The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yceA [C]

Identifier: 91788755

GI number: 91788755

Start: 3055640

End: 3056425

Strand: Direct

Name: yceA [C]

Synonym: Bpro_2894

Alternate gene names: 91788755

Gene position: 3055640-3056425 (Clockwise)

Preceding gene: 91788753

Following gene: 91788762

Centisome position: 58.76

GC content: 59.8

Gene sequence:

>786_bases
ATGGACACCTTGCCTACAATGAGCGGCAACATGCAAATTCTGAATATTGCAGCCTATAAATTTGTCGCACTGGACCGCCT
GCCCGAGCTGCAGGCGGCCGTGCTGACGGCCGCGCAATCGCGCGGCATCAAGGGTACCGTGCTGCTCGCGGAAGAAGGCA
TCAACCTCTTTCTGGCCGCCGGCCGCGCCGACATTCATGATTTTTTGGCATGGCTGCGAACCGACGCCCGTTTTCATGAC
CTGGAAACCAAGGAAAGCTGGTCAACGGCACAGCCCTTTCGCAAGTTGCTGGTCAAGGTCAAGCCTGAGATTATCCGCAT
GAACCACCCGGCTATCCGGCCCTCTGCCGGTCGGGCACCAGCGGTTAACGCCACCACGCTCAAGCGTTGGCTGGACTGCG
GGCACGACGACGAGGGGCGCCCCGTGGTGACTTTGGACACACGCAACGCCTTTGAGGTCGATGTGGGCACCTTCAGGAAT
GCCATCGACTGGCGCATCGACAAGTTCACCGAGTTTCCGCAGGCCTTGCTGGATCACCGTGATGAGCTGCAGGGCAAGAC
GGTGGTGAGTTTTTGCACGGGCGGGATCCGCTGTGAAAAAGCCGCGATTCTCATGCAGGAGGCCGGCGTCAACCATGTTT
ACCAGCTCGACGGTGGCATCCTGAAATATTTTGAAGAGAGCGGTCACGCCCATTTCGAGGGCGAGTGTTTTGTGTTCGAC
GAACGCCGGGCGCTGGATCCGGCGCTCACCCCCCGGGTGCATGTCGGCGCCTTGTCTGACACCTGA

Upstream 100 bases:

>100_bases
TCGACGACTGAAAACTCGGTATGGATACGTAAATGGACAAACATGCGCTTCATTTTAGGGCTGGGGCCCACGCGCATTTT
GCTGATTACCCGCATTGCCC

Downstream 100 bases:

>100_bases
CACCGGCAAGGCATGGAAAGCTGTGGAGCTCACTCCCCCAAGGCGATAACCCATGGCTCCCTCACAACCCGCTCTTCGCA
CCGTCACCCCGGGTTCTGAC

Product: rhodanese superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MDTLPTMSGNMQILNIAAYKFVALDRLPELQAAVLTAAQSRGIKGTVLLAEEGINLFLAAGRADIHDFLAWLRTDARFHD
LETKESWSTAQPFRKLLVKVKPEIIRMNHPAIRPSAGRAPAVNATTLKRWLDCGHDDEGRPVVTLDTRNAFEVDVGTFRN
AIDWRIDKFTEFPQALLDHRDELQGKTVVSFCTGGIRCEKAAILMQEAGVNHVYQLDGGILKYFEESGHAHFEGECFVFD
ERRALDPALTPRVHVGALSDT

Sequences:

>Translated_261_residues
MDTLPTMSGNMQILNIAAYKFVALDRLPELQAAVLTAAQSRGIKGTVLLAEEGINLFLAAGRADIHDFLAWLRTDARFHD
LETKESWSTAQPFRKLLVKVKPEIIRMNHPAIRPSAGRAPAVNATTLKRWLDCGHDDEGRPVVTLDTRNAFEVDVGTFRN
AIDWRIDKFTEFPQALLDHRDELQGKTVVSFCTGGIRCEKAAILMQEAGVNHVYQLDGGILKYFEESGHAHFEGECFVFD
ERRALDPALTPRVHVGALSDT
>Mature_261_residues
MDTLPTMSGNMQILNIAAYKFVALDRLPELQAAVLTAAQSRGIKGTVLLAEEGINLFLAAGRADIHDFLAWLRTDARFHD
LETKESWSTAQPFRKLLVKVKPEIIRMNHPAIRPSAGRAPAVNATTLKRWLDCGHDDEGRPVVTLDTRNAFEVDVGTFRN
AIDWRIDKFTEFPQALLDHRDELQGKTVVSFCTGGIRCEKAAILMQEAGVNHVYQLDGGILKYFEESGHAHFEGECFVFD
ERRALDPALTPRVHVGALSDT

Specific function: Unknown. [C]

COG id: COG1054

COG function: function code R; Predicted sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Homo sapiens, GI111038120, Length=229, Percent_Identity=31.0043668122271, Blast_Score=96, Evalue=3e-20,
Organism=Escherichia coli, GI1787294, Length=264, Percent_Identity=29.1666666666667, Blast_Score=85, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR020936 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 29097; Mature: 29097

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLPTMSGNMQILNIAAYKFVALDRLPELQAAVLTAAQSRGIKGTVLLAEEGINLFLAA
CCCCCCCCCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEC
GRADIHDFLAWLRTDARFHDLETKESWSTAQPFRKLLVKVKPEIIRMNHPAIRPSAGRAP
CCCHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCC
AVNATTLKRWLDCGHDDEGRPVVTLDTRNAFEVDVGTFRNAIDWRIDKFTEFPQALLDHR
CCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCH
DELQGKTVVSFCTGGIRCEKAAILMQEAGVNHVYQLDGGILKYFEESGHAHFEGECFVFD
HHHCCCEEEEECCCCCEEHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCEECCEEEEEE
ERRALDPALTPRVHVGALSDT
CCCCCCCCCCCCEEEEECCCC
>Mature Secondary Structure
MDTLPTMSGNMQILNIAAYKFVALDRLPELQAAVLTAAQSRGIKGTVLLAEEGINLFLAA
CCCCCCCCCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEC
GRADIHDFLAWLRTDARFHDLETKESWSTAQPFRKLLVKVKPEIIRMNHPAIRPSAGRAP
CCCHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCC
AVNATTLKRWLDCGHDDEGRPVVTLDTRNAFEVDVGTFRNAIDWRIDKFTEFPQALLDHR
CCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCH
DELQGKTVVSFCTGGIRCEKAAILMQEAGVNHVYQLDGGILKYFEESGHAHFEGECFVFD
HHHCCCEEEEECCCCCEEHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCEECCEEEEEE
ERRALDPALTPRVHVGALSDT
CCCCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA