Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788844

Identifier: 91788844

GI number: 91788844

Start: 3139369

End: 3140556

Strand: Direct

Name: 91788844

Synonym: Bpro_2984

Alternate gene names: NA

Gene position: 3139369-3140556 (Clockwise)

Preceding gene: 91788843

Following gene: 91788845

Centisome position: 60.37

GC content: 62.79

Gene sequence:

>1188_bases
ATGACCTCACGCCGACTTGTTTTGACCCGCAGTGCTGCCGTTATCGGCGCCGCATCCACTGGCCTGCTGCTGCCCGAAAT
CGTGCGCGCACAGTCGGGCAAGGTGCGTGTGGGCTTCATGTTGCCCTACACCGGCACCTTTGCCCAACTCGGGGTGGCCA
TTGAAAACGGCTTTCGCCTGGCGATCAATGAGCAAGGCGGCAAGCTGGGCGGCCGCGAGATCGAATACTTCAAGGTCGAC
GATGAGTCCGAGCCGTCCAAAGGCATTGAAAACGCCAGCAAGCTGGTGCAACGCGACAAGGTCGATGTACTGGTCGGCAC
GGTGCACTCCGGTGTGCAGATGGGTATCCAGAAGGTCGCGCGCGACAGCGGCGTACTGAGCCTGATTCCCAACGCGGGCG
TGCATGCCGCCACCCGCAGCCTGTGCGCACCCAATGTGTTCCGTACCTCCTTCAGCAACTCGCAACCTACCCGCGCCCTG
GGTCAGGCCATGATCGCAAAAGGCCATAAAAAAGCCGTCTGGATCACCTGGAAATATGCAGCCGGCGACGAGGCCTTTGA
AGGCTTCAAGGAAAGCTACACAGCGGCCGGCGGCACCATTATCAAGGAACTGGGCCTGCCCTTCCCCAACGTTGAATTCC
AGGCGCTGCTGACCGAAATCGCCGCACTCAAGCCCGATGCCGTGGCCTGCTTCTTCGCCGGCGGCGGCGCCGCGAAGTTC
ATCCGCGACTACGCAGCGGCGGGCCTCAAAGGCAAGATCCCGCTCTACGGTTCCGGCTTCCTGACCGAAGGCGTGCTGGA
CGCGGCCGGCCCTGCGGCGGACGGCATCATCACCACCATGCACTACAGCGACTCGCTGGACACGCCGCGCAACAAGAAAT
TCCGCCTCGACTACGCCAAAGCCTTCAAGACGCAACCCGATGTGTACGCGGTGCAGGGCTATGACACCGGCCTGCTGCTG
ATCCAGGGCGCCAACGCCGTCAAGGGCGACCTGGCCAACAAGCCCGCGCTCTACAAGGCCATGGAAGGCGCCACCATCGA
CAGCCCGCGCGGCAAGTGGACCATGAGCAAGGCACACAACCCGGTGCAGGACATGTACCTGCGTGTGGTGGAAAACAAGG
AAAACAAGGTGCTCGGCGTTGCGGCCAAGGCACTGGCCGACTCCGGCGCCGGCTGCAAGATGGGCTAG

Upstream 100 bases:

>100_bases
ACAATTTAATCTTCAATCTCGGGTTTTACACTAGGGCTGCAGGCGCACCGCACCCTTAATATCCGTCTGGTACGTTTCCG
TCTCAACCAGGAGTTTTTCC

Downstream 100 bases:

>100_bases
GCATGGCCCCCACGGTCGCTCACTGCGTGTAGCTCCCGAGGCCTTGCAGGCCGCGGCTCGCGAGACGCTTCGCCTCTGTC
GCCTGTCCAAAGCTGCTCAA

Product: twin-arginine translocation pathway signal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MTSRRLVLTRSAAVIGAASTGLLLPEIVRAQSGKVRVGFMLPYTGTFAQLGVAIENGFRLAINEQGGKLGGREIEYFKVD
DESEPSKGIENASKLVQRDKVDVLVGTVHSGVQMGIQKVARDSGVLSLIPNAGVHAATRSLCAPNVFRTSFSNSQPTRAL
GQAMIAKGHKKAVWITWKYAAGDEAFEGFKESYTAAGGTIIKELGLPFPNVEFQALLTEIAALKPDAVACFFAGGGAAKF
IRDYAAAGLKGKIPLYGSGFLTEGVLDAAGPAADGIITTMHYSDSLDTPRNKKFRLDYAKAFKTQPDVYAVQGYDTGLLL
IQGANAVKGDLANKPALYKAMEGATIDSPRGKWTMSKAHNPVQDMYLRVVENKENKVLGVAAKALADSGAGCKMG

Sequences:

>Translated_395_residues
MTSRRLVLTRSAAVIGAASTGLLLPEIVRAQSGKVRVGFMLPYTGTFAQLGVAIENGFRLAINEQGGKLGGREIEYFKVD
DESEPSKGIENASKLVQRDKVDVLVGTVHSGVQMGIQKVARDSGVLSLIPNAGVHAATRSLCAPNVFRTSFSNSQPTRAL
GQAMIAKGHKKAVWITWKYAAGDEAFEGFKESYTAAGGTIIKELGLPFPNVEFQALLTEIAALKPDAVACFFAGGGAAKF
IRDYAAAGLKGKIPLYGSGFLTEGVLDAAGPAADGIITTMHYSDSLDTPRNKKFRLDYAKAFKTQPDVYAVQGYDTGLLL
IQGANAVKGDLANKPALYKAMEGATIDSPRGKWTMSKAHNPVQDMYLRVVENKENKVLGVAAKALADSGAGCKMG
>Mature_394_residues
TSRRLVLTRSAAVIGAASTGLLLPEIVRAQSGKVRVGFMLPYTGTFAQLGVAIENGFRLAINEQGGKLGGREIEYFKVDD
ESEPSKGIENASKLVQRDKVDVLVGTVHSGVQMGIQKVARDSGVLSLIPNAGVHAATRSLCAPNVFRTSFSNSQPTRALG
QAMIAKGHKKAVWITWKYAAGDEAFEGFKESYTAAGGTIIKELGLPFPNVEFQALLTEIAALKPDAVACFFAGGGAAKFI
RDYAAAGLKGKIPLYGSGFLTEGVLDAAGPAADGIITTMHYSDSLDTPRNKKFRLDYAKAFKTQPDVYAVQGYDTGLLLI
QGANAVKGDLANKPALYKAMEGATIDSPRGKWTMSKAHNPVQDMYLRVVENKENKVLGVAAKALADSGAGCKMG

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 41882; Mature: 41750

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRRLVLTRSAAVIGAASTGLLLPEIVRAQSGKVRVGFMLPYTGTFAQLGVAIENGFRL
CCCCEEEEEECCEEEECCCCCCHHHHHHHCCCCCEEEEEECCCCCCHHHHCEEEECCEEE
AINEQGGKLGGREIEYFKVDDESEPSKGIENASKLVQRDKVDVLVGTVHSGVQMGIQKVA
EEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHH
RDSGVLSLIPNAGVHAATRSLCAPNVFRTSFSNSQPTRALGQAMIAKGHKKAVWITWKYA
HCCCCEEECCCCCHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEC
AGDEAFEGFKESYTAAGGTIIKELGLPFPNVEFQALLTEIAALKPDAVACFFAGGGAAKF
CCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHH
IRDYAAAGLKGKIPLYGSGFLTEGVLDAAGPAADGIITTMHYSDSLDTPRNKKFRLDYAK
HHHHHHCCCCCCCCEEECCCHHHCCHHCCCCCCCCEEEEEEECCCCCCCCCCEEEEEHHH
AFKTQPDVYAVQGYDTGLLLIQGANAVKGDLANKPALYKAMEGATIDSPRGKWTMSKAHN
HHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEHHHCCC
PVQDMYLRVVENKENKVLGVAAKALADSGAGCKMG
CHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TSRRLVLTRSAAVIGAASTGLLLPEIVRAQSGKVRVGFMLPYTGTFAQLGVAIENGFRL
CCCEEEEEECCEEEECCCCCCHHHHHHHCCCCCEEEEEECCCCCCHHHHCEEEECCEEE
AINEQGGKLGGREIEYFKVDDESEPSKGIENASKLVQRDKVDVLVGTVHSGVQMGIQKVA
EEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHH
RDSGVLSLIPNAGVHAATRSLCAPNVFRTSFSNSQPTRALGQAMIAKGHKKAVWITWKYA
HCCCCEEECCCCCHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEC
AGDEAFEGFKESYTAAGGTIIKELGLPFPNVEFQALLTEIAALKPDAVACFFAGGGAAKF
CCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHH
IRDYAAAGLKGKIPLYGSGFLTEGVLDAAGPAADGIITTMHYSDSLDTPRNKKFRLDYAK
HHHHHHCCCCCCCCEEECCCHHHCCHHCCCCCCCCEEEEEEECCCCCCCCCCEEEEEHHH
AFKTQPDVYAVQGYDTGLLLIQGANAVKGDLANKPALYKAMEGATIDSPRGKWTMSKAHN
HHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEHHHCCC
PVQDMYLRVVENKENKVLGVAAKALADSGAGCKMG
CHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA