| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91788841
Identifier: 91788841
GI number: 91788841
Start: 3136511
End: 3136909
Strand: Direct
Name: 91788841
Synonym: Bpro_2981
Alternate gene names: NA
Gene position: 3136511-3136909 (Clockwise)
Preceding gene: 91788840
Following gene: 91788842
Centisome position: 60.31
GC content: 63.41
Gene sequence:
>399_bases ATGACTGTGAGGATCGTCAAATTGGGTACAGCCCGCGGCGCCGACGAAGGCCTGCGCATAGGCACGGTCCGCAGACCTCC CCGGGGCGTTCCCAAAAGCCAGTTCTCGTCACAGAATTGGTACGACGTCTGGTACCCCAACCTCGCGCCGAGTGTGGAAA CCATGAAACTGGGCCAGTCGGCCCAGGCTGGCCCCGATGGTGACCGGGACTGGGTCGCGTTCAGAAAGAAATACCGCGCC GAGATGGCCGAACCGGACGCCAACCGCAGCCTGGACCTGCTGGCCGCGCTGTCGCAGCGCAGCAATTTTTCCGTGGGCTG TTACTGCGACAACGAAGCGCGCTGCCACCGCTCGCTGCTGCGCGAACTGCTCCGCGAACGCGGCGCAAATATCGCTTAA
Upstream 100 bases:
>100_bases TTCAAATGGTGTTGTTTCAAAAGACAGCTATCAAAACAGCTATCAGCGGCGCCTGCCCCACCAAAAAAAAGGGGGCCGGC CGGCAAACGAGGAGACTGGC
Downstream 100 bases:
>100_bases CCTTGATGCTCGAGCCGACTGGCGCGAATGCCGCGGTGCGCTGTTTTTGACAACTTGCCACATACTTTTTCTGGAGATTA TTCGATGAAGCTCAAAATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MTVRIVKLGTARGADEGLRIGTVRRPPRGVPKSQFSSQNWYDVWYPNLAPSVETMKLGQSAQAGPDGDRDWVAFRKKYRA EMAEPDANRSLDLLAALSQRSNFSVGCYCDNEARCHRSLLRELLRERGANIA
Sequences:
>Translated_132_residues MTVRIVKLGTARGADEGLRIGTVRRPPRGVPKSQFSSQNWYDVWYPNLAPSVETMKLGQSAQAGPDGDRDWVAFRKKYRA EMAEPDANRSLDLLAALSQRSNFSVGCYCDNEARCHRSLLRELLRERGANIA >Mature_131_residues TVRIVKLGTARGADEGLRIGTVRRPPRGVPKSQFSSQNWYDVWYPNLAPSVETMKLGQSAQAGPDGDRDWVAFRKKYRAE MAEPDANRSLDLLAALSQRSNFSVGCYCDNEARCHRSLLRELLRERGANIA
Specific function: Unknown
COG id: COG3189
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14812; Mature: 14681
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRIVKLGTARGADEGLRIGTVRRPPRGVPKSQFSSQNWYDVWYPNLAPSVETMKLGQS CEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCC AQAGPDGDRDWVAFRKKYRAEMAEPDANRSLDLLAALSQRSNFSVGCYCDNEARCHRSLL CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHH RELLRERGANIA HHHHHHCCCCCC >Mature Secondary Structure TVRIVKLGTARGADEGLRIGTVRRPPRGVPKSQFSSQNWYDVWYPNLAPSVETMKLGQS EEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCC AQAGPDGDRDWVAFRKKYRAEMAEPDANRSLDLLAALSQRSNFSVGCYCDNEARCHRSLL CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHH RELLRERGANIA HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA