| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is osmY [C]
Identifier: 91788660
GI number: 91788660
Start: 2939146
End: 2939979
Strand: Direct
Name: osmY [C]
Synonym: Bpro_2798
Alternate gene names: 91788660
Gene position: 2939146-2939979 (Clockwise)
Preceding gene: 91788659
Following gene: 91788662
Centisome position: 56.52
GC content: 64.87
Gene sequence:
>834_bases ATGCCAGTAATCGCCATGACCCAGGAGATGGGCTCCCTCGCCAAGGACGTCTCCCTGCAGCTTGCCCAGACAGCCAATCT GGCTGTGATGCGCCATGAGGTGCAGGAACATGTGGCCGATCGGATGCACGTGCCCAGCAGCCTGATCAGCCGGCTGCGCG AAGGCAAGGCCGGCCTGGTCGAGCGCCTGACCACGGACAAGGAGCGGGTGGCGGTGTACACGGCGCAGGAAGTTTTTGCG CTGGCCGATCAGGGCAATATCGTGCTGCGCGGCTGGGGAGCGACCTGCCTGTTGCGTCCGGTTCCGCATGTGGTGCGAGT GCGGGTAACCCGCCCGTTCAGGAAGCGCGTGGCGTGGCTGATGGACCATCTGGGAACAGACGACGAGGCGTTCGCCGAAG CCGAGGTCCATCGCAGCGACAGCGCCCACGCTTCCCGGATGCACGAACAGTTCGGCGTGACCTGGGGTGACCCGCTGCTC TACGATCTGGTACTCAACACCGATCGTGTGTCCGTGGACAGCTGCGTGGCCCAGATCCAGCATCTGGCCAGCCGGCCGGA ATTCCAGGAAACCGCGGCGTCAAAGGCAATGCTGGCAAACCTGGCGCTCAACGCGCGCGTCCGCGCGGCACTGAAAGACC AGGAATCGACCCGCGATATCAACATCAGCATCGATTCCGACGCAGGCCAGATGGTCCTCAGCGGGATCGTCCTGAACGCG CAGGAAAGCGCGGAAGCGGCCAGGGTCGCCGGCACGGTGCCCGGCGTCACCCGCGTTGACAACCAGTTGCGCCTGATGGC CACAACCCGGCGTTTCGCTGCAGCCAAGCACTGA
Upstream 100 bases:
>100_bases TGGCCGCTGATCTCCCGCATTCTGGCCAAAATTCGCCCTCCAAAGCATGCGGCGTTCACAACAGAACAACCTGTTGATTG ATTAATCAGGGAAAGACACC
Downstream 100 bases:
>100_bases ATGCTGCCTGTCATTGCGGGCTTGACCCGCAATCCATGACCCCCTGAATTCATGGATGCCGGATCGAGTCCGGCATGACA GCCGGGGAGCATGGATGCAG
Product: transport protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MPVIAMTQEMGSLAKDVSLQLAQTANLAVMRHEVQEHVADRMHVPSSLISRLREGKAGLVERLTTDKERVAVYTAQEVFA LADQGNIVLRGWGATCLLRPVPHVVRVRVTRPFRKRVAWLMDHLGTDDEAFAEAEVHRSDSAHASRMHEQFGVTWGDPLL YDLVLNTDRVSVDSCVAQIQHLASRPEFQETAASKAMLANLALNARVRAALKDQESTRDINISIDSDAGQMVLSGIVLNA QESAEAARVAGTVPGVTRVDNQLRLMATTRRFAAAKH
Sequences:
>Translated_277_residues MPVIAMTQEMGSLAKDVSLQLAQTANLAVMRHEVQEHVADRMHVPSSLISRLREGKAGLVERLTTDKERVAVYTAQEVFA LADQGNIVLRGWGATCLLRPVPHVVRVRVTRPFRKRVAWLMDHLGTDDEAFAEAEVHRSDSAHASRMHEQFGVTWGDPLL YDLVLNTDRVSVDSCVAQIQHLASRPEFQETAASKAMLANLALNARVRAALKDQESTRDINISIDSDAGQMVLSGIVLNA QESAEAARVAGTVPGVTRVDNQLRLMATTRRFAAAKH >Mature_276_residues PVIAMTQEMGSLAKDVSLQLAQTANLAVMRHEVQEHVADRMHVPSSLISRLREGKAGLVERLTTDKERVAVYTAQEVFAL ADQGNIVLRGWGATCLLRPVPHVVRVRVTRPFRKRVAWLMDHLGTDDEAFAEAEVHRSDSAHASRMHEQFGVTWGDPLLY DLVLNTDRVSVDSCVAQIQHLASRPEFQETAASKAMLANLALNARVRAALKDQESTRDINISIDSDAGQMVLSGIVLNAQ ESAEAARVAGTVPGVTRVDNQLRLMATTRRFAAAKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 2960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 780 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 160 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 80 Molecules/Cell In: Stati
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30459; Mature: 30328
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: PS50914 BON
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVIAMTQEMGSLAKDVSLQLAQTANLAVMRHEVQEHVADRMHVPSSLISRLREGKAGLV CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHH ERLTTDKERVAVYTAQEVFALADQGNIVLRGWGATCLLRPVPHVVRVRVTRPFRKRVAWL HHHCCCCHHEEEEEHHHHHHHCCCCCEEEEECCCEEEECCCCCCEEEEECCHHHHHHHHH MDHLGTDDEAFAEAEVHRSDSAHASRMHEQFGVTWGDPLLYDLVLNTDRVSVDSCVAQIQ HHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHH HLASRPEFQETAASKAMLANLALNARVRAALKDQESTRDINISIDSDAGQMVLSGIVLNA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCC QESAEAARVAGTVPGVTRVDNQLRLMATTRRFAAAKH HHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHCCC >Mature Secondary Structure PVIAMTQEMGSLAKDVSLQLAQTANLAVMRHEVQEHVADRMHVPSSLISRLREGKAGLV CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHH ERLTTDKERVAVYTAQEVFALADQGNIVLRGWGATCLLRPVPHVVRVRVTRPFRKRVAWL HHHCCCCHHEEEEEHHHHHHHCCCCCEEEEECCCEEEECCCCCCEEEEECCHHHHHHHHH MDHLGTDDEAFAEAEVHRSDSAHASRMHEQFGVTWGDPLLYDLVLNTDRVSVDSCVAQIQ HHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHH HLASRPEFQETAASKAMLANLALNARVRAALKDQESTRDINISIDSDAGQMVLSGIVLNA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCC QESAEAARVAGTVPGVTRVDNQLRLMATTRRFAAAKH HHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA