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The map label for this gene is yeaM [H]

Identifier: 91788686

GI number: 91788686

Start: 2970794

End: 2971597

Strand: Direct

Name: yeaM [H]

Synonym: Bpro_2825

Alternate gene names: 91788686

Gene position: 2970794-2971597 (Clockwise)

Preceding gene: 91788682

Following gene: 91788687

Centisome position: 57.13

GC content: 68.16

Gene sequence:

>804_bases
ATGCCGGTGGACGACACCGATAACTTCACGCCCAGCCGGCAGCGCCCCGTGCGCGTGCGTGCCCGCGCCATGCCGGTCGA
CACGCACTTTCAGCCGCACTCCCATGCCTGGGCACAACTGGCCTATTGCGCCACCGGTGTCGTGCAGGTCACGGCCGAGC
AAGGTGGCAACGCCGGCGGCGAGATCACCTACATCGTGCCGCCGTCGCGCGCGGTCTGGATTGCCCCCGGTGCGCGGCAT
CACGTCACGGTGCTGGAAGCCGCCGAGCTGCGCACGCTCTACATCGATGCGAGCGTCACGCCCGGAGGCTGGGAAGGTTG
CCGCGTCATGGTGGTGTCGCCCTTGCTGCGGGAGTCGATTCATGCGCTGGACACATCCTCCGGCCCGCCCCTGACCGCGG
CGCGCGAACAGTTGCTCAGCGCCCTGGTGCTTGACGAGATCACCCATGCCGACACCCAGGCGCTGGGCGTGCCGCTGCCG
CATCCGCAAACCGGTGACAAGCGGCTGCGCGCGCTGTGCACGGCCGTTTTGGGTGCCCCCTCGGAACGCGCGACGCTGGC
GGAATGGGCCGCCGAAATTGGCGCCAGCGAGCGCACGGTGGCGCGCCTCTTTCGCGACGAACTGGGCATGAGCTACCAGC
AGTGGCGCCAGCAGGCCGTCCTGGCGCACGCCCTGCCCTTGCTGGCGCGCGGCACACCGGTGAGCCTGGTAGCCGCTGCC
AGTGGCTATGCAAGTGACAGTGCGTTTTCAGCGATGTTCAAATCCGCGATGGGTCAGACCCCTAGCCACTTTCAAAGCAA
GTAG

Upstream 100 bases:

>100_bases
CGACAAAAAGCCATGATTCAGCGAATTTCAGACAAACCATCAACAACCCTCCCCTCAAGGACGCCGCAGCACCGTGGCCC
GTAACACCCGCCTTCAGTTC

Downstream 100 bases:

>100_bases
CCCGTCGACCTCATTAAAACCCGGGAAATTAACTATCAAAATAATAGCGCTCGCCTATTCATTCGCCGGCGTGACTCCGG
GAGCGGCAGGTCATCCGCGA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MPVDDTDNFTPSRQRPVRVRARAMPVDTHFQPHSHAWAQLAYCATGVVQVTAEQGGNAGGEITYIVPPSRAVWIAPGARH
HVTVLEAAELRTLYIDASVTPGGWEGCRVMVVSPLLRESIHALDTSSGPPLTAAREQLLSALVLDEITHADTQALGVPLP
HPQTGDKRLRALCTAVLGAPSERATLAEWAAEIGASERTVARLFRDELGMSYQQWRQQAVLAHALPLLARGTPVSLVAAA
SGYASDSAFSAMFKSAMGQTPSHFQSK

Sequences:

>Translated_267_residues
MPVDDTDNFTPSRQRPVRVRARAMPVDTHFQPHSHAWAQLAYCATGVVQVTAEQGGNAGGEITYIVPPSRAVWIAPGARH
HVTVLEAAELRTLYIDASVTPGGWEGCRVMVVSPLLRESIHALDTSSGPPLTAAREQLLSALVLDEITHADTQALGVPLP
HPQTGDKRLRALCTAVLGAPSERATLAEWAAEIGASERTVARLFRDELGMSYQQWRQQAVLAHALPLLARGTPVSLVAAA
SGYASDSAFSAMFKSAMGQTPSHFQSK
>Mature_266_residues
PVDDTDNFTPSRQRPVRVRARAMPVDTHFQPHSHAWAQLAYCATGVVQVTAEQGGNAGGEITYIVPPSRAVWIAPGARHH
VTVLEAAELRTLYIDASVTPGGWEGCRVMVVSPLLRESIHALDTSSGPPLTAAREQLLSALVLDEITHADTQALGVPLPH
PQTGDKRLRALCTAVLGAPSERATLAEWAAEIGASERTVARLFRDELGMSYQQWRQQAVLAHALPLLARGTPVSLVAAAS
GYASDSAFSAMFKSAMGQTPSHFQSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788091, Length=239, Percent_Identity=33.0543933054393, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR003313
- InterPro:   IPR018062
- InterPro:   IPR018060
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02311 AraC_binding [H]

EC number: NA

Molecular weight: Translated: 28615; Mature: 28484

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVDDTDNFTPSRQRPVRVRARAMPVDTHFQPHSHAWAQLAYCATGVVQVTAEQGGNAGG
CCCCCCCCCCCCCCCCEEEHEEECCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCC
EITYIVPPSRAVWIAPGARHHVTVLEAAELRTLYIDASVTPGGWEGCRVMVVSPLLRESI
EEEEEECCCCEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCEEECHHHHHHH
HALDTSSGPPLTAAREQLLSALVLDEITHADTQALGVPLPHPQTGDKRLRALCTAVLGAP
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
SERATLAEWAAEIGASERTVARLFRDELGMSYQQWRQQAVLAHALPLLARGTPVSLVAAA
CCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
SGYASDSAFSAMFKSAMGQTPSHFQSK
CCCCCHHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure 
PVDDTDNFTPSRQRPVRVRARAMPVDTHFQPHSHAWAQLAYCATGVVQVTAEQGGNAGG
CCCCCCCCCCCCCCCEEEHEEECCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCC
EITYIVPPSRAVWIAPGARHHVTVLEAAELRTLYIDASVTPGGWEGCRVMVVSPLLRESI
EEEEEECCCCEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCEEECHHHHHHH
HALDTSSGPPLTAAREQLLSALVLDEITHADTQALGVPLPHPQTGDKRLRALCTAVLGAP
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
SERATLAEWAAEIGASERTVARLFRDELGMSYQQWRQQAVLAHALPLLARGTPVSLVAAA
CCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
SGYASDSAFSAMFKSAMGQTPSHFQSK
CCCCCHHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]