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The map label for this gene is ydfF [H]

Identifier: 91788670

GI number: 91788670

Start: 2952425

End: 2953123

Strand: Direct

Name: ydfF [H]

Synonym: Bpro_2808

Alternate gene names: 91788670

Gene position: 2952425-2953123 (Clockwise)

Preceding gene: 91788667

Following gene: 91788672

Centisome position: 56.77

GC content: 65.81

Gene sequence:

>699_bases
ATGAATGCAGAACCCGACCTTGCCAGGCTGGCATCCACCGTGGGCGATCCGCGCCGCATCCAGATGCTGGCACTGCTGAT
GGAAGGCCGCGCACTCACCGCAAAGGAACTGGCGCTCGGCGCGGGGATTGAGCCCGCCACAGCCACGTCGCACCTCAAAC
GGCTGCTTGACGATGGCCTGCTGGTATCCACGTCACAGGGCCGCCACAAGTATTTCCGCCTGGCCTCAGAGCACGTGGCC
CATCTGGTGGAGTCGCTGATGCGCGTTGCGCCGCGCACGACAGAACCCGCGAGCCCTGCAGGTCTTGAGCCGATCCGCCG
GGCACGCTACTGTTATGACCATCTCGCCGGCGAACTCGGTACCACCCTGCTGGCCGTGATGCGCCGCAAAAGCTGGCTGG
TGGCAGACACCAGCCAGAACCTGCCGAAGGCCCTTGCACTTTCGCCCAAAGGCGATCAGGCCCTCGGCGCGCTGGGCATC
GACGTCACCGAGGTGCGCGGCAGGCGCCGGCAGTTTGCCTGCACCTGCCTGGACTGGTCGGAGCGGCAGGACCACCTCGG
CGGTGCGCTCGGTGCCGCGCTGGCAACGCACTTCACGCAGCAGCGCTGGATAGAGCGTAAAAAACACACGCGCGTGGTGA
GCATCACCGCCGCAGGCACAGAGCAATTAAAGCGCCTCGGCATCAAGCTGCGGACCTGA

Upstream 100 bases:

>100_bases
ACTGGGCCATGGTTGCTCGCTCTGTTTGTTTGACAAGACCTCCAGTGTCGCCAGCCTTCCCCCGCTTGTCGAGCAACAAC
AGTTTGGTTAGGATCAAACC

Downstream 100 bases:

>100_bases
GCCGCAACCGCTGTGCGGTGAAACTCAAGCGTCAGGCGTCCAGCGGCGGCATCACAGCAACGCCGTCATGTCGGCATAGA
GCCAGTCACCACCGGGGTAG

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MNAEPDLARLASTVGDPRRIQMLALLMEGRALTAKELALGAGIEPATATSHLKRLLDDGLLVSTSQGRHKYFRLASEHVA
HLVESLMRVAPRTTEPASPAGLEPIRRARYCYDHLAGELGTTLLAVMRRKSWLVADTSQNLPKALALSPKGDQALGALGI
DVTEVRGRRRQFACTCLDWSERQDHLGGALGAALATHFTQQRWIERKKHTRVVSITAAGTEQLKRLGIKLRT

Sequences:

>Translated_232_residues
MNAEPDLARLASTVGDPRRIQMLALLMEGRALTAKELALGAGIEPATATSHLKRLLDDGLLVSTSQGRHKYFRLASEHVA
HLVESLMRVAPRTTEPASPAGLEPIRRARYCYDHLAGELGTTLLAVMRRKSWLVADTSQNLPKALALSPKGDQALGALGI
DVTEVRGRRRQFACTCLDWSERQDHLGGALGAALATHFTQQRWIERKKHTRVVSITAAGTEQLKRLGIKLRT
>Mature_232_residues
MNAEPDLARLASTVGDPRRIQMLALLMEGRALTAKELALGAGIEPATATSHLKRLLDDGLLVSTSQGRHKYFRLASEHVA
HLVESLMRVAPRTTEPASPAGLEPIRRARYCYDHLAGELGTTLLAVMRRKSWLVADTSQNLPKALALSPKGDQALGALGI
DVTEVRGRRRQFACTCLDWSERQDHLGGALGAALATHFTQQRWIERKKHTRVVSITAAGTEQLKRLGIKLRT

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 25440; Mature: 25440

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAEPDLARLASTVGDPRRIQMLALLMEGRALTAKELALGAGIEPATATSHLKRLLDDGL
CCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCE
LVSTSQGRHKYFRLASEHVAHLVESLMRVAPRTTEPASPAGLEPIRRARYCYDHLAGELG
EEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TTLLAVMRRKSWLVADTSQNLPKALALSPKGDQALGALGIDVTEVRGRRRQFACTCLDWS
HHHHHHHHHCCCEEECCCCCCCHHEEECCCCCCHHHHHCCCHHHHHCCHHHHEEEECCHH
ERQDHLGGALGAALATHFTQQRWIERKKHTRVVSITAAGTEQLKRLGIKLRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHCCCCCC
>Mature Secondary Structure
MNAEPDLARLASTVGDPRRIQMLALLMEGRALTAKELALGAGIEPATATSHLKRLLDDGL
CCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCE
LVSTSQGRHKYFRLASEHVAHLVESLMRVAPRTTEPASPAGLEPIRRARYCYDHLAGELG
EEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TTLLAVMRRKSWLVADTSQNLPKALALSPKGDQALGALGIDVTEVRGRRRQFACTCLDWS
HHHHHHHHHCCCEEECCCCCCCHHEEECCCCCCHHHHHCCCHHHHHCCHHHHEEEECCHH
ERQDHLGGALGAALATHFTQQRWIERKKHTRVVSITAAGTEQLKRLGIKLRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]