| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788682
Identifier: 91788682
GI number: 91788682
Start: 2965626
End: 2966234
Strand: Direct
Name: 91788682
Synonym: Bpro_2820
Alternate gene names: NA
Gene position: 2965626-2966234 (Clockwise)
Preceding gene: 91788681
Following gene: 91788686
Centisome position: 57.03
GC content: 69.46
Gene sequence:
>609_bases ATGTCCGAGTGGTGGACCTACCGTCTCTCGGACTTCCTGATGTTTTCACCCGGGACGTATTGGCGCCTGGTCGAGCTCTA CAACCGCGATGTCTGGCCAGCGCAGCTGGTCGCACTCGCTACCGGTCTCGCCTCGCTTTGGCTGGCCGGGACCCGGCGCG CCGGCGCCGGCCGCGTGCTCGCTGCCCTGCTCGCCGCAGTCTGGCTCTGGGTGGGCTGGACCTTTCACTGGCAGCACTAC GCCACGATCAACTGGGCGGCGCCCTACTTCGCCGCGGCCTTCGGCATCCAGGCCGTGCTGCTGGTTGGCCTGTGCATCTT GTCCCGCGACGCGCACCCACCGAGCCCTGGTGTTGTGACGCGAAACCTCGGCTGGCTGCTGGCCGTGACCGGCGTGGTGC TCTACCCGCTGGCCGGGCTGCTCGCTGGCCACCCGTTGAGCCAAGCGGAGGTGTTCGGCATGGCGCCGGAGCCGACGGCG CTGGCCAGCCTGGGCCTGCTGCTGGCCAGCGGTCAGCCGCCATCACGCGCCCTGCGCTACTTGCTGGCCATCATTCCCAC GCTCTCCCTGCTGGTGGGCGCGGCGACGTTGTGGTCGATGGCTGGCTGA
Upstream 100 bases:
>100_bases CGTGGCCCACGTGCGCGAAAACATGGGTGCAGCCTTCGGCCGGATGCCTGACGAGGCGTTTCGCAGGCGCATGGTCACCC ACACCCTGGGGCTGTGAGCC
Downstream 100 bases:
>100_bases TCGCCTTATTCCTCTTTCAGTACGCCACCGCGTAGCGATAGCCGCGGTACCGCAGCACTGCGGTCCTGGCACGGATCTGC TCCAGCACCACGCCCGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MSEWWTYRLSDFLMFSPGTYWRLVELYNRDVWPAQLVALATGLASLWLAGTRRAGAGRVLAALLAAVWLWVGWTFHWQHY ATINWAAPYFAAAFGIQAVLLVGLCILSRDAHPPSPGVVTRNLGWLLAVTGVVLYPLAGLLAGHPLSQAEVFGMAPEPTA LASLGLLLASGQPPSRALRYLLAIIPTLSLLVGAATLWSMAG
Sequences:
>Translated_202_residues MSEWWTYRLSDFLMFSPGTYWRLVELYNRDVWPAQLVALATGLASLWLAGTRRAGAGRVLAALLAAVWLWVGWTFHWQHY ATINWAAPYFAAAFGIQAVLLVGLCILSRDAHPPSPGVVTRNLGWLLAVTGVVLYPLAGLLAGHPLSQAEVFGMAPEPTA LASLGLLLASGQPPSRALRYLLAIIPTLSLLVGAATLWSMAG >Mature_201_residues SEWWTYRLSDFLMFSPGTYWRLVELYNRDVWPAQLVALATGLASLWLAGTRRAGAGRVLAALLAAVWLWVGWTFHWQHYA TINWAAPYFAAAFGIQAVLLVGLCILSRDAHPPSPGVVTRNLGWLLAVTGVVLYPLAGLLAGHPLSQAEVFGMAPEPTAL ASLGLLLASGQPPSRALRYLLAIIPTLSLLVGAATLWSMAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21822; Mature: 21691
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEWWTYRLSDFLMFSPGTYWRLVELYNRDVWPAQLVALATGLASLWLAGTRRAGAGRVL CCCCHHHHHHHHEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH AALLAAVWLWVGWTFHWQHYATINWAAPYFAAAFGIQAVLLVGLCILSRDAHPPSPGVVT HHHHHHHHHHHCHHEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE RNLGWLLAVTGVVLYPLAGLLAGHPLSQAEVFGMAPEPTALASLGLLLASGQPPSRALRY CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHH LLAIIPTLSLLVGAATLWSMAG HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEWWTYRLSDFLMFSPGTYWRLVELYNRDVWPAQLVALATGLASLWLAGTRRAGAGRVL CCCHHHHHHHHEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH AALLAAVWLWVGWTFHWQHYATINWAAPYFAAAFGIQAVLLVGLCILSRDAHPPSPGVVT HHHHHHHHHHHCHHEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE RNLGWLLAVTGVVLYPLAGLLAGHPLSQAEVFGMAPEPTALASLGLLLASGQPPSRALRY CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHH LLAIIPTLSLLVGAATLWSMAG HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA