Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yqcA [H]

Identifier: 91788842

GI number: 91788842

Start: 3136994

End: 3137485

Strand: Direct

Name: yqcA [H]

Synonym: Bpro_2982

Alternate gene names: 91788842

Gene position: 3136994-3137485 (Clockwise)

Preceding gene: 91788841

Following gene: 91788843

Centisome position: 60.32

GC content: 62.4

Gene sequence:

>492_bases
ATGAAGCTCAAAATCCTGGTGGGCACCATGACCAGCACCGCCGACCATGTGGCACAGGCAATTCAGATGGATTGCGCAGA
CCTGGTGAGCGGCATCGACATCCAGTTGATGGACGCACTGGATATCACGATCTTTGATGCCGCCCAGGCGGAAGATGCGC
TCTATCTCATCTGCACCTCCACGTATGGTGCGGGCGATGTCCCGGACAATGCCCGCACCCTGTATGAATCACTGGGCTCC
CAGCCGCAGTTCCTGGGCCACGTGCGCTACGGCGTGATCGCGCTGGGTGACAGCGCCCACGCCCAGACATTCTGCTTTGG
CGGCAAGCAATTTGACGAGCGCCTGCAGGATCTTGGCGCGCAGCGCATCGGCGAGGTCTGGTGTCACGACGCCAGCAGTG
GCACCATACCCGAAACAGAGGGTACCGAATGGTGCCGCCAGTGGCTCGCCGAAGCGTTGCAAGCCGTGGGGGCCAGCCCG
GCCACCGCCTGA

Upstream 100 bases:

>100_bases
CGCAAATATCGCTTAACCTTGATGCTCGAGCCGACTGGCGCGAATGCCGCGGTGCGCTGTTTTTGACAACTTGCCACATA
CTTTTTCTGGAGATTATTCG

Downstream 100 bases:

>100_bases
GGGCAGGAAAACCGTGGCTCGCCTCGTTGTTGCCTCCCGCTCTTTGTTGTTCTCTCGTTCTTGTTGCCTCTCGCTCTTGA
TTAGCAGGTGAAATAAGCGA

Product: flavodoxin/nitric oxide synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MKLKILVGTMTSTADHVAQAIQMDCADLVSGIDIQLMDALDITIFDAAQAEDALYLICTSTYGAGDVPDNARTLYESLGS
QPQFLGHVRYGVIALGDSAHAQTFCFGGKQFDERLQDLGAQRIGEVWCHDASSGTIPETEGTEWCRQWLAEALQAVGASP
ATA

Sequences:

>Translated_163_residues
MKLKILVGTMTSTADHVAQAIQMDCADLVSGIDIQLMDALDITIFDAAQAEDALYLICTSTYGAGDVPDNARTLYESLGS
QPQFLGHVRYGVIALGDSAHAQTFCFGGKQFDERLQDLGAQRIGEVWCHDASSGTIPETEGTEWCRQWLAEALQAVGASP
ATA
>Mature_163_residues
MKLKILVGTMTSTADHVAQAIQMDCADLVSGIDIQLMDALDITIFDAAQAEDALYLICTSTYGAGDVPDNARTLYESLGS
QPQFLGHVRYGVIALGDSAHAQTFCFGGKQFDERLQDLGAQRIGEVWCHDASSGTIPETEGTEWCRQWLAEALQAVGASP
ATA

Specific function: Probable electron transporter [H]

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1789154, Length=151, Percent_Identity=40.3973509933775, Blast_Score=97, Evalue=6e-22,
Organism=Escherichia coli, GI1790181, Length=96, Percent_Identity=36.4583333333333, Blast_Score=69, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17554134, Length=122, Percent_Identity=35.2459016393443, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001094
- InterPro:   IPR008254 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: NA

Molecular weight: Translated: 17443; Mature: 17443

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKILVGTMTSTADHVAQAIQMDCADLVSGIDIQLMDALDITIFDAAQAEDALYLICTS
CEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHCEEEECCCCCCCEEEEEEEC
TYGAGDVPDNARTLYESLGSQPQFLGHVRYGVIALGDSAHAQTFCFGGKQFDERLQDLGA
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHEEEEEECCCCCCCEEECCCHHHHHHHHHHHH
QRIGEVWCHDASSGTIPETEGTEWCRQWLAEALQAVGASPATA
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKLKILVGTMTSTADHVAQAIQMDCADLVSGIDIQLMDALDITIFDAAQAEDALYLICTS
CEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHCEEEECCCCCCCEEEEEEEC
TYGAGDVPDNARTLYESLGSQPQFLGHVRYGVIALGDSAHAQTFCFGGKQFDERLQDLGA
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHEEEEEECCCCCCCEEECCCHHHHHHHHHHHH
QRIGEVWCHDASSGTIPETEGTEWCRQWLAEALQAVGASPATA
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]