| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788753
Identifier: 91788753
GI number: 91788753
Start: 3051058
End: 3051948
Strand: Direct
Name: 91788753
Synonym: Bpro_2892
Alternate gene names: NA
Gene position: 3051058-3051948 (Clockwise)
Preceding gene: 91788752
Following gene: 91788755
Centisome position: 58.67
GC content: 60.27
Gene sequence:
>891_bases ATGCCCAGCGCAGCAGACCGCCTTGAATTTGGCCCACCTCGCGATACGGGCTACTTGCGCGCTTTCGCCCTGGCGCTGCT TGCCCACATTCTGTTGATGGCCGCGCTGACCTGGGGCGTCCACTGGAAACGCAGTGACCGGGCCGCCTCGTTTGAAGCCG AGTTGTGGTCCAGCGTGCCGCAGGAGGCGGCGCCCAAGCTGGTCGAAACGCCTCCACCCCCTCCACCACCACCGGAGCCC AAAGCGCCGGAAGTCAGGGTGACTCCACCCACGCCGAATGTGGACATTGCCCTGGAGCAGGAGAAAAAACGCAAGTTGCT GCAGCAGCAAAAGGAAGCCGAGACGCTGAAGGCGCAGAAGCTGCAGGAAAAACTGAAAGCCGAGCTGCAGGCCAAAAAGG AAAAAGAGCAAAAGGCCAAGGAGGAACTGGCCAAACGCAAGGCCGCTGAAGAAGCCCAGAAGACTGAAGCCAAAAAGCAG GACGCCAAAGACCTGGAGAAGAAAAAGCAGGCTGAAGCCCTGGCACAAAAGCAGCGGCAGGATGCACTGAACCGCATGAT GGGACTGGCGGGCGCCACGGGTGACGCCAATGCGAAAGGTTCAGGCCAAAAATCCAGCGGACCGTCTGCCGGCTATGCCG GAAAAGTCAGGGCCAGGGTCTTGCCCAATGTGGTGTTCACCGAAGATATTGCCGGCAACCCCACGGCCGAAGTTGAAGTG CGCAGCACACCCGACGGCGTCATCCTCGGCCAGCGGCTGGTCAAGTCAAGCGGCAACAAGGCTTGGGATGAGGCGGTGAT CAAAGCCATCATTCGTACCGGCACCCTGCCGCGAGACGATGATGGGCGGGTTCCCACTCCGATGATTCTGGAATTCAAAC CCAAAGGCTAG
Upstream 100 bases:
>100_bases CCGTGGTCCAGGTCATGGACAACCTGCAGAAGGCCGGTGTGTCGCGGGTCGGCCTGTCGGTGCAAACCGGCAACTGATCC AAAGCCGCTACCAGCACACC
Downstream 100 bases:
>100_bases CACGCGCCGGCAAGCGCCCGCATGCCGATACGATGGCCGCCGCCATCCATCCATCAGCTTGCCGCCCGCCCCTGTACCGA TCGGGTCATGGGGTTCTGGG
Product: TonB-like protein
Products: NA
Alternate protein names: LA-Related Transport Transmembrane Protein; NB Family Protein; NB-Like; NB C-Terminal; Membrane Spanning Protein In lA-TolQ-TolR Complex; NB Protein; Protein la; NB-Like Protein; NB Domain-Containing Protein; TOLA-Like Transport Transmembrane Protein
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MPSAADRLEFGPPRDTGYLRAFALALLAHILLMAALTWGVHWKRSDRAASFEAELWSSVPQEAAPKLVETPPPPPPPPEP KAPEVRVTPPTPNVDIALEQEKKRKLLQQQKEAETLKAQKLQEKLKAELQAKKEKEQKAKEELAKRKAAEEAQKTEAKKQ DAKDLEKKKQAEALAQKQRQDALNRMMGLAGATGDANAKGSGQKSSGPSAGYAGKVRARVLPNVVFTEDIAGNPTAEVEV RSTPDGVILGQRLVKSSGNKAWDEAVIKAIIRTGTLPRDDDGRVPTPMILEFKPKG
Sequences:
>Translated_296_residues MPSAADRLEFGPPRDTGYLRAFALALLAHILLMAALTWGVHWKRSDRAASFEAELWSSVPQEAAPKLVETPPPPPPPPEP KAPEVRVTPPTPNVDIALEQEKKRKLLQQQKEAETLKAQKLQEKLKAELQAKKEKEQKAKEELAKRKAAEEAQKTEAKKQ DAKDLEKKKQAEALAQKQRQDALNRMMGLAGATGDANAKGSGQKSSGPSAGYAGKVRARVLPNVVFTEDIAGNPTAEVEV RSTPDGVILGQRLVKSSGNKAWDEAVIKAIIRTGTLPRDDDGRVPTPMILEFKPKG >Mature_295_residues PSAADRLEFGPPRDTGYLRAFALALLAHILLMAALTWGVHWKRSDRAASFEAELWSSVPQEAAPKLVETPPPPPPPPEPK APEVRVTPPTPNVDIALEQEKKRKLLQQQKEAETLKAQKLQEKLKAELQAKKEKEQKAKEELAKRKAAEEAQKTEAKKQD AKDLEKKKQAEALAQKQRQDALNRMMGLAGATGDANAKGSGQKSSGPSAGYAGKVRARVLPNVVFTEDIAGNPTAEVEVR STPDGVILGQRLVKSSGNKAWDEAVIKAIIRTGTLPRDDDGRVPTPMILEFKPKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32273; Mature: 32142
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSAADRLEFGPPRDTGYLRAFALALLAHILLMAALTWGVHWKRSDRAASFEAELWSSVP CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC QEAAPKLVETPPPPPPPPEPKAPEVRVTPPTPNVDIALEQEKKRKLLQQQKEAETLKAQK HHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH LQEKLKAELQAKKEKEQKAKEELAKRKAAEEAQKTEAKKQDAKDLEKKKQAEALAQKQRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DALNRMMGLAGATGDANAKGSGQKSSGPSAGYAGKVRARVLPNVVFTEDIAGNPTAEVEV HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHEECCCCCCCCCEEEE RSTPDGVILGQRLVKSSGNKAWDEAVIKAIIRTGTLPRDDDGRVPTPMILEFKPKG CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCC >Mature Secondary Structure PSAADRLEFGPPRDTGYLRAFALALLAHILLMAALTWGVHWKRSDRAASFEAELWSSVP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC QEAAPKLVETPPPPPPPPEPKAPEVRVTPPTPNVDIALEQEKKRKLLQQQKEAETLKAQK HHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH LQEKLKAELQAKKEKEQKAKEELAKRKAAEEAQKTEAKKQDAKDLEKKKQAEALAQKQRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DALNRMMGLAGATGDANAKGSGQKSSGPSAGYAGKVRARVLPNVVFTEDIAGNPTAEVEV HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHEECCCCCCCCCEEEE RSTPDGVILGQRLVKSSGNKAWDEAVIKAIIRTGTLPRDDDGRVPTPMILEFKPKG CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA