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The map label for this gene is exbD [H]

Identifier: 91788752

GI number: 91788752

Start: 3050594

End: 3051034

Strand: Direct

Name: exbD [H]

Synonym: Bpro_2891

Alternate gene names: 91788752

Gene position: 3050594-3051034 (Clockwise)

Preceding gene: 91788751

Following gene: 91788753

Centisome position: 58.66

GC content: 63.49

Gene sequence:

>441_bases
ATGCCTGCAGTCACCTCCCGCGGCCGCGGCCGCGGCCGCCGTACCATCAGCGAAATCAACATGGTGCCGTTCATCGACGT
CATGCTCGTACTGCTGATCATCTTCATGGTCACCGCGCCGCTGATCACCCCCAGCATGATTGCCTTGCCCAAGGTTGGCA
AGGCCAGCAGCAAGCCGCCCAATCCGGTGCAGATCGAGATCGGCAAGGACGAGAAGGTCCAGATCAGGATCAAGACGGAC
GCCCTGCCCAGCAACGTGCGCAACGTGGCCGCCGACATCGTGAAGCGGGAGCCGGCCGTCAAGGCAGCGGGCGCCGATGC
GGTCCCGGTCGTCATCAGTGCCGACAAGTCCATCAAGTACGAAACCGTGGTCCAGGTCATGGACAACCTGCAGAAGGCCG
GTGTGTCGCGGGTCGGCCTGTCGGTGCAAACCGGCAACTGA

Upstream 100 bases:

>100_bases
AACCTGCTCAAGCAGGTTCGGAGCCGCGGGCTCCAGCCCCTCGGGGGCTGGCCTTGCTCGGGGCGGCCCTTCGCGGCGGC
CGTCCGCCTAGGAGATCGCC

Downstream 100 bases:

>100_bases
TCCAAAGCCGCTACCAGCACACCATGCCCAGCGCAGCAGACCGCCTTGAATTTGGCCCACCTCGCGATACGGGCTACTTG
CGCGCTTTCGCCCTGGCGCT

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MPAVTSRGRGRGRRTISEINMVPFIDVMLVLLIIFMVTAPLITPSMIALPKVGKASSKPPNPVQIEIGKDEKVQIRIKTD
ALPSNVRNVAADIVKREPAVKAAGADAVPVVISADKSIKYETVVQVMDNLQKAGVSRVGLSVQTGN

Sequences:

>Translated_146_residues
MPAVTSRGRGRGRRTISEINMVPFIDVMLVLLIIFMVTAPLITPSMIALPKVGKASSKPPNPVQIEIGKDEKVQIRIKTD
ALPSNVRNVAADIVKREPAVKAAGADAVPVVISADKSIKYETVVQVMDNLQKAGVSRVGLSVQTGN
>Mature_145_residues
PAVTSRGRGRGRRTISEINMVPFIDVMLVLLIIFMVTAPLITPSMIALPKVGKASSKPPNPVQIEIGKDEKVQIRIKTDA
LPSNVRNVAADIVKREPAVKAAGADAVPVVISADKSIKYETVVQVMDNLQKAGVSRVGLSVQTGN

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=132, Percent_Identity=39.3939393939394, Blast_Score=74, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003400
- InterPro:   IPR014170 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15582; Mature: 15450

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAVTSRGRGRGRRTISEINMVPFIDVMLVLLIIFMVTAPLITPSMIALPKVGKASSKPP
CCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCC
NPVQIEIGKDEKVQIRIKTDALPSNVRNVAADIVKREPAVKAAGADAVPVVISADKSIKY
CCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCH
ETVVQVMDNLQKAGVSRVGLSVQTGN
HHHHHHHHHHHHCCHHHHCEEEECCC
>Mature Secondary Structure 
PAVTSRGRGRGRRTISEINMVPFIDVMLVLLIIFMVTAPLITPSMIALPKVGKASSKPP
CCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCC
NPVQIEIGKDEKVQIRIKTDALPSNVRNVAADIVKREPAVKAAGADAVPVVISADKSIKY
CCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCH
ETVVQVMDNLQKAGVSRVGLSVQTGN
HHHHHHHHHHHHCCHHHHCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]