| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yqcA [H]
Identifier: 91788842
GI number: 91788842
Start: 3136994
End: 3137485
Strand: Direct
Name: yqcA [H]
Synonym: Bpro_2982
Alternate gene names: 91788842
Gene position: 3136994-3137485 (Clockwise)
Preceding gene: 91788841
Following gene: 91788843
Centisome position: 60.32
GC content: 62.4
Gene sequence:
>492_bases ATGAAGCTCAAAATCCTGGTGGGCACCATGACCAGCACCGCCGACCATGTGGCACAGGCAATTCAGATGGATTGCGCAGA CCTGGTGAGCGGCATCGACATCCAGTTGATGGACGCACTGGATATCACGATCTTTGATGCCGCCCAGGCGGAAGATGCGC TCTATCTCATCTGCACCTCCACGTATGGTGCGGGCGATGTCCCGGACAATGCCCGCACCCTGTATGAATCACTGGGCTCC CAGCCGCAGTTCCTGGGCCACGTGCGCTACGGCGTGATCGCGCTGGGTGACAGCGCCCACGCCCAGACATTCTGCTTTGG CGGCAAGCAATTTGACGAGCGCCTGCAGGATCTTGGCGCGCAGCGCATCGGCGAGGTCTGGTGTCACGACGCCAGCAGTG GCACCATACCCGAAACAGAGGGTACCGAATGGTGCCGCCAGTGGCTCGCCGAAGCGTTGCAAGCCGTGGGGGCCAGCCCG GCCACCGCCTGA
Upstream 100 bases:
>100_bases CGCAAATATCGCTTAACCTTGATGCTCGAGCCGACTGGCGCGAATGCCGCGGTGCGCTGTTTTTGACAACTTGCCACATA CTTTTTCTGGAGATTATTCG
Downstream 100 bases:
>100_bases GGGCAGGAAAACCGTGGCTCGCCTCGTTGTTGCCTCCCGCTCTTTGTTGTTCTCTCGTTCTTGTTGCCTCTCGCTCTTGA TTAGCAGGTGAAATAAGCGA
Product: flavodoxin/nitric oxide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MKLKILVGTMTSTADHVAQAIQMDCADLVSGIDIQLMDALDITIFDAAQAEDALYLICTSTYGAGDVPDNARTLYESLGS QPQFLGHVRYGVIALGDSAHAQTFCFGGKQFDERLQDLGAQRIGEVWCHDASSGTIPETEGTEWCRQWLAEALQAVGASP ATA
Sequences:
>Translated_163_residues MKLKILVGTMTSTADHVAQAIQMDCADLVSGIDIQLMDALDITIFDAAQAEDALYLICTSTYGAGDVPDNARTLYESLGS QPQFLGHVRYGVIALGDSAHAQTFCFGGKQFDERLQDLGAQRIGEVWCHDASSGTIPETEGTEWCRQWLAEALQAVGASP ATA >Mature_163_residues MKLKILVGTMTSTADHVAQAIQMDCADLVSGIDIQLMDALDITIFDAAQAEDALYLICTSTYGAGDVPDNARTLYESLGS QPQFLGHVRYGVIALGDSAHAQTFCFGGKQFDERLQDLGAQRIGEVWCHDASSGTIPETEGTEWCRQWLAEALQAVGASP ATA
Specific function: Probable electron transporter [H]
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1789154, Length=151, Percent_Identity=40.3973509933775, Blast_Score=97, Evalue=6e-22, Organism=Escherichia coli, GI1790181, Length=96, Percent_Identity=36.4583333333333, Blast_Score=69, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17554134, Length=122, Percent_Identity=35.2459016393443, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001094 - InterPro: IPR008254 [H]
Pfam domain/function: PF00258 Flavodoxin_1 [H]
EC number: NA
Molecular weight: Translated: 17443; Mature: 17443
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKILVGTMTSTADHVAQAIQMDCADLVSGIDIQLMDALDITIFDAAQAEDALYLICTS CEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHCEEEECCCCCCCEEEEEEEC TYGAGDVPDNARTLYESLGSQPQFLGHVRYGVIALGDSAHAQTFCFGGKQFDERLQDLGA CCCCCCCCCHHHHHHHHHCCCCHHHHHHHEEEEEECCCCCCCEEECCCHHHHHHHHHHHH QRIGEVWCHDASSGTIPETEGTEWCRQWLAEALQAVGASPATA HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKLKILVGTMTSTADHVAQAIQMDCADLVSGIDIQLMDALDITIFDAAQAEDALYLICTS CEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHCEEEECCCCCCCEEEEEEEC TYGAGDVPDNARTLYESLGSQPQFLGHVRYGVIALGDSAHAQTFCFGGKQFDERLQDLGA CCCCCCCCCHHHHHHHHHCCCCHHHHHHHEEEEEECCCCCCCEEECCCHHHHHHHHHHHH QRIGEVWCHDASSGTIPETEGTEWCRQWLAEALQAVGASPATA HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]