| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788704
Identifier: 91788704
GI number: 91788704
Start: 2996660
End: 2997604
Strand: Direct
Name: 91788704
Synonym: Bpro_2843
Alternate gene names: NA
Gene position: 2996660-2997604 (Clockwise)
Preceding gene: 91788703
Following gene: 91788705
Centisome position: 57.63
GC content: 62.43
Gene sequence:
>945_bases ATGAACCCCTCGCCCGCATCCAGAAATGTCATCTCCGTTGTGGACGCCCACCATCATCTGTGGGACTTGTCGCTGGGCCG CTATCCCTGGTTGCAGCAGGCGTATGACCCAAAGACCTTCTTTCTGGGCGACTATGCCGCGTTGCGCCAGGACTTTTTGC CAAAGGACTACCGCGCCGCCAGCGCTGGTGTTCAGGTGCTGGCGACGGTGCACGTAGAGGCCGAACGCGACCGCAGCGAG CAGGTGGCAGAAACCGCCTGGCTGCATGACATGAACGCCGCGCACGGCATCCCTAACGCGGTGGTGGCGCATGCCTGGTT CGACCGGCCAGATACGGAAGAGTACCTGCTCAGCCATTTGCGCTATCCACTGGTGCGAGGTATTCGCAGCAAGCCTGTGA CTTCTGCAACGCCAGCGCAAAGCGTGGCCGGGCAACCGGGCTCCATGCAGGACGAAGCCTGGTTGCGCGGCTTCTCACTG CTGCGAAAACACGGTCTGAGCTGGGACCTGCGGGTACCGGCCTGGCATTTGCCCGAGGCTGCGCAGGTGGCGCAGATGTT CCCGGATGTGCCCATGGTGCTCAATCACCACGGCTTTGCCTGGGACCGCAGCGAGGAAGGCCTCAAGCGCTGGCGTGGCT GGATGGAAGTGCTGGCACGACAGCCCAACGTGCATGTGAAGCTGTCCGAATTCGGCCTGCGCGACCAGCCCTGGAATGAA CAGTCCAATGCACGCATAGTGCGCGACACGCTGGCCATCTTCGGCTGGGAGCGCTGCATGTTCGCCAGCAACTTTCCGGT GGCCAGCTTGCGCATCGGATTTCGACCCCTGGTAGAGGCTGTGTGGCGCATGCTGGACAAGCTCGCACCCGATCAGCGCC AGGCCGTGATGAGCGGTAACGCGCTGCGCTTTTACCGTATCAATCTTCCACCTGCCCAGACCTGA
Upstream 100 bases:
>100_bases GAGTTCGAACAGGAGATCAAGACCCTGCGCGAACCGGATTCTTCCTACGTGTGGCAACACTGACGTTCGCCCCACCTCAT AAAGAAGCCGGGTACCCCCA
Downstream 100 bases:
>100_bases CTCCATGAACAACTTCAACAACCTCATCAATGGCCAATGGTTGGCCGGCAACAGCACCAGCGCCAACCGGAACCCATCCA ACCTCGCTGACGTCATCGGC
Product: amidohydrolase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MNPSPASRNVISVVDAHHHLWDLSLGRYPWLQQAYDPKTFFLGDYAALRQDFLPKDYRAASAGVQVLATVHVEAERDRSE QVAETAWLHDMNAAHGIPNAVVAHAWFDRPDTEEYLLSHLRYPLVRGIRSKPVTSATPAQSVAGQPGSMQDEAWLRGFSL LRKHGLSWDLRVPAWHLPEAAQVAQMFPDVPMVLNHHGFAWDRSEEGLKRWRGWMEVLARQPNVHVKLSEFGLRDQPWNE QSNARIVRDTLAIFGWERCMFASNFPVASLRIGFRPLVEAVWRMLDKLAPDQRQAVMSGNALRFYRINLPPAQT
Sequences:
>Translated_314_residues MNPSPASRNVISVVDAHHHLWDLSLGRYPWLQQAYDPKTFFLGDYAALRQDFLPKDYRAASAGVQVLATVHVEAERDRSE QVAETAWLHDMNAAHGIPNAVVAHAWFDRPDTEEYLLSHLRYPLVRGIRSKPVTSATPAQSVAGQPGSMQDEAWLRGFSL LRKHGLSWDLRVPAWHLPEAAQVAQMFPDVPMVLNHHGFAWDRSEEGLKRWRGWMEVLARQPNVHVKLSEFGLRDQPWNE QSNARIVRDTLAIFGWERCMFASNFPVASLRIGFRPLVEAVWRMLDKLAPDQRQAVMSGNALRFYRINLPPAQT >Mature_314_residues MNPSPASRNVISVVDAHHHLWDLSLGRYPWLQQAYDPKTFFLGDYAALRQDFLPKDYRAASAGVQVLATVHVEAERDRSE QVAETAWLHDMNAAHGIPNAVVAHAWFDRPDTEEYLLSHLRYPLVRGIRSKPVTSATPAQSVAGQPGSMQDEAWLRGFSL LRKHGLSWDLRVPAWHLPEAAQVAQMFPDVPMVLNHHGFAWDRSEEGLKRWRGWMEVLARQPNVHVKLSEFGLRDQPWNE QSNARIVRDTLAIFGWERCMFASNFPVASLRIGFRPLVEAVWRMLDKLAPDQRQAVMSGNALRFYRINLPPAQT
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006992 [H]
Pfam domain/function: PF04909 Amidohydro_2 [H]
EC number: NA
Molecular weight: Translated: 35839; Mature: 35839
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSPASRNVISVVDAHHHLWDLSLGRYPWLQQAYDPKTFFLGDYAALRQDFLPKDYRAA CCCCCCCCCHHHHHHHHHHHEECCCCCCCCHHHHCCCCEEEECCHHHHHHHCCCCHHHHH SAGVQVLATVHVEAERDRSEQVAETAWLHDMNAAHGIPNAVVAHAWFDRPDTEEYLLSHL HHCEEEEEEEEEEHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHCCCCCHHHHHHHHH RYPLVRGIRSKPVTSATPAQSVAGQPGSMQDEAWLRGFSLLRKHGLSWDLRVPAWHLPEA HHHHHHCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHH AQVAQMFPDVPMVLNHHGFAWDRSEEGLKRWRGWMEVLARQPNVHVKLSEFGLRDQPWNE HHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC QSNARIVRDTLAIFGWERCMFASNFPVASLRIGFRPLVEAVWRMLDKLAPDQRQAVMSGN CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHCCC ALRFYRINLPPAQT CEEEEEECCCCCCC >Mature Secondary Structure MNPSPASRNVISVVDAHHHLWDLSLGRYPWLQQAYDPKTFFLGDYAALRQDFLPKDYRAA CCCCCCCCCHHHHHHHHHHHEECCCCCCCCHHHHCCCCEEEECCHHHHHHHCCCCHHHHH SAGVQVLATVHVEAERDRSEQVAETAWLHDMNAAHGIPNAVVAHAWFDRPDTEEYLLSHL HHCEEEEEEEEEEHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHCCCCCHHHHHHHHH RYPLVRGIRSKPVTSATPAQSVAGQPGSMQDEAWLRGFSLLRKHGLSWDLRVPAWHLPEA HHHHHHCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHH AQVAQMFPDVPMVLNHHGFAWDRSEEGLKRWRGWMEVLARQPNVHVKLSEFGLRDQPWNE HHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC QSNARIVRDTLAIFGWERCMFASNFPVASLRIGFRPLVEAVWRMLDKLAPDQRQAVMSGN CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHCCC ALRFYRINLPPAQT CEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]