Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789022

Identifier: 91789022

GI number: 91789022

Start: 3345719

End: 3346186

Strand: Direct

Name: 91789022

Synonym: Bpro_3162

Alternate gene names: NA

Gene position: 3345719-3346186 (Clockwise)

Preceding gene: 91789021

Following gene: 91789026

Centisome position: 64.34

GC content: 62.18

Gene sequence:

>468_bases
ATGAGTACCACCCCGCACAATGCCCACGACAAGCTCAAAGCCCTGAACATCACGCTGCCTGCCGTGGCCGTCCCTGCCGC
AGCCTATCTGCCCTTTGTACAAACCGGCAACCTGGTGTTCCTGAGCGGCCACCTTGCCAAAAAAGACGGCAAGGTCATCG
TCGGCCAGTTGGGCAAAAACCTGAGCACCGAGGAAGGCAAGGCCGCGGCACGCGCCGTTGCCATCGACCTGATGGGCACG
CTGGAAGCGGCCGTCGGCCTGGGCAAGGTCAAGCGCATCGTCAAGCTCATGAGCCTGGTCAACTCGACCAGCGACTTCAC
CGAGCAGCACCTGGTCACCAACGGCGCGAGTGAATTGCTGGGAGAAGTGTTTGGCGATGCCGGCAAACACGCCCGCAGCG
CTTTCGGCGTGGCACAAATCCCGATGGGCGCCTGCGTTGAGATCGAGCTGATTGCCGAGGTGGCCTGA

Upstream 100 bases:

>100_bases
ATCGTTTTAGCAGCAATCGACGCCTGCTTTCATGCGGCAGCTGGCACGTTTCATCCCTGAAAACTTCACCCCCTGCACAT
TCCATCCCCCGGAGAACACC

Downstream 100 bases:

>100_bases
GCTCACTCAGGCGCCCCACAGCAAGACTTATTCCACCCGGACAATACCCGTCGGTTTGAAGCCCAGGTCGGCCGCCTTGC
CTTTGCGGGCACGCGCCGCA

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Endoribonuclease; Endoribonuclease L-Psp; Transcriptional Regulator; Translation Initiation Inhibitor YjgF Family; Transcription Regulator; Endoribonuclease L-PSP Superfamily; Translation Initiation Inhibitor Protein; Endoribonuclease Family Protein; L-PSP Family Endoribonuclease; Endoribonuclease L-PSP Family; Translation Initiation Inhibitor Protein YjgF Family; 2-Aminomuconate Deaminase; YjgF-Family Protein; Peptidase C; Creatininase; Translation Initiation Inhibitor YjgF; YjgF Family Translation Initiation Inhibitor; Endoribonuclease-L-PSP Family Protein

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MSTTPHNAHDKLKALNITLPAVAVPAAAYLPFVQTGNLVFLSGHLAKKDGKVIVGQLGKNLSTEEGKAAARAVAIDLMGT
LEAAVGLGKVKRIVKLMSLVNSTSDFTEQHLVTNGASELLGEVFGDAGKHARSAFGVAQIPMGACVEIELIAEVA

Sequences:

>Translated_155_residues
MSTTPHNAHDKLKALNITLPAVAVPAAAYLPFVQTGNLVFLSGHLAKKDGKVIVGQLGKNLSTEEGKAAARAVAIDLMGT
LEAAVGLGKVKRIVKLMSLVNSTSDFTEQHLVTNGASELLGEVFGDAGKHARSAFGVAQIPMGACVEIELIAEVA
>Mature_154_residues
STTPHNAHDKLKALNITLPAVAVPAAAYLPFVQTGNLVFLSGHLAKKDGKVIVGQLGKNLSTEEGKAAARAVAIDLMGTL
EAAVGLGKVKRIVKLMSLVNSTSDFTEQHLVTNGASELLGEVFGDAGKHARSAFGVAQIPMGACVEIELIAEVA

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16042; Mature: 15911

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTPHNAHDKLKALNITLPAVAVPAAAYLPFVQTGNLVFLSGHLAKKDGKVIVGQLGKN
CCCCCCCCHHHHEEEEEECCHHHHHHHHHCCEEECCCEEEEECCEECCCCCEEEECCCCC
LSTEEGKAAARAVAIDLMGTLEAAVGLGKVKRIVKLMSLVNSTSDFTEQHLVTNGASELL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHH
GEVFGDAGKHARSAFGVAQIPMGACVEIELIAEVA
HHHHCCCCHHHHHHCCHHCCCCCCEEEEEEEEECC
>Mature Secondary Structure 
STTPHNAHDKLKALNITLPAVAVPAAAYLPFVQTGNLVFLSGHLAKKDGKVIVGQLGKN
CCCCCCCHHHHEEEEEECCHHHHHHHHHCCEEECCCEEEEECCEECCCCCEEEECCCCC
LSTEEGKAAARAVAIDLMGTLEAAVGLGKVKRIVKLMSLVNSTSDFTEQHLVTNGASELL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHH
GEVFGDAGKHARSAFGVAQIPMGACVEIELIAEVA
HHHHCCCCHHHHHHCCHHCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA