| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788820
Identifier: 91788820
GI number: 91788820
Start: 3121258
End: 3122349
Strand: Direct
Name: 91788820
Synonym: Bpro_2960
Alternate gene names: NA
Gene position: 3121258-3122349 (Clockwise)
Preceding gene: 91788819
Following gene: 91788821
Centisome position: 60.02
GC content: 63.28
Gene sequence:
>1092_bases ATGAGCAATTTCGACCATTTTGTAGGCACCCGGGCCGTTTCCGGGCAGCAGGCTTTTGACATCGACGTCCTCAGCACCTA TCTGAAACAGCACCTCGAGGGTTTCGAAGGACCGTTGACCGTCGAGATATTCAAGGGTGGCCAGTCCAACCCGACCTACA AGCTGATCACACCGGGGCGGTCTTACGTCATGCGGGCCAAACCGGGCCCTGTGGCCAGGCTGCTGCCGTCGGCCCACGCG GTGGAGCGCGAATTCAAGGTCATGCAGGGCCTGCAGGGCACCGACGTGCCCGTCGCCAGGATGCACTGCCTGTGCGAAGA CGAGTCCGTGATCGGGCGGGCTTTTTATGTGATGGAGTTCGTCGAGGGCCGGGTCCTCTGGGACCAGTCCCTGCCCGGCA TGACCAACACCCGGCGCGGCGAGATCTATGACGAGATGAACCGCGTGATCGCCGCCCTGCACACCGTGAGGTTTGCGGAA CGGGGCCTGGCCGATTACGGCAAGCCCGGCAACTACTTTGAGCGCCAGATTGGCCGCTGGAGCAAGCAGTACGCGGCATC CATTACCCAACCGATTCCCGAGATGGATTCGCTGATCCAGTGGCTGCCAGCCAATATCCCTGCCGGCGCGCGCGATGACA GCATGGTCTCCATCGTGCACGGCGACTTCCGGCTCGACAACCTGATGTTTCATCCCACCGAGCCGCGCGTACTGGCGGTG CTCGACTGGGAGCTGTCCACCCTGGGCCATCCGCTGGCAGACTTCAGCTACCACTGCATGGCCTGGCACATACCACCGGG CGCGTTTCGCGGCATTGGCGGCCTGGACATCGCCAGCCTGGGCATTCCTTCGGAAGCCGAATACATCCGCCGTTATTGCG AGCGCACCGGCCTGGCCACACCCGAAGCCCTCAAGGCCGACTGGAATTTCTACCTTGCCTACAACCTGTTTCGCCTCGCA GCGATTTTGCAGGGCATTGCCAAACGGGTGGAAGCCGGTACCGCCTCCAGCGCGCAGGCGGTCAGCTCGGCAGCGGGTGC ACCGCTGCTGGCCGGGATGGCCTGGCGCTTTGCGCTTGAAAGCCAGCGCTGA
Upstream 100 bases:
>100_bases GAGCGCGAGGAGGCGATCCGCATCGAGCCAGGGGGCCTGGTGGTGCGAAACCGCGAAGCCCTGATGCGCATCTCCGAAGC CGATATGGACAAATAAGCAC
Downstream 100 bases:
>100_bases CGCTGGCAACTTTTTACCCCATCACCAACACCCCTGCAGGAGACCTCATGGATTTCAGCTACACCCCCAAAGTCAAGGAA CTGCAGGCGCGCCTGTTGAC
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Acyl-CoA Dehydrogenase; Phosphotransferase Family; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-Coa Dehydrogenase Fade; Acyl-CoA Dehydrogenase Family Member
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MSNFDHFVGTRAVSGQQAFDIDVLSTYLKQHLEGFEGPLTVEIFKGGQSNPTYKLITPGRSYVMRAKPGPVARLLPSAHA VEREFKVMQGLQGTDVPVARMHCLCEDESVIGRAFYVMEFVEGRVLWDQSLPGMTNTRRGEIYDEMNRVIAALHTVRFAE RGLADYGKPGNYFERQIGRWSKQYAASITQPIPEMDSLIQWLPANIPAGARDDSMVSIVHGDFRLDNLMFHPTEPRVLAV LDWELSTLGHPLADFSYHCMAWHIPPGAFRGIGGLDIASLGIPSEAEYIRRYCERTGLATPEALKADWNFYLAYNLFRLA AILQGIAKRVEAGTASSAQAVSSAAGAPLLAGMAWRFALESQR
Sequences:
>Translated_363_residues MSNFDHFVGTRAVSGQQAFDIDVLSTYLKQHLEGFEGPLTVEIFKGGQSNPTYKLITPGRSYVMRAKPGPVARLLPSAHA VEREFKVMQGLQGTDVPVARMHCLCEDESVIGRAFYVMEFVEGRVLWDQSLPGMTNTRRGEIYDEMNRVIAALHTVRFAE RGLADYGKPGNYFERQIGRWSKQYAASITQPIPEMDSLIQWLPANIPAGARDDSMVSIVHGDFRLDNLMFHPTEPRVLAV LDWELSTLGHPLADFSYHCMAWHIPPGAFRGIGGLDIASLGIPSEAEYIRRYCERTGLATPEALKADWNFYLAYNLFRLA AILQGIAKRVEAGTASSAQAVSSAAGAPLLAGMAWRFALESQR >Mature_362_residues SNFDHFVGTRAVSGQQAFDIDVLSTYLKQHLEGFEGPLTVEIFKGGQSNPTYKLITPGRSYVMRAKPGPVARLLPSAHAV EREFKVMQGLQGTDVPVARMHCLCEDESVIGRAFYVMEFVEGRVLWDQSLPGMTNTRRGEIYDEMNRVIAALHTVRFAER GLADYGKPGNYFERQIGRWSKQYAASITQPIPEMDSLIQWLPANIPAGARDDSMVSIVHGDFRLDNLMFHPTEPRVLAVL DWELSTLGHPLADFSYHCMAWHIPPGAFRGIGGLDIASLGIPSEAEYIRRYCERTGLATPEALKADWNFYLAYNLFRLAA ILQGIAKRVEAGTASSAQAVSSAAGAPLLAGMAWRFALESQR
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI211971008, Length=356, Percent_Identity=48.314606741573, Blast_Score=323, Evalue=2e-88, Organism=Homo sapiens, GI48976061, Length=356, Percent_Identity=48.314606741573, Blast_Score=323, Evalue=2e-88, Organism=Homo sapiens, GI38505218, Length=326, Percent_Identity=41.4110429447853, Blast_Score=254, Evalue=1e-67, Organism=Caenorhabditis elegans, GI17562446, Length=346, Percent_Identity=36.4161849710983, Blast_Score=222, Evalue=2e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40284; Mature: 40153
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00109 PROTEIN_KINASE_TYR ; PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFDHFVGTRAVSGQQAFDIDVLSTYLKQHLEGFEGPLTVEIFKGGQSNPTYKLITPGR CCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEECCCC SYVMRAKPGPVARLLPSAHAVEREFKVMQGLQGTDVPVARMHCLCEDESVIGRAFYVMEF CEEEECCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH VEGRVLWDQSLPGMTNTRRGEIYDEMNRVIAALHTVRFAERGLADYGKPGNYFERQIGRW HCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH SKQYAASITQPIPEMDSLIQWLPANIPAGARDDSMVSIVHGDFRLDNLMFHPTEPRVLAV HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCEEECCEEECCCCCCEEEE LDWELSTLGHPLADFSYHCMAWHIPPGAFRGIGGLDIASLGIPSEAEYIRRYCERTGLAT EECCHHHCCCCHHCCCEEEEEEECCCHHHCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCC PEALKADWNFYLAYNLFRLAAILQGIAKRVEAGTASSAQAVSSAAGAPLLAGMAWRFALE CHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHC SQR CCC >Mature Secondary Structure SNFDHFVGTRAVSGQQAFDIDVLSTYLKQHLEGFEGPLTVEIFKGGQSNPTYKLITPGR CCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEECCCC SYVMRAKPGPVARLLPSAHAVEREFKVMQGLQGTDVPVARMHCLCEDESVIGRAFYVMEF CEEEECCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH VEGRVLWDQSLPGMTNTRRGEIYDEMNRVIAALHTVRFAERGLADYGKPGNYFERQIGRW HCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH SKQYAASITQPIPEMDSLIQWLPANIPAGARDDSMVSIVHGDFRLDNLMFHPTEPRVLAV HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCEEECCEEECCCCCCEEEE LDWELSTLGHPLADFSYHCMAWHIPPGAFRGIGGLDIASLGIPSEAEYIRRYCERTGLAT EECCHHHCCCCHHCCCEEEEEEECCCHHHCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCC PEALKADWNFYLAYNLFRLAAILQGIAKRVEAGTASSAQAVSSAAGAPLLAGMAWRFALE CHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHC SQR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA