The gene/protein map for NC_008600 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788862

Identifier: 91788862

GI number: 91788862

Start: 3163099

End: 3164034

Strand: Direct

Name: 91788862

Synonym: Bpro_3002

Alternate gene names: NA

Gene position: 3163099-3164034 (Clockwise)

Preceding gene: 91788853

Following gene: 91788863

Centisome position: 60.83

GC content: 60.79

Gene sequence:

>936_bases
ATGGCTTCACGCGTTCTATGGAAAGGTGCCATCAGCTTTGGGCTGGTCCACATCCCGGTGGCGCTGCATGCGGCCACGTC
TGACAGCGGTATCGATTTTGACTGGCTGGACAAACGCAGCATGGACCCGGTTGGCTACAAACGCATCAACAAAAAGACCG
GCAAGGAAATCAGCCGGGAAAACATCGTCAAGGGCATCAAATACCAGGATGACCAGTATGTGGTCCTGTCCGCAGAGGAA
ATTGCCGGGGCTTATCCCAGGACGACCCAGACGATCGAGATCGAAAATTTCGTTTCCAATACGGAAATTCCCTTCATCTA
CCTGGAGCGGCCCTACTACATCGCGCCCATCAACAAAGGGCAAAAAGTCTATGCCCTGCTGCGCGACACCTTGCTTGACA
CGCAGCGGGTCGGCATCGCGCGGGTGGTGATCCAGACCAAGCAACACCTGGCCGTGCTGGTGCCCTCCGGCCCTGGCCTC
ATCCTGAACCTGATGCGCTGGGGCGAAGAAATCCGCTCCTGGGAAGACCTGGACCTTCCACCCGAGGGCGCGAAGGCGGC
CGGGCTGTCGGCGCGCGAACTGTCCATGGCCAAACAGCTCGTCAATGACATGACGGAGACCTGGCATCCGGAAAAATTCA
AGGACTCGTTCAGGGACGAAATCATGGCGCTGGTCGAACGCAAGGCCAGGGAAGGCAAGATCGAAACCGTGGAACAGCCT
GAAGCGGCGGAGGATTCCGCCGCACGTTCGGGCGCCACCATCCTCGACCTCACCGAATTGCTCCAGCGCAGCCTGCGCAA
GGGCGGCGCGGCGGCCGCAGCAGATGACAAGGCGCCCGCCAAGTCCGACACCAGAGCCCGGACGGCCACCCGCACGACCC
CCCGCAAAAATACGGTAAAAGCCGCTTCGCGCACGCACGCCAAGCGGGCCGCCTGA

Upstream 100 bases:

>100_bases
CAACACCATCTGCGTCTGCGCGGTTTGCGGGAAAGCATTCACGGCACCGCCGCCGACAGGGGCGGCTGACGCAGTACGGT
ACGACCGGAAGGAGCTGGCA

Downstream 100 bases:

>100_bases
GGCTTGCCGCCAACACATCCGAACCATGGGTTCCGCGGATTTGCTGAAAACCTACCGCGCCAGGCGCGACTTCAAGCAGA
CGCCCGAGCCCGCCACGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MASRVLWKGAISFGLVHIPVALHAATSDSGIDFDWLDKRSMDPVGYKRINKKTGKEISRENIVKGIKYQDDQYVVLSAEE
IAGAYPRTTQTIEIENFVSNTEIPFIYLERPYYIAPINKGQKVYALLRDTLLDTQRVGIARVVIQTKQHLAVLVPSGPGL
ILNLMRWGEEIRSWEDLDLPPEGAKAAGLSARELSMAKQLVNDMTETWHPEKFKDSFRDEIMALVERKAREGKIETVEQP
EAAEDSAARSGATILDLTELLQRSLRKGGAAAAADDKAPAKSDTRARTATRTTPRKNTVKAASRTHAKRAA

Sequences:

>Translated_311_residues
MASRVLWKGAISFGLVHIPVALHAATSDSGIDFDWLDKRSMDPVGYKRINKKTGKEISRENIVKGIKYQDDQYVVLSAEE
IAGAYPRTTQTIEIENFVSNTEIPFIYLERPYYIAPINKGQKVYALLRDTLLDTQRVGIARVVIQTKQHLAVLVPSGPGL
ILNLMRWGEEIRSWEDLDLPPEGAKAAGLSARELSMAKQLVNDMTETWHPEKFKDSFRDEIMALVERKAREGKIETVEQP
EAAEDSAARSGATILDLTELLQRSLRKGGAAAAADDKAPAKSDTRARTATRTTPRKNTVKAASRTHAKRAA
>Mature_310_residues
ASRVLWKGAISFGLVHIPVALHAATSDSGIDFDWLDKRSMDPVGYKRINKKTGKEISRENIVKGIKYQDDQYVVLSAEEI
AGAYPRTTQTIEIENFVSNTEIPFIYLERPYYIAPINKGQKVYALLRDTLLDTQRVGIARVVIQTKQHLAVLVPSGPGLI
LNLMRWGEEIRSWEDLDLPPEGAKAAGLSARELSMAKQLVNDMTETWHPEKFKDSFRDEIMALVERKAREGKIETVEQPE
AAEDSAARSGATILDLTELLQRSLRKGGAAAAADDKAPAKSDTRARTATRTTPRKNTVKAASRTHAKRAA

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 34539; Mature: 34408

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRVLWKGAISFGLVHIPVALHAATSDSGIDFDWLDKRSMDPVGYKRINKKTGKEISRE
CCCCHHHHHHHHHHHEEECCEEEECCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHH
NIVKGIKYQDDQYVVLSAEEIAGAYPRTTQTIEIENFVSNTEIPFIYLERPYYIAPINKG
HHHHCCCCCCCCEEEEEHHHHCCCCCCCCEEEEHHHHHCCCCCCEEEEECCEEEEECCCC
QKVYALLRDTLLDTQRVGIARVVIQTKQHLAVLVPSGPGLILNLMRWGEEIRSWEDLDLP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCC
PEGAKAAGLSARELSMAKQLVNDMTETWHPEKFKDSFRDEIMALVERKAREGKIETVEQP
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EAAEDSAARSGATILDLTELLQRSLRKGGAAAAADDKAPAKSDTRARTATRTTPRKNTVK
CCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHH
AASRTHAKRAA
HHHHHHHHCCC
>Mature Secondary Structure 
ASRVLWKGAISFGLVHIPVALHAATSDSGIDFDWLDKRSMDPVGYKRINKKTGKEISRE
CCCHHHHHHHHHHHEEECCEEEECCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHH
NIVKGIKYQDDQYVVLSAEEIAGAYPRTTQTIEIENFVSNTEIPFIYLERPYYIAPINKG
HHHHCCCCCCCCEEEEEHHHHCCCCCCCCEEEEHHHHHCCCCCCEEEEECCEEEEECCCC
QKVYALLRDTLLDTQRVGIARVVIQTKQHLAVLVPSGPGLILNLMRWGEEIRSWEDLDLP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCC
PEGAKAAGLSARELSMAKQLVNDMTETWHPEKFKDSFRDEIMALVERKAREGKIETVEQP
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EAAEDSAARSGATILDLTELLQRSLRKGGAAAAADDKAPAKSDTRARTATRTTPRKNTVK
CCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHH
AASRTHAKRAA
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]