Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788998

Identifier: 91788998

GI number: 91788998

Start: 3312618

End: 3312992

Strand: Direct

Name: 91788998

Synonym: Bpro_3138

Alternate gene names: NA

Gene position: 3312618-3312992 (Clockwise)

Preceding gene: 91788997

Following gene: 91789006

Centisome position: 63.7

GC content: 62.67

Gene sequence:

>375_bases
ATGCATTCACTTTCGGCCATCCATCCCATGACCAAGCGCCCCGAAAACGTCCACGACCGCTACCACGCCCATGTTTATTT
TGGCCCCGCCACCGTGGCGCAGGCCCGAGCGCTGTGCGAGCAGGCAGGTGAGCTGTTCGGGGTGGCCGTCGGCCGTGTGC
ATGAACGTGAGATTGGGCCGCACCCGCACTGGAGCTGCCAGCTGGCATTTGACCGCGTCCAGTTTGAGCGCCTGATCCCG
TGGCTGGCACAAAACCGCAACGGGCTTGATGTGTTCGTGCACGGGGTCACGGGCGATAACCTGGCCGATCACACGACCCA
TGCCTCCTGGCTGGGCGAGGCCTCTGAATTGAAGCTGGACATGTTCAGGCGTTGA

Upstream 100 bases:

>100_bases
GCGGCAAGATCCGGCGGTTTCCCTGCCCGAGATGATCTTTCTGGAGGGCCTGTAAACCCCGCAGTCGCGGCGGGCAAAGC
GGATGACAGGACAATCGCCC

Downstream 100 bases:

>100_bases
GCGGGAGGCCTGAAACGCTATTGATTTGATTGCGGACCTGGACGGGGCGAAGAGTCACAGTGTCTCACTGCAACACGTGG
GGCTGGGATGGGGGCGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Dopa 4 5-Dioxygenase Family Protein; Aromatic Ring-Cleaving Dioxygenase-Like Protein; Dioxygenase; Aromatic Ring-Cleaving Dioxygenase; DOPA 4 5-Dioxygenase; DOPA-Dioxygenase-Related Protein; Aromatic Ring-Cleaving Dioxygenase-Like; Dopa 4 5-Dioxygenase Family; DOPA-Dioxygenase-Like Protein; DOPA 4 5-Dioxygenase-Related Protein

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MHSLSAIHPMTKRPENVHDRYHAHVYFGPATVAQARALCEQAGELFGVAVGRVHEREIGPHPHWSCQLAFDRVQFERLIP
WLAQNRNGLDVFVHGVTGDNLADHTTHASWLGEASELKLDMFRR

Sequences:

>Translated_124_residues
MHSLSAIHPMTKRPENVHDRYHAHVYFGPATVAQARALCEQAGELFGVAVGRVHEREIGPHPHWSCQLAFDRVQFERLIP
WLAQNRNGLDVFVHGVTGDNLADHTTHASWLGEASELKLDMFRR
>Mature_124_residues
MHSLSAIHPMTKRPENVHDRYHAHVYFGPATVAQARALCEQAGELFGVAVGRVHEREIGPHPHWSCQLAFDRVQFERLIP
WLAQNRNGLDVFVHGVTGDNLADHTTHASWLGEASELKLDMFRR

Specific function: Unknown

COG id: COG3805

COG function: function code Q; Aromatic ring-cleaving dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14070; Mature: 14070

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSLSAIHPMTKRPENVHDRYHAHVYFGPATVAQARALCEQAGELFGVAVGRVHEREIGP
CCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
HPHWSCQLAFDRVQFERLIPWLAQNRNGLDVFVHGVTGDNLADHTTHASWLGEASELKLD
CCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHCCCHHHHHHH
MFRR
HHCC
>Mature Secondary Structure
MHSLSAIHPMTKRPENVHDRYHAHVYFGPATVAQARALCEQAGELFGVAVGRVHEREIGP
CCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
HPHWSCQLAFDRVQFERLIPWLAQNRNGLDVFVHGVTGDNLADHTTHASWLGEASELKLD
CCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHCCCHHHHHHH
MFRR
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA