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The map label for this gene is yeeY [H]

Identifier: 91788762

GI number: 91788762

Start: 3062000

End: 3062959

Strand: Direct

Name: yeeY [H]

Synonym: Bpro_2902

Alternate gene names: 91788762

Gene position: 3062000-3062959 (Clockwise)

Preceding gene: 91788755

Following gene: 91788763

Centisome position: 58.88

GC content: 66.35

Gene sequence:

>960_bases
ATGATTAACAATGCAGTCCGTGACGCCCTCACCCCCGAAGCCATTGGACTGATCGGTGCCGTGCACCGCACTGGAAGCAT
GGCTGCGGCCGCCCGCGAACTGGGCGTCGTGCCCAGCGCCCTGACCTACCGGATTCGACAGGTGGAAGATGCGCTCGATG
TCCTGCTGTTTGACCGCTCCTCGCGCCAGGCCAGACTGACCGAAGCCGGCAAGGAGCTGCTTCGCGAAGGCAACCGGCTG
CTGGCTGAGCTCGATGCGGTGGCCAATCGCGTCAAGCGGGTGGCCACCGGCTGGGAACCGGAACTCACCCTGGCCGTCGA
CAGCGTCATTTCGCGCACCACCGTTATGGAGCTGTGCGAGGCATTTTTTGCGCTGGATCCACCCACCCGCCTGCGGATTC
GCGAAGAGGCGCTCTCCGGCACGCTGGAGGCATTGACCTCCGGCCAGGCCGACCTGGCGATCGGCGTCGCGATTGACGTG
GAAACCAAGTCGATGCCCAACAAGTCGCTGCAAAGCAGGCCGCTGGGCACCATCCATTTCGTCTACGCCGTGGCACCGCA
TCACCCGCTGGCCCTGGCCACTGAACCCGTCACGGACGCAATGCTGATGCCGCACCGTGCGGTGGCTGTCGCCGACTCGG
TGCAGCGGGGCAGCGGTGTGACGATGGGCCTGCTGGGCGGGCAGGACATATTTACCGTGCCAGGCATGCAGGAAAAGCTC
GATGCGCAGCTGCGCGGCCTGGGTGGAGGCTTCCTGCCGGAATACCTGGCCAGGCCCCACATCGCGACTGGCCGGTTGGT
GGAAAAGAAGATGCAGCGGGCCGCACGCCTGGTACCCGTGAGTTACGCCTGGCGCCCCTCGACCGACGGCAGCGGAGGGC
GCGCCCTGCAGTGGTGGCTGGGGCAACTGGAGCGCCCCGCCACCCGCAAAGCGCTGCTGGAGCGCGAGCAATCGCTGTAA

Upstream 100 bases:

>100_bases
AAGGTGCGTTGCAATGACTCCACTGTAAGTTCCGGCACCCTTGTGGCCGTTGCCTTCATTTGATGGCATCATTCAAATTA
TTTGAATCATCAGACCCTAA

Downstream 100 bases:

>100_bases
AACCCGCCGGCAGACCGGCTTGCGGCCTCCTGCGTGTAGAGTGCGCTTATGGTTTTCGTTTATGGTTGCGCTGTAACTGT
TTTTTTAAACGATGGATAGC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MINNAVRDALTPEAIGLIGAVHRTGSMAAAARELGVVPSALTYRIRQVEDALDVLLFDRSSRQARLTEAGKELLREGNRL
LAELDAVANRVKRVATGWEPELTLAVDSVISRTTVMELCEAFFALDPPTRLRIREEALSGTLEALTSGQADLAIGVAIDV
ETKSMPNKSLQSRPLGTIHFVYAVAPHHPLALATEPVTDAMLMPHRAVAVADSVQRGSGVTMGLLGGQDIFTVPGMQEKL
DAQLRGLGGGFLPEYLARPHIATGRLVEKKMQRAARLVPVSYAWRPSTDGSGGRALQWWLGQLERPATRKALLEREQSL

Sequences:

>Translated_319_residues
MINNAVRDALTPEAIGLIGAVHRTGSMAAAARELGVVPSALTYRIRQVEDALDVLLFDRSSRQARLTEAGKELLREGNRL
LAELDAVANRVKRVATGWEPELTLAVDSVISRTTVMELCEAFFALDPPTRLRIREEALSGTLEALTSGQADLAIGVAIDV
ETKSMPNKSLQSRPLGTIHFVYAVAPHHPLALATEPVTDAMLMPHRAVAVADSVQRGSGVTMGLLGGQDIFTVPGMQEKL
DAQLRGLGGGFLPEYLARPHIATGRLVEKKMQRAARLVPVSYAWRPSTDGSGGRALQWWLGQLERPATRKALLEREQSL
>Mature_319_residues
MINNAVRDALTPEAIGLIGAVHRTGSMAAAARELGVVPSALTYRIRQVEDALDVLLFDRSSRQARLTEAGKELLREGNRL
LAELDAVANRVKRVATGWEPELTLAVDSVISRTTVMELCEAFFALDPPTRLRIREEALSGTLEALTSGQADLAIGVAIDV
ETKSMPNKSLQSRPLGTIHFVYAVAPHHPLALATEPVTDAMLMPHRAVAVADSVQRGSGVTMGLLGGQDIFTVPGMQEKL
DAQLRGLGGGFLPEYLARPHIATGRLVEKKMQRAARLVPVSYAWRPSTDGSGGRALQWWLGQLERPATRKALLEREQSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=283, Percent_Identity=36.0424028268551, Blast_Score=178, Evalue=4e-46,
Organism=Escherichia coli, GI1789492, Length=297, Percent_Identity=35.3535353535354, Blast_Score=154, Evalue=6e-39,
Organism=Escherichia coli, GI1786508, Length=265, Percent_Identity=28.6792452830189, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1787949, Length=260, Percent_Identity=30, Blast_Score=131, Evalue=5e-32,
Organism=Escherichia coli, GI1786713, Length=282, Percent_Identity=30.4964539007092, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI145693105, Length=168, Percent_Identity=29.1666666666667, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI157672245, Length=178, Percent_Identity=33.1460674157303, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1789506, Length=161, Percent_Identity=28.5714285714286, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34547; Mature: 34547

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINNAVRDALTPEAIGLIGAVHRTGSMAAAARELGVVPSALTYRIRQVEDALDVLLFDRS
CCCHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
SRQARLTEAGKELLREGNRLLAELDAVANRVKRVATGWEPELTLAVDSVISRTTVMELCE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
AFFALDPPTRLRIREEALSGTLEALTSGQADLAIGVAIDVETKSMPNKSLQSRPLGTIHF
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHCCCCEEEE
VYAVAPHHPLALATEPVTDAMLMPHRAVAVADSVQRGSGVTMGLLGGQDIFTVPGMQEKL
EEEECCCCCCEEECCCCHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCCEEECCCHHHHH
DAQLRGLGGGFLPEYLARPHIATGRLVEKKMQRAARLVPVSYAWRPSTDGSGGRALQWWL
HHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHH
GQLERPATRKALLEREQSL
HHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MINNAVRDALTPEAIGLIGAVHRTGSMAAAARELGVVPSALTYRIRQVEDALDVLLFDRS
CCCHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
SRQARLTEAGKELLREGNRLLAELDAVANRVKRVATGWEPELTLAVDSVISRTTVMELCE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
AFFALDPPTRLRIREEALSGTLEALTSGQADLAIGVAIDVETKSMPNKSLQSRPLGTIHF
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHCCCCEEEE
VYAVAPHHPLALATEPVTDAMLMPHRAVAVADSVQRGSGVTMGLLGGQDIFTVPGMQEKL
EEEECCCCCCEEECCCCHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCCEEECCCHHHHH
DAQLRGLGGGFLPEYLARPHIATGRLVEKKMQRAARLVPVSYAWRPSTDGSGGRALQWWL
HHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHH
GQLERPATRKALLEREQSL
HHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]