| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is flhA [H]
Identifier: 91788989
GI number: 91788989
Start: 3304080
End: 3305186
Strand: Direct
Name: flhA [H]
Synonym: Bpro_3129
Alternate gene names: 91788989
Gene position: 3304080-3305186 (Clockwise)
Preceding gene: 91788988
Following gene: 91788990
Centisome position: 63.54
GC content: 61.61
Gene sequence:
>1107_bases ATGAAAACCAAAGCCGCCGTCGCCTGGAAAGCGGGCCAACCCCTGACCATTGAAACCGTCGATCTTGAAGGCCCGAAGTT CGGCGAGGTGCTGGTCGAGATCAAGGCCACCGGTATTTGCCACACCGACTACTACACGCTGTCGGGCGCCGATCCGGAAG GCATCTTCCCGGCCATTCTGGGCCATGAAGGCGCGGGCATCGTGGTCGATGTTGGCCCCGGCGTGACCACGCTCAAGAAG GGCGACCACGTCATTCCGCTCTACACGCCGGAATGCCGCCAGTGCAAGTTCTGCCTGAGCCGCAAGACCAATCTGTGCCA GCTGATTCGTGGCACGCAGGGCAAGGGCCTGATGCCCGACGCCACCAGCCGCTTCAGCCTGGACTGCCAACCCATCTTCC ACTACATGGGCACCAGCACCTTCAGCAACTACACGGTGGCGCCCGGAATTTCGCTGGCCAAAATCCGTGAAGACGCACCG TTTGACAAGGTCTGCTACATCGGCTGCGGCGTCACCACCGGCATCGGTGCGGTGATCTTCACCGCCAAGGTGGAAGCCGG CGCCAACGTGGTGATCTTCGGCCTGGGCGGCATTGGCCTGAACGTGATCCAGGGCGCGAAGATGGTGGGCGCCGACAAGA TCATCGGCGTGGACATCAACCCCGCGCGGCAGGAGATGGCACGCAAATTCGGCATGACGCATTTCATCAACCCCAAGGAA ACAGACAACGTGGTCGATGCCATCGTGCAGCTGACCGATGGCGGCGCCGACTACAGCTTTGAATGCATAGGCAACACGAA AGTCATGCGGCAGGCGCTGGAATGCACCCACAAGGGCTGGGGCCGCAGCATCATCATCGGCGTGGCCGAGGCCGGCGCCG AAATCAGCACCCGCCCCTTCCAGCTGGTCACCGGCCGCAAGTGGGAAGGCTCAGCCTTTGGTGGCGCGCGCGGCCGCACC GATGTGCCCAAGATCGTCGACTGGTACATGGACGGCAAGATCAACATCGACGACCTGATCACCCACACCATGCCGCTGGA AGACATCAACAAGGGCTTCGATTTGATGAAGCGTGGCGAGTCGATTCGCGGCGTGGTCATTTACTAG
Upstream 100 bases:
>100_bases CCAGGGCGCTGCCAGGCAATAGCTGGCTTATAGTGCCGGGTAACCCTTTACCCACCCTCTTTCCCACCTTCTTTCGCGCT ACGCAGAAGCCATCACCACC
Downstream 100 bases:
>100_bases CCCCCACGTTCGCTCTACTAGCGTGTAGCTCTCTGCCCCCTCAGGGGGCGCTGCGCCTGCGGTCTGGCAAAGCCAGTCCC GCGGCCCCTGCTGGTGAAGA
Product: zinc-binding alcohol dehydrogenase
Products: NA
Alternate protein names: Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH [H]
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MKTKAAVAWKAGQPLTIETVDLEGPKFGEVLVEIKATGICHTDYYTLSGADPEGIFPAILGHEGAGIVVDVGPGVTTLKK GDHVIPLYTPECRQCKFCLSRKTNLCQLIRGTQGKGLMPDATSRFSLDCQPIFHYMGTSTFSNYTVAPGISLAKIREDAP FDKVCYIGCGVTTGIGAVIFTAKVEAGANVVIFGLGGIGLNVIQGAKMVGADKIIGVDINPARQEMARKFGMTHFINPKE TDNVVDAIVQLTDGGADYSFECIGNTKVMRQALECTHKGWGRSIIIGVAEAGAEISTRPFQLVTGRKWEGSAFGGARGRT DVPKIVDWYMDGKINIDDLITHTMPLEDINKGFDLMKRGESIRGVVIY
Sequences:
>Translated_368_residues MKTKAAVAWKAGQPLTIETVDLEGPKFGEVLVEIKATGICHTDYYTLSGADPEGIFPAILGHEGAGIVVDVGPGVTTLKK GDHVIPLYTPECRQCKFCLSRKTNLCQLIRGTQGKGLMPDATSRFSLDCQPIFHYMGTSTFSNYTVAPGISLAKIREDAP FDKVCYIGCGVTTGIGAVIFTAKVEAGANVVIFGLGGIGLNVIQGAKMVGADKIIGVDINPARQEMARKFGMTHFINPKE TDNVVDAIVQLTDGGADYSFECIGNTKVMRQALECTHKGWGRSIIIGVAEAGAEISTRPFQLVTGRKWEGSAFGGARGRT DVPKIVDWYMDGKINIDDLITHTMPLEDINKGFDLMKRGESIRGVVIY >Mature_368_residues MKTKAAVAWKAGQPLTIETVDLEGPKFGEVLVEIKATGICHTDYYTLSGADPEGIFPAILGHEGAGIVVDVGPGVTTLKK GDHVIPLYTPECRQCKFCLSRKTNLCQLIRGTQGKGLMPDATSRFSLDCQPIFHYMGTSTFSNYTVAPGISLAKIREDAP FDKVCYIGCGVTTGIGAVIFTAKVEAGANVVIFGLGGIGLNVIQGAKMVGADKIIGVDINPARQEMARKFGMTHFINPKE TDNVVDAIVQLTDGGADYSFECIGNTKVMRQALECTHKGWGRSIIIGVAEAGAEISTRPFQLVTGRKWEGSAFGGARGRT DVPKIVDWYMDGKINIDDLITHTMPLEDINKGFDLMKRGESIRGVVIY
Specific function: Essential for the oxidation of formaldehyde produced during methylotrophic growth [H]
COG id: COG1062
COG function: function code C; Zn-dependent alcohol dehydrogenases, class III
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily [H]
Homologues:
Organism=Homo sapiens, GI71565154, Length=367, Percent_Identity=60.4904632152589, Blast_Score=445, Evalue=1e-125, Organism=Homo sapiens, GI71565152, Length=373, Percent_Identity=45.8445040214477, Blast_Score=353, Evalue=1e-97, Organism=Homo sapiens, GI34577061, Length=369, Percent_Identity=44.4444444444444, Blast_Score=332, Evalue=3e-91, Organism=Homo sapiens, GI262073058, Length=370, Percent_Identity=44.3243243243243, Blast_Score=327, Evalue=1e-89, Organism=Homo sapiens, GI71743840, Length=370, Percent_Identity=44.3243243243243, Blast_Score=327, Evalue=1e-89, Organism=Homo sapiens, GI4501933, Length=369, Percent_Identity=43.9024390243902, Blast_Score=326, Evalue=2e-89, Organism=Homo sapiens, GI4501929, Length=369, Percent_Identity=43.9024390243902, Blast_Score=323, Evalue=2e-88, Organism=Homo sapiens, GI156523966, Length=368, Percent_Identity=42.3913043478261, Blast_Score=314, Evalue=9e-86, Organism=Homo sapiens, GI4501939, Length=361, Percent_Identity=42.6592797783933, Blast_Score=308, Evalue=4e-84, Organism=Escherichia coli, GI1786552, Length=369, Percent_Identity=58.8075880758808, Blast_Score=432, Evalue=1e-122, Organism=Escherichia coli, GI87082125, Length=385, Percent_Identity=25.7142857142857, Blast_Score=111, Evalue=6e-26, Organism=Escherichia coli, GI1788073, Length=372, Percent_Identity=26.6129032258064, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1790045, Length=358, Percent_Identity=28.7709497206704, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI87081918, Length=367, Percent_Identity=29.1553133514986, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI226510992, Length=374, Percent_Identity=24.5989304812834, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1786825, Length=370, Percent_Identity=25.6756756756757, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI1787863, Length=349, Percent_Identity=24.3553008595989, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1788075, Length=378, Percent_Identity=27.5132275132275, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1786518, Length=367, Percent_Identity=24.5231607629428, Blast_Score=65, Evalue=9e-12, Organism=Caenorhabditis elegans, GI25146526, Length=373, Percent_Identity=54.6916890080429, Blast_Score=426, Evalue=1e-119, Organism=Caenorhabditis elegans, GI71997431, Length=375, Percent_Identity=54.4, Blast_Score=421, Evalue=1e-118, Organism=Caenorhabditis elegans, GI17565904, Length=343, Percent_Identity=54.2274052478134, Blast_Score=391, Evalue=1e-109, Organism=Caenorhabditis elegans, GI17562584, Length=367, Percent_Identity=28.3378746594005, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17562876, Length=355, Percent_Identity=26.7605633802817, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17562582, Length=359, Percent_Identity=25.9052924791086, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71988145, Length=374, Percent_Identity=26.2032085561497, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17562878, Length=356, Percent_Identity=25.561797752809, Blast_Score=80, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320033, Length=371, Percent_Identity=53.6388140161725, Blast_Score=422, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6319621, Length=373, Percent_Identity=28.686327077748, Blast_Score=105, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6323729, Length=365, Percent_Identity=27.3972602739726, Blast_Score=100, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6324486, Length=371, Percent_Identity=25.8760107816712, Blast_Score=100, Evalue=5e-22, Organism=Saccharomyces cerevisiae, GI6323961, Length=364, Percent_Identity=26.3736263736264, Blast_Score=99, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6323099, Length=371, Percent_Identity=28.8409703504043, Blast_Score=98, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6322619, Length=363, Percent_Identity=27.8236914600551, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6319955, Length=363, Percent_Identity=27.8236914600551, Blast_Score=91, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6319258, Length=361, Percent_Identity=26.8698060941828, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6319257, Length=354, Percent_Identity=24.8587570621469, Blast_Score=74, Evalue=3e-14, Organism=Drosophila melanogaster, GI17737895, Length=368, Percent_Identity=59.7826086956522, Blast_Score=463, Evalue=1e-131, Organism=Drosophila melanogaster, GI17137530, Length=340, Percent_Identity=27.9411764705882, Blast_Score=99, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014183 - InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.284 [H]
Molecular weight: Translated: 39583; Mature: 39583
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKAAVAWKAGQPLTIETVDLEGPKFGEVLVEIKATGICHTDYYTLSGADPEGIFPAIL CCCCCEEEEECCCCEEEEEEECCCCCCCEEEEEEEECEEEECCEEEECCCCCCCCCHHHC GHEGAGIVVDVGPGVTTLKKGDHVIPLYTPECRQCKFCLSRKTNLCQLIRGTQGKGLMPD CCCCCEEEEECCCCEEEECCCCEEEEEECCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCC ATSRFSLDCQPIFHYMGTSTFSNYTVAPGISLAKIREDAPFDKVCYIGCGVTTGIGAVIF CCCCEECCHHHHHHHHCCCCCCCEEECCCCCHHHHHCCCCCCCEEEEECCHHHCCCEEEE TAKVEAGANVVIFGLGGIGLNVIQGAKMVGADKIIGVDINPARQEMARKFGMTHFINPKE EEEECCCCCEEEEEECCCCHHHHCCCEEECCCEEEEECCCHHHHHHHHHHCCEECCCCCC TDNVVDAIVQLTDGGADYSFECIGNTKVMRQALECTHKGWGRSIIIGVAEAGAEISTRPF HHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCE QLVTGRKWEGSAFGGARGRTDVPKIVDWYMDGKINIDDLITHTMPLEDINKGFDLMKRGE EEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCHHHHHCCHHHHHCCC SIRGVVIY CCCEEEEC >Mature Secondary Structure MKTKAAVAWKAGQPLTIETVDLEGPKFGEVLVEIKATGICHTDYYTLSGADPEGIFPAIL CCCCCEEEEECCCCEEEEEEECCCCCCCEEEEEEEECEEEECCEEEECCCCCCCCCHHHC GHEGAGIVVDVGPGVTTLKKGDHVIPLYTPECRQCKFCLSRKTNLCQLIRGTQGKGLMPD CCCCCEEEEECCCCEEEECCCCEEEEEECCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCC ATSRFSLDCQPIFHYMGTSTFSNYTVAPGISLAKIREDAPFDKVCYIGCGVTTGIGAVIF CCCCEECCHHHHHHHHCCCCCCCEEECCCCCHHHHHCCCCCCCEEEEECCHHHCCCEEEE TAKVEAGANVVIFGLGGIGLNVIQGAKMVGADKIIGVDINPARQEMARKFGMTHFINPKE EEEECCCCCEEEEEECCCCHHHHCCCEEECCCEEEEECCCHHHHHHHHHHCCEECCCCCC TDNVVDAIVQLTDGGADYSFECIGNTKVMRQALECTHKGWGRSIIIGVAEAGAEISTRPF HHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCE QLVTGRKWEGSAFGGARGRTDVPKIVDWYMDGKINIDDLITHTMPLEDINKGFDLMKRGE EEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCHHHHHCCHHHHHCCC SIRGVVIY CCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7798140 [H]