| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is sgaA [H]
Identifier: 91788615
GI number: 91788615
Start: 2893805
End: 2895025
Strand: Reverse
Name: sgaA [H]
Synonym: Bpro_2753
Alternate gene names: 91788615
Gene position: 2895025-2893805 (Counterclockwise)
Preceding gene: 91788622
Following gene: 91788614
Centisome position: 55.67
GC content: 64.7
Gene sequence:
>1221_bases ATGCTGACGCTCGACTTTCACCCCACCGGCCGCCATTTTCTGCAGATTCCCGGCCCGTCACCGGTACCTGACCGCATTTT GCGGGCCATGAGCCTGCCCACGATTGATCACCGGGGGCCCGAGTTTGCGGCGCTGGGCCTCAAGGTGCTGGCCGACATCC GCAAAATCTTCCAGACCCGCCAGCCCGTCATCATCTACCCGGCCTCGGGTACGGGCGCATGGGAGGCGGCGCTAGCCAAT ACGCTGAGCCCGGGCGACCATGTGCTGATGTACGAAACCGGTCACTTTGCCGCACTGTGGCACAAACTCGCAGCGCGCCT GGGCCTGAAAACCGAAGTGATGAGCTTGTCCGGCCCGGAAGCCTGGCGCCATGGCGTGCGGGCCGACATGATCGAGGAGC GGCTGAAGGCGGACACGCAGCACGCTATCCGCGCAGTCTGTGTGGTGCACAACGAAACCTCCACCGGCGTAACCAGCAAC ATCGTGGCCGTGCGCAAGGCCATCGATGCCGCCAAACACCCGGCGCTGCTGCTGGTGGACACCATCTCCGGCCTGGCGTC GGCCGACTACCGGCACGACGAGTGGGGTGTGGACGTCAGCATCAGCGGCTCGCAGAAAGGCCTGATGCTGCCGCCCGGCA TCAGTTTCAACGCCGTGTCGGCCAAGGCCCTTGAAGCCAGCAAAACCGCCCGACTCCCGAAATCCTTCTGGGCCTGGGAC GAGATCATTGAAATGAACAAGACTGGCTACTGGCCGTCGACACCCAACACCAACCTGCTGTATGGGCTCAACGAAGCCTG CGACATGCTGCTGGAACACGGGCTGGATGTGGTGTTTGCGCGGCACCTGCGCTGGGCTGAAGGCGTGCGCGCCGCGGTCA GGGCCTGGGGCCTGCAAATCCAGTGCGCGGACCCGGCCGTGTACTCGCCCGTTCTCACCGGCGTGATGACCCCCGAAGGC ATAGACGCCGACGCCGTGCGCAAGATCATTTATGAACGCTTTGACTGCTCGCTGGGCACGGGCCTGGGCAAAGTCAAGGG CAGGATGTTCCGCATTGGCCACCTGGGCGACTGCAACGACCTGACCCTGATGGCGGCGCTGTCGGGCTGCGAAATGGGCC TCAAGCTCGCCGGCGTCAAGCTGGCGGGTTCGGGCGTACAGGCTGCGATGGACCATTTTTCAAGCCACGCGGCCGTGGTG CCGCTGCGCAAGGCCGCCTGA
Upstream 100 bases:
>100_bases CTGTCAAATCCATCGTTTACCCTTGGTTAGGTTGACAAATGAATTTTGTATGCAAAAAATACGGTCTTGCCTATTATCGC CATTTCAGGAACCACCCCGC
Downstream 100 bases:
>100_bases CGATATCTTTCCTCGCTTTCCGCTTTCCGCTTTCGACTTTCGACTTTTCACTTTCGACTTTTCACTTTCCCGTTTGCCGA GTTTCGCTACATCACAACTA
Product: class V aminotransferase
Products: NA
Alternate protein names: SGAT [H]
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MLTLDFHPTGRHFLQIPGPSPVPDRILRAMSLPTIDHRGPEFAALGLKVLADIRKIFQTRQPVIIYPASGTGAWEAALAN TLSPGDHVLMYETGHFAALWHKLAARLGLKTEVMSLSGPEAWRHGVRADMIEERLKADTQHAIRAVCVVHNETSTGVTSN IVAVRKAIDAAKHPALLLVDTISGLASADYRHDEWGVDVSISGSQKGLMLPPGISFNAVSAKALEASKTARLPKSFWAWD EIIEMNKTGYWPSTPNTNLLYGLNEACDMLLEHGLDVVFARHLRWAEGVRAAVRAWGLQIQCADPAVYSPVLTGVMTPEG IDADAVRKIIYERFDCSLGTGLGKVKGRMFRIGHLGDCNDLTLMAALSGCEMGLKLAGVKLAGSGVQAAMDHFSSHAAVV PLRKAA
Sequences:
>Translated_406_residues MLTLDFHPTGRHFLQIPGPSPVPDRILRAMSLPTIDHRGPEFAALGLKVLADIRKIFQTRQPVIIYPASGTGAWEAALAN TLSPGDHVLMYETGHFAALWHKLAARLGLKTEVMSLSGPEAWRHGVRADMIEERLKADTQHAIRAVCVVHNETSTGVTSN IVAVRKAIDAAKHPALLLVDTISGLASADYRHDEWGVDVSISGSQKGLMLPPGISFNAVSAKALEASKTARLPKSFWAWD EIIEMNKTGYWPSTPNTNLLYGLNEACDMLLEHGLDVVFARHLRWAEGVRAAVRAWGLQIQCADPAVYSPVLTGVMTPEG IDADAVRKIIYERFDCSLGTGLGKVKGRMFRIGHLGDCNDLTLMAALSGCEMGLKLAGVKLAGSGVQAAMDHFSSHAAVV PLRKAA >Mature_406_residues MLTLDFHPTGRHFLQIPGPSPVPDRILRAMSLPTIDHRGPEFAALGLKVLADIRKIFQTRQPVIIYPASGTGAWEAALAN TLSPGDHVLMYETGHFAALWHKLAARLGLKTEVMSLSGPEAWRHGVRADMIEERLKADTQHAIRAVCVVHNETSTGVTSN IVAVRKAIDAAKHPALLLVDTISGLASADYRHDEWGVDVSISGSQKGLMLPPGISFNAVSAKALEASKTARLPKSFWAWD EIIEMNKTGYWPSTPNTNLLYGLNEACDMLLEHGLDVVFARHLRWAEGVRAAVRAWGLQIQCADPAVYSPVLTGVMTPEG IDADAVRKIIYERFDCSLGTGLGKVKGRMFRIGHLGDCNDLTLMAALSGCEMGLKLAGVKLAGSGVQAAMDHFSSHAAVV PLRKAA
Specific function: Unknown
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=355, Percent_Identity=30.9859154929577, Blast_Score=141, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17536281, Length=352, Percent_Identity=29.2613636363636, Blast_Score=125, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6321079, Length=289, Percent_Identity=29.0657439446367, Blast_Score=120, Evalue=4e-28, Organism=Drosophila melanogaster, GI17530823, Length=348, Percent_Identity=27.8735632183908, Blast_Score=131, Evalue=7e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.6.1.45 [H]
Molecular weight: Translated: 43886; Mature: 43886
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLDFHPTGRHFLQIPGPSPVPDRILRAMSLPTIDHRGPEFAALGLKVLADIRKIFQTR CEEEECCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC QPVIIYPASGTGAWEAALANTLSPGDHVLMYETGHFAALWHKLAARLGLKTEVMSLSGPE CCEEEEECCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHHEEECCCCH AWRHGVRADMIEERLKADTQHAIRAVCVVHNETSTGVTSNIVAVRKAIDAAKHPALLLVD HHHHCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEE TISGLASADYRHDEWGVDVSISGSQKGLMLPPGISFNAVSAKALEASKTARLPKSFWAWD HHHHHHHCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH EIIEMNKTGYWPSTPNTNLLYGLNEACDMLLEHGLDVVFARHLRWAEGVRAAVRAWGLQI HHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEE QCADPAVYSPVLTGVMTPEGIDADAVRKIIYERFDCSLGTGLGKVKGRMFRIGHLGDCND EECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCEEEEECCCCCCCC LTLMAALSGCEMGLKLAGVKLAGSGVQAAMDHFSSHAAVVPLRKAA HHHHHHHHCCCCCEEEECEEEECCCHHHHHHHHCCCEEEEEECCCC >Mature Secondary Structure MLTLDFHPTGRHFLQIPGPSPVPDRILRAMSLPTIDHRGPEFAALGLKVLADIRKIFQTR CEEEECCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC QPVIIYPASGTGAWEAALANTLSPGDHVLMYETGHFAALWHKLAARLGLKTEVMSLSGPE CCEEEEECCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHHEEECCCCH AWRHGVRADMIEERLKADTQHAIRAVCVVHNETSTGVTSNIVAVRKAIDAAKHPALLLVD HHHHCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEE TISGLASADYRHDEWGVDVSISGSQKGLMLPPGISFNAVSAKALEASKTARLPKSFWAWD HHHHHHHCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH EIIEMNKTGYWPSTPNTNLLYGLNEACDMLLEHGLDVVFARHLRWAEGVRAAVRAWGLQI HHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEE QCADPAVYSPVLTGVMTPEGIDADAVRKIIYERFDCSLGTGLGKVKGRMFRIGHLGDCND EECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCEEEEECCCCCCCC LTLMAALSGCEMGLKLAGVKLAGSGVQAAMDHFSSHAAVVPLRKAA HHHHHHHHCCCCCEEEECEEEECCCHHHHHHHHCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8898880 [H]