The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91788753

Identifier: 91788753

GI number: 91788753

Start: 3051058

End: 3051948

Strand: Direct

Name: 91788753

Synonym: Bpro_2892

Alternate gene names: NA

Gene position: 3051058-3051948 (Clockwise)

Preceding gene: 91788752

Following gene: 91788755

Centisome position: 58.67

GC content: 60.27

Gene sequence:

>891_bases
ATGCCCAGCGCAGCAGACCGCCTTGAATTTGGCCCACCTCGCGATACGGGCTACTTGCGCGCTTTCGCCCTGGCGCTGCT
TGCCCACATTCTGTTGATGGCCGCGCTGACCTGGGGCGTCCACTGGAAACGCAGTGACCGGGCCGCCTCGTTTGAAGCCG
AGTTGTGGTCCAGCGTGCCGCAGGAGGCGGCGCCCAAGCTGGTCGAAACGCCTCCACCCCCTCCACCACCACCGGAGCCC
AAAGCGCCGGAAGTCAGGGTGACTCCACCCACGCCGAATGTGGACATTGCCCTGGAGCAGGAGAAAAAACGCAAGTTGCT
GCAGCAGCAAAAGGAAGCCGAGACGCTGAAGGCGCAGAAGCTGCAGGAAAAACTGAAAGCCGAGCTGCAGGCCAAAAAGG
AAAAAGAGCAAAAGGCCAAGGAGGAACTGGCCAAACGCAAGGCCGCTGAAGAAGCCCAGAAGACTGAAGCCAAAAAGCAG
GACGCCAAAGACCTGGAGAAGAAAAAGCAGGCTGAAGCCCTGGCACAAAAGCAGCGGCAGGATGCACTGAACCGCATGAT
GGGACTGGCGGGCGCCACGGGTGACGCCAATGCGAAAGGTTCAGGCCAAAAATCCAGCGGACCGTCTGCCGGCTATGCCG
GAAAAGTCAGGGCCAGGGTCTTGCCCAATGTGGTGTTCACCGAAGATATTGCCGGCAACCCCACGGCCGAAGTTGAAGTG
CGCAGCACACCCGACGGCGTCATCCTCGGCCAGCGGCTGGTCAAGTCAAGCGGCAACAAGGCTTGGGATGAGGCGGTGAT
CAAAGCCATCATTCGTACCGGCACCCTGCCGCGAGACGATGATGGGCGGGTTCCCACTCCGATGATTCTGGAATTCAAAC
CCAAAGGCTAG

Upstream 100 bases:

>100_bases
CCGTGGTCCAGGTCATGGACAACCTGCAGAAGGCCGGTGTGTCGCGGGTCGGCCTGTCGGTGCAAACCGGCAACTGATCC
AAAGCCGCTACCAGCACACC

Downstream 100 bases:

>100_bases
CACGCGCCGGCAAGCGCCCGCATGCCGATACGATGGCCGCCGCCATCCATCCATCAGCTTGCCGCCCGCCCCTGTACCGA
TCGGGTCATGGGGTTCTGGG

Product: TonB-like protein

Products: NA

Alternate protein names: LA-Related Transport Transmembrane Protein; NB Family Protein; NB-Like; NB C-Terminal; Membrane Spanning Protein In lA-TolQ-TolR Complex; NB Protein; Protein la; NB-Like Protein; NB Domain-Containing Protein; TOLA-Like Transport Transmembrane Protein

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MPSAADRLEFGPPRDTGYLRAFALALLAHILLMAALTWGVHWKRSDRAASFEAELWSSVPQEAAPKLVETPPPPPPPPEP
KAPEVRVTPPTPNVDIALEQEKKRKLLQQQKEAETLKAQKLQEKLKAELQAKKEKEQKAKEELAKRKAAEEAQKTEAKKQ
DAKDLEKKKQAEALAQKQRQDALNRMMGLAGATGDANAKGSGQKSSGPSAGYAGKVRARVLPNVVFTEDIAGNPTAEVEV
RSTPDGVILGQRLVKSSGNKAWDEAVIKAIIRTGTLPRDDDGRVPTPMILEFKPKG

Sequences:

>Translated_296_residues
MPSAADRLEFGPPRDTGYLRAFALALLAHILLMAALTWGVHWKRSDRAASFEAELWSSVPQEAAPKLVETPPPPPPPPEP
KAPEVRVTPPTPNVDIALEQEKKRKLLQQQKEAETLKAQKLQEKLKAELQAKKEKEQKAKEELAKRKAAEEAQKTEAKKQ
DAKDLEKKKQAEALAQKQRQDALNRMMGLAGATGDANAKGSGQKSSGPSAGYAGKVRARVLPNVVFTEDIAGNPTAEVEV
RSTPDGVILGQRLVKSSGNKAWDEAVIKAIIRTGTLPRDDDGRVPTPMILEFKPKG
>Mature_295_residues
PSAADRLEFGPPRDTGYLRAFALALLAHILLMAALTWGVHWKRSDRAASFEAELWSSVPQEAAPKLVETPPPPPPPPEPK
APEVRVTPPTPNVDIALEQEKKRKLLQQQKEAETLKAQKLQEKLKAELQAKKEKEQKAKEELAKRKAAEEAQKTEAKKQD
AKDLEKKKQAEALAQKQRQDALNRMMGLAGATGDANAKGSGQKSSGPSAGYAGKVRARVLPNVVFTEDIAGNPTAEVEVR
STPDGVILGQRLVKSSGNKAWDEAVIKAIIRTGTLPRDDDGRVPTPMILEFKPKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32273; Mature: 32142

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSAADRLEFGPPRDTGYLRAFALALLAHILLMAALTWGVHWKRSDRAASFEAELWSSVP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
QEAAPKLVETPPPPPPPPEPKAPEVRVTPPTPNVDIALEQEKKRKLLQQQKEAETLKAQK
HHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH
LQEKLKAELQAKKEKEQKAKEELAKRKAAEEAQKTEAKKQDAKDLEKKKQAEALAQKQRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DALNRMMGLAGATGDANAKGSGQKSSGPSAGYAGKVRARVLPNVVFTEDIAGNPTAEVEV
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHEECCCCCCCCCEEEE
RSTPDGVILGQRLVKSSGNKAWDEAVIKAIIRTGTLPRDDDGRVPTPMILEFKPKG
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCC
>Mature Secondary Structure 
PSAADRLEFGPPRDTGYLRAFALALLAHILLMAALTWGVHWKRSDRAASFEAELWSSVP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
QEAAPKLVETPPPPPPPPEPKAPEVRVTPPTPNVDIALEQEKKRKLLQQQKEAETLKAQK
HHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH
LQEKLKAELQAKKEKEQKAKEELAKRKAAEEAQKTEAKKQDAKDLEKKKQAEALAQKQRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DALNRMMGLAGATGDANAKGSGQKSSGPSAGYAGKVRARVLPNVVFTEDIAGNPTAEVEV
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHEECCCCCCCCCEEEE
RSTPDGVILGQRLVKSSGNKAWDEAVIKAIIRTGTLPRDDDGRVPTPMILEFKPKG
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA