| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yeaC [H]
Identifier: 91789006
GI number: 91789006
Start: 3321711
End: 3322631
Strand: Direct
Name: yeaC [H]
Synonym: Bpro_3146
Alternate gene names: 91789006
Gene position: 3321711-3322631 (Clockwise)
Preceding gene: 91788998
Following gene: 91789007
Centisome position: 63.88
GC content: 65.36
Gene sequence:
>921_bases ATGAACGTCAAAGAAAAACTTCAAGCGCTCCTGAATCAGCTTAACACGGTCATTGTCGGCAAGTCCTCACAAGTGCAAGA CTGTGTAGCCTGCCTGCTCGCAGGGGGTCATCTGCTGATTGAAGACGTTCCCGGCGTGGGTAAAACCACCCTGGCCCATG CGCTGTCGCGCTCGTTCGGCCTGCAGTTTTCCCGCGTGCAATTCACGGCCGATTTGATGCCCAGCGATTTGTCGGGCGTC TCGATCTACGAGCGCCAGAAGGAAAGTTTTGTCTTCCATCCCGGCCCCGTGTTCGCCCAGGTGCTGCTGGCCGACGAAAT CAACCGGGCCAGCCCCAAGACCCAGAGCGCGCTGCTGGAGGCCATGGAAGAAAAGCAGGTCACCGTGGAAGGCGAAACGC GCCCCCTGCCCGTGCCCTTTTTTGTCATCGCCACGCAAAACCCGCACGACCAGCTGGGCACCTATGCCCTGCCCGAGTCG CAGCTGGACCGTTTTCACATGCGTATCTCGCTGGGCTACCCCGACCGCGCGGCCGAACGCGAGCTGCTCCGGGGCGGCGA CCGGCGCGAGATGGTCGACAAGCTGCCGGCACTGCTGGCGCCGCACGACCTGCTGGAGCTGCAACAGCTGGTCGCGCAGG TGCATGCCGCGGACCCCTTGCTGAACTATCTGCAGGACCTGGTGGCGGCCACGCGCTCGGGGCGCTGGTTTCTGCAGGGC CTGAGCCCGCGGGCCGGCATCGCCGTCATGCGCGCCGCCAGGGCGCAGGCCTTCCTGGACGGCCGCGACTATGTCGCCCC CGACGACATCGCCGCCGTGCTGCCGCAGACCGCAGCGCACCGCCTCATTCCCGTCAGCGATGCCGGCCGCGGCTCCGTGG AACAGGTACGCGCCATGCTGGAAGCCGTGCCCTTGCCATGA
Upstream 100 bases:
>100_bases TTCGGGATGCCCCGGACCCATCTCGTGCATCCGGCAGTCTTTGTGAGTGAAATAACCAGTCGCGTTCATAGCATGAAAAT TTTGCGGTAAGGTTGACGAC
Downstream 100 bases:
>100_bases AAGAGCTTTGTCATTGCGGACTTGATCCGCAATCCACCGCCGCAACAGCCTGGATTCCGGCTCAAGGCCGGAATGACAAA CGATGAATACGGCCATCATC
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MNVKEKLQALLNQLNTVIVGKSSQVQDCVACLLAGGHLLIEDVPGVGKTTLAHALSRSFGLQFSRVQFTADLMPSDLSGV SIYERQKESFVFHPGPVFAQVLLADEINRASPKTQSALLEAMEEKQVTVEGETRPLPVPFFVIATQNPHDQLGTYALPES QLDRFHMRISLGYPDRAAERELLRGGDRREMVDKLPALLAPHDLLELQQLVAQVHAADPLLNYLQDLVAATRSGRWFLQG LSPRAGIAVMRAARAQAFLDGRDYVAPDDIAAVLPQTAAHRLIPVSDAGRGSVEQVRAMLEAVPLP
Sequences:
>Translated_306_residues MNVKEKLQALLNQLNTVIVGKSSQVQDCVACLLAGGHLLIEDVPGVGKTTLAHALSRSFGLQFSRVQFTADLMPSDLSGV SIYERQKESFVFHPGPVFAQVLLADEINRASPKTQSALLEAMEEKQVTVEGETRPLPVPFFVIATQNPHDQLGTYALPES QLDRFHMRISLGYPDRAAERELLRGGDRREMVDKLPALLAPHDLLELQQLVAQVHAADPLLNYLQDLVAATRSGRWFLQG LSPRAGIAVMRAARAQAFLDGRDYVAPDDIAAVLPQTAAHRLIPVSDAGRGSVEQVRAMLEAVPLP >Mature_306_residues MNVKEKLQALLNQLNTVIVGKSSQVQDCVACLLAGGHLLIEDVPGVGKTTLAHALSRSFGLQFSRVQFTADLMPSDLSGV SIYERQKESFVFHPGPVFAQVLLADEINRASPKTQSALLEAMEEKQVTVEGETRPLPVPFFVIATQNPHDQLGTYALPES QLDRFHMRISLGYPDRAAERELLRGGDRREMVDKLPALLAPHDLLELQQLVAQVHAADPLLNYLQDLVAATRSGRWFLQG LSPRAGIAVMRAARAQAFLDGRDYVAPDDIAAVLPQTAAHRLIPVSDAGRGSVEQVRAMLEAVPLP
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 33434; Mature: 33434
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVKEKLQALLNQLNTVIVGKSSQVQDCVACLLAGGHLLIEDVPGVGKTTLAHALSRSFG CCHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHC LQFSRVQFTADLMPSDLSGVSIYERQKESFVFHPGPVFAQVLLADEINRASPKTQSALLE CEEHHEEEEHHCCCCCCCCCHHHHHHHHCEEECCCHHHHHHHHHHHHHCCCCHHHHHHHH AMEEKQVTVEGETRPLPVPFFVIATQNPHDQLGTYALPESQLDRFHMRISLGYPDRAAER HHHHCCEEECCCCCCCCCCEEEEECCCCHHHHCCCCCCHHHHHHEEEEEEECCCCHHHHH ELLRGGDRREMVDKLPALLAPHDLLELQQLVAQVHAADPLLNYLQDLVAATRSGRWFLQG HHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC LSPRAGIAVMRAARAQAFLDGRDYVAPDDIAAVLPQTAAHRLIPVSDAGRGSVEQVRAML CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCEEECCCCCCCCHHHHHHHH EAVPLP HHCCCC >Mature Secondary Structure MNVKEKLQALLNQLNTVIVGKSSQVQDCVACLLAGGHLLIEDVPGVGKTTLAHALSRSFG CCHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHC LQFSRVQFTADLMPSDLSGVSIYERQKESFVFHPGPVFAQVLLADEINRASPKTQSALLE CEEHHEEEEHHCCCCCCCCCHHHHHHHHCEEECCCHHHHHHHHHHHHHCCCCHHHHHHHH AMEEKQVTVEGETRPLPVPFFVIATQNPHDQLGTYALPESQLDRFHMRISLGYPDRAAER HHHHCCEEECCCCCCCCCCEEEEECCCCHHHHCCCCCCHHHHHHEEEEEEECCCCHHHHH ELLRGGDRREMVDKLPALLAPHDLLELQQLVAQVHAADPLLNYLQDLVAATRSGRWFLQG HHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC LSPRAGIAVMRAARAQAFLDGRDYVAPDDIAAVLPQTAAHRLIPVSDAGRGSVEQVRAML CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCEEECCCCCCCCHHHHHHHH EAVPLP HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]