| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788703
Identifier: 91788703
GI number: 91788703
Start: 2995678
End: 2996622
Strand: Direct
Name: 91788703
Synonym: Bpro_2842
Alternate gene names: NA
Gene position: 2995678-2996622 (Clockwise)
Preceding gene: 91788702
Following gene: 91788704
Centisome position: 57.61
GC content: 61.38
Gene sequence:
>945_bases ATGTCATCCCGCGAAACCTTGCTCCTGGTGCAGAAATGCGCCCACACCTTCAGCTTTTACGACCTGGCCACCGGTCAGGC TAAAAAACACATCGTGCTGCCCAACTTTCCGCACGAGTTCACGGTAGACCCGGTGCGCCGGCGTGCCTATGTGGGCCACT ACGGCATCGAGACCGCCAGCCACCTGGGCGACGTGGGCGGGCACTCGGTCTTCGTGATCGATCTTGACAAGCAAGAGCAT GTGGCAACGCTGAATATCTGGCCCTTTTACCGCCCGCACGGCCTGACGGTAGATGCCGAAGGCCGTCTGTACGTGATGTC GGAGGCACACAACACGCTGCTGCGATTCTCCGACCCGATCAACCGTCATGTACCCGACCTGGCCGTGCCCTCCGGCGGCT ACAAGACCCATTTGTTTGCATTGACGAAAGATGCACAGACAGCCTATGCGCTGAACCTGCTGTCGAACACGGTCACCAAA ATCAAGCCGCACGACCCGACCTTCACACCGGTGGCCATGGTGCCGGGCCCGGTGCCCGAGGGCAATGTGCTGTCAGCGGA TGAGTCGCTGCTGTATGTAGCCAACCGGGGCGACGACACCATCGTCGCCGTCGACACGGCCAGCATGAAAGTCGTTGCGT CGGGCAAGACGCGGCGCGACCCGAACCGGGTCTACCGATTCCGCGGTGCGCAGGGCCAGGACCTGTTGCTCACCACCAAT TCGGGCGAGCAGTCGCTGTCCATCTTCGGCACCAATCTGCAGGAGCAGCGCTGCTTCGCCCTGCCCAGCAACCCGCTGGC CCTGTCCTTTCATCCGATGGACCGTGCGGTCTACATCTCGTTCCAGGACGAGACGGTGCGCCGCCTCAACCTCGACAGTT TCGAGTTCGAACAGGAGATCAAGACCCTGCGCGAACCGGATTCTTCCTACGTGTGGCAACACTGA
Upstream 100 bases:
>100_bases TGGCCACCAAGCAGAGCGCAAACTATTTCTCCCGCAGGCTCGGCTTACCCGAGCTGGCCCAAAACAAATAATCCATCAAC GAATCTCACGAAAGTTTGCC
Downstream 100 bases:
>100_bases CGTTCGCCCCACCTCATAAAGAAGCCGGGTACCCCCAATGAACCCCTCGCCCGCATCCAGAAATGTCATCTCCGTTGTGG ACGCCCACCATCATCTGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MSSRETLLLVQKCAHTFSFYDLATGQAKKHIVLPNFPHEFTVDPVRRRAYVGHYGIETASHLGDVGGHSVFVIDLDKQEH VATLNIWPFYRPHGLTVDAEGRLYVMSEAHNTLLRFSDPINRHVPDLAVPSGGYKTHLFALTKDAQTAYALNLLSNTVTK IKPHDPTFTPVAMVPGPVPEGNVLSADESLLYVANRGDDTIVAVDTASMKVVASGKTRRDPNRVYRFRGAQGQDLLLTTN SGEQSLSIFGTNLQEQRCFALPSNPLALSFHPMDRAVYISFQDETVRRLNLDSFEFEQEIKTLREPDSSYVWQH
Sequences:
>Translated_314_residues MSSRETLLLVQKCAHTFSFYDLATGQAKKHIVLPNFPHEFTVDPVRRRAYVGHYGIETASHLGDVGGHSVFVIDLDKQEH VATLNIWPFYRPHGLTVDAEGRLYVMSEAHNTLLRFSDPINRHVPDLAVPSGGYKTHLFALTKDAQTAYALNLLSNTVTK IKPHDPTFTPVAMVPGPVPEGNVLSADESLLYVANRGDDTIVAVDTASMKVVASGKTRRDPNRVYRFRGAQGQDLLLTTN SGEQSLSIFGTNLQEQRCFALPSNPLALSFHPMDRAVYISFQDETVRRLNLDSFEFEQEIKTLREPDSSYVWQH >Mature_313_residues SSRETLLLVQKCAHTFSFYDLATGQAKKHIVLPNFPHEFTVDPVRRRAYVGHYGIETASHLGDVGGHSVFVIDLDKQEHV ATLNIWPFYRPHGLTVDAEGRLYVMSEAHNTLLRFSDPINRHVPDLAVPSGGYKTHLFALTKDAQTAYALNLLSNTVTKI KPHDPTFTPVAMVPGPVPEGNVLSADESLLYVANRGDDTIVAVDTASMKVVASGKTRRDPNRVYRFRGAQGQDLLLTTNS GEQSLSIFGTNLQEQRCFALPSNPLALSFHPMDRAVYISFQDETVRRLNLDSFEFEQEIKTLREPDSSYVWQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35137; Mature: 35006
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRETLLLVQKCAHTFSFYDLATGQAKKHIVLPNFPHEFTVDPVRRRAYVGHYGIETAS CCCCHHHHHHHHHHHHHEEEEECCCCCCCEEECCCCCCCCCCCHHHHHEEECCCCCCHHH HLGDVGGHSVFVIDLDKQEHVATLNIWPFYRPHGLTVDAEGRLYVMSEAHNTLLRFSDPI HHCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEECCCCEEEEECCCCEEEEECCCH NRHVPDLAVPSGGYKTHLFALTKDAQTAYALNLLSNTVTKIKPHDPTFTPVAMVPGPVPE HHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHEEECCCCCCCCEEEECCCCCCC GNVLSADESLLYVANRGDDTIVAVDTASMKVVASGKTRRDPNRVYRFRGAQGQDLLLTTN CCEEECCCCEEEEEECCCCEEEEEECCCEEEEECCCCCCCCCCEEEECCCCCCEEEEEEC SGEQSLSIFGTNLQEQRCFALPSNPLALSFHPMDRAVYISFQDETVRRLNLDSFEFEQEI CCCCEEEEEECCCCCCEEEECCCCCEEEEEECCCEEEEEEECCCHHEECCCCCHHHHHHH KTLREPDSSYVWQH HHHHCCCCCCCCCC >Mature Secondary Structure SSRETLLLVQKCAHTFSFYDLATGQAKKHIVLPNFPHEFTVDPVRRRAYVGHYGIETAS CCCHHHHHHHHHHHHHEEEEECCCCCCCEEECCCCCCCCCCCHHHHHEEECCCCCCHHH HLGDVGGHSVFVIDLDKQEHVATLNIWPFYRPHGLTVDAEGRLYVMSEAHNTLLRFSDPI HHCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEECCCCEEEEECCCCEEEEECCCH NRHVPDLAVPSGGYKTHLFALTKDAQTAYALNLLSNTVTKIKPHDPTFTPVAMVPGPVPE HHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHEEECCCCCCCCEEEECCCCCCC GNVLSADESLLYVANRGDDTIVAVDTASMKVVASGKTRRDPNRVYRFRGAQGQDLLLTTN CCEEECCCCEEEEEECCCCEEEEEECCCEEEEECCCCCCCCCCEEEECCCCCCEEEEEEC SGEQSLSIFGTNLQEQRCFALPSNPLALSFHPMDRAVYISFQDETVRRLNLDSFEFEQEI CCCCEEEEEECCCCCCEEEECCCCCEEEEEECCCEEEEEEECCCHHEECCCCCHHHHHHH KTLREPDSSYVWQH HHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA