLSYLERLRWPHGFACPNCASMAAPYRSSRTRLM CQDCGRQTTVTSGTIFDKTRTPLKVWLAAAWYLTSQKQGVSALGLQRVLGLGSYQTAWTMLHRFRCAMVRPDRERLKGLV EVDETYLAISDRQQPISAVGRKSRTSKVLVVMAVEILQPKGFGRIRLHRIANDSDECVVPFVQQSVEPGAQIRTDGSAAY RSLSELGYDHERTVMLGSDVPAHVSMAGVHRVASLVKRWILGTHHGSVQPEHLDAYLDEFVFRFNRRTSGSRGMLFYRLL QQAVVTKPVTYQDITRTTQDMVESV >Mature_345_residues MNIRGIRLAPVESDILDKYPVIMPVPAQDYPRTWSEFLDWFSSEEACLSYLERLRWPHGFACPNCASMAAPYRSSRTRLM CQDCGRQTTVTSGTIFDKTRTPLKVWLAAAWYLTSQKQGVSALGLQRVLGLGSYQTAWTMLHRFRCAMVRPDRERLKGLV EVDETYLAISDRQQPISAVGRKSRTSKVLVVMAVEILQPKGFGRIRLHRIANDSDECVVPFVQQSVEPGAQIRTDGSAAY RSLSELGYDHERTVMLGSDVPAHVSMAGVHRVASLVKRWILGTHHGSVQPEHLDAYLDEFVFRFNRRTSGSRGMLFYRLL QQAVVTKPVTYQDITRTTQDMVESV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003220 [H]
Pfam domain/function: PF03811 Ins_element1 [H]
EC number: NA
Molecular weight: Translated: 39074; Mature: 39074
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIRGIRLAPVESDILDKYPVIMPVPAQDYPRTWSEFLDWFSSEEACLSYLERLRWPHGF CCCCCEEECCCCHHHHCCCCCEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCC ACPNCASMAAPYRSSRTRLMCQDCGRQTTVTSGTIFDKTRTPLKVWLAAAWYLTSQKQGV CCCCHHHHCCCCCCCCHHHHHHHCCCCEEECCCCEECCCCCHHHHHHHHHHHHHCCCCCH SALGLQRVLGLGSYQTAWTMLHRFRCAMVRPDRERLKGLVEVDETYLAISDRQQPISAVG HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHEEEECCCCCHHHHHC RKSRTSKVLVVMAVEILQPKGFGRIRLHRIANDSDECVVPFVQQSVEPGAQIRTDGSAAY CCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEHHHHHHCCCCCCEEECCHHHHH RSLSELGYDHERTVMLGSDVPAHVSMAGVHRVASLVKRWILGTHHGSVQPEHLDAYLDEF HHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH VFRFNRRTSGSRGMLFYRLLQQAVVTKPVTYQDITRTTQDMVESV HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MNIRGIRLAPVESDILDKYPVIMPVPAQDYPRTWSEFLDWFSSEEACLSYLERLRWPHGF CCCCCEEECCCCHHHHCCCCCEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCC ACPNCASMAAPYRSSRTRLMCQDCGRQTTVTSGTIFDKTRTPLKVWLAAAWYLTSQKQGV CCCCHHHHCCCCCCCCHHHHHHHCCCCEEECCCCEECCCCCHHHHHHHHHHHHHCCCCCH SALGLQRVLGLGSYQTAWTMLHRFRCAMVRPDRERLKGLVEVDETYLAISDRQQPISAVG HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHEEEECCCCCHHHHHC RKSRTSKVLVVMAVEILQPKGFGRIRLHRIANDSDECVVPFVQQSVEPGAQIRTDGSAAY CCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEHHHHHHCCCCCCEEECCHHHHH RSLSELGYDHERTVMLGSDVPAHVSMAGVHRVASLVKRWILGTHHGSVQPEHLDAYLDEF HHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH VFRFNRRTSGSRGMLFYRLLQQAVVTKPVTYQDITRTTQDMVESV HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6306577; 9847077; 11016950 [H]