| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is phaP [H]
Identifier: 91788948
GI number: 91788948
Start: 3256486
End: 3257028
Strand: Direct
Name: phaP [H]
Synonym: Bpro_3088
Alternate gene names: 91788948
Gene position: 3256486-3257028 (Clockwise)
Preceding gene: 91788935
Following gene: 91788952
Centisome position: 62.62
GC content: 58.38
Gene sequence:
>543_bases ATGTTGACCGCTGAACAAGTCCTGGCATCCCACAAAGCCAACATCGAAACCCTGTTTGGCCTGACCAGCAAAGCCTTCGA AGGCGTTGAGAAACTGGTCGAACTGAACGTGCAAGCCACCAAGGCTGCCCTGGCTGAAACCGCCAACCACACGCAAGCCG TCCTCGGCGCCAAAGACGCACAGGAACTGCTGGCCCTGCAAGCTGGCCTGGTTCAGCCCCTGGCCGAGAAAACCGCCGCT TACAGCCGCCACATCTATGACATCGCTACCGCTGCCAGCGCTGAACTGAGCAAGACCTTTGAAGGCCAGGCTGCTGACGC ACAGAAGAAATTTGTTGGCATCGTTGACAACGCCGCCAAGAACGCACCTGCCGGCTCCGAGACCGCAGTGGCCGTGATGA AAAGCGCCGTGGCTGCTGCCAACAACGCGTTTGAGTCCGTGCAAAAAGCCGTCAAGCAAGCCAGCGACATCGCCGAAGCC AACTTCAACACGGTGGCCGCCTCTGCCGTGAACGCTTCCAAGACTGTCTCCAAAAAGCGTTAA
Upstream 100 bases:
>100_bases CCTTCGTGTGGTCACTCCCTATAATTGGGCTTATGTTGCAGTGCAGCAATTCGGCGCAAAGCAACTACTGTCCCTCATCA ACCATATTGGAGATTAATTT
Downstream 100 bases:
>100_bases GTCGTCGGGGGACAAGCAGTTGCGCTGAGGGTCAACACTTTCCAGCGCAAACGCCCACCCTCACGGAGCCTGCTACCGAA ATCCTGTTTGACTGAACAGG
Product: phasin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MLTAEQVLASHKANIETLFGLTSKAFEGVEKLVELNVQATKAALAETANHTQAVLGAKDAQELLALQAGLVQPLAEKTAA YSRHIYDIATAASAELSKTFEGQAADAQKKFVGIVDNAAKNAPAGSETAVAVMKSAVAAANNAFESVQKAVKQASDIAEA NFNTVAASAVNASKTVSKKR
Sequences:
>Translated_180_residues MLTAEQVLASHKANIETLFGLTSKAFEGVEKLVELNVQATKAALAETANHTQAVLGAKDAQELLALQAGLVQPLAEKTAA YSRHIYDIATAASAELSKTFEGQAADAQKKFVGIVDNAAKNAPAGSETAVAVMKSAVAAANNAFESVQKAVKQASDIAEA NFNTVAASAVNASKTVSKKR >Mature_180_residues MLTAEQVLASHKANIETLFGLTSKAFEGVEKLVELNVQATKAALAETANHTQAVLGAKDAQELLALQAGLVQPLAEKTAA YSRHIYDIATAASAELSKTFEGQAADAQKKFVGIVDNAAKNAPAGSETAVAVMKSAVAAANNAFESVQKAVKQASDIAEA NFNTVAASAVNASKTVSKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic granule. Note=Associated with the surface of cytoplasmic polyhydroxyalkanoate granules [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018968 [H]
Pfam domain/function: PF09361 Phasin_2 [H]
EC number: NA
Molecular weight: Translated: 18585; Mature: 18585
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTAEQVLASHKANIETLFGLTSKAFEGVEKLVELNVQATKAALAETANHTQAVLGAKDA CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH QELLALQAGLVQPLAEKTAAYSRHIYDIATAASAELSKTFEGQAADAQKKFVGIVDNAAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC NAPAGSETAVAVMKSAVAAANNAFESVQKAVKQASDIAEANFNTVAASAVNASKTVSKKR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLTAEQVLASHKANIETLFGLTSKAFEGVEKLVELNVQATKAALAETANHTQAVLGAKDA CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH QELLALQAGLVQPLAEKTAAYSRHIYDIATAASAELSKTFEGQAADAQKKFVGIVDNAAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC NAPAGSETAVAVMKSAVAAANNAFESVQKAVKQASDIAEANFNTVAASAVNASKTVSKKR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA