| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yggT [C]
Identifier: 91788561
GI number: 91788561
Start: 2841362
End: 2841931
Strand: Reverse
Name: yggT [C]
Synonym: Bpro_2699
Alternate gene names: 91788561
Gene position: 2841931-2841362 (Counterclockwise)
Preceding gene: 91788562
Following gene: 91788557
Centisome position: 54.65
GC content: 63.51
Gene sequence:
>570_bases ATGCTGATCCGCATTCTGGACTTCCTGCTTGAGACATTTTTCTTCCTGCTGATCGCCGCTGCGCTCTTGCGCGCCTGGAT GAACTGGGTGAGGGTCAACATGAGCGCGCAGCCGGGCAGCTTTGTCATGGCGGTGACGGACTGGCTGGTCAAACCGCTGC GGCGTGCGCTGCCCAAGGCGCTGACCCGGTCCCGGGTGGACTGGGCGAGTGTGCTGGCCGCCGCCGTGTTGGCGCTGGGC TACGCCCTGTTGTGGGGGCTGCTGTTTGGTGTGGTGCTTGGCGCGACCTCCTGGGCCTCTGCGTTGGGGCCCGCGGCCTT TGTGAGCCTGCTGGCGTTTGCGTTGAAGATGCTGATCCGGGTGGCGTTGCAGACGCTGTTTATCCTGGTACTGGGCTATG CCATCATGTCCTGGATCCAGCCCGGCTCACCGGCTTATGGCTTGCTGGCCCGCCTTGCCGAGCCGCTGTTAACGCCGCTG CGGCGTGTGATTCCTACCGTCGGTGGGTTGGACCTGTCAGCACTGGTACTGCTGCTGGTACTGCAAATCGGCTTGATGGT GCTGGTCTAG
Upstream 100 bases:
>100_bases GGTGAAAAAATCGGCCGGCAGTGCCAGTCGGAAGCAGGGAAAAAAGCCTCGCCGCTGACGTTTTCGGCTTTTTTAATCCT CTTGGCTTGCCTGAAAATTT
Downstream 100 bases:
>100_bases CAGCGGGCGTTGCCCGCCAGCGTCGACGCAGTCAGCGTCACGCCCGGCTGGCGGGTGGCCCATGCGTCGGCCAGGTTTCC ATGGGCAAACACCGCGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF3 [H]
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MLIRILDFLLETFFFLLIAAALLRAWMNWVRVNMSAQPGSFVMAVTDWLVKPLRRALPKALTRSRVDWASVLAAAVLALG YALLWGLLFGVVLGATSWASALGPAAFVSLLAFALKMLIRVALQTLFILVLGYAIMSWIQPGSPAYGLLARLAEPLLTPL RRVIPTVGGLDLSALVLLLVLQIGLMVLV
Sequences:
>Translated_189_residues MLIRILDFLLETFFFLLIAAALLRAWMNWVRVNMSAQPGSFVMAVTDWLVKPLRRALPKALTRSRVDWASVLAAAVLALG YALLWGLLFGVVLGATSWASALGPAAFVSLLAFALKMLIRVALQTLFILVLGYAIMSWIQPGSPAYGLLARLAEPLLTPL RRVIPTVGGLDLSALVLLLVLQIGLMVLV >Mature_189_residues MLIRILDFLLETFFFLLIAAALLRAWMNWVRVNMSAQPGSFVMAVTDWLVKPLRRALPKALTRSRVDWASVLAAAVLALG YALLWGLLFGVVLGATSWASALGPAAFVSLLAFALKMLIRVALQTLFILVLGYAIMSWIQPGSPAYGLLARLAEPLLTPL RRVIPTVGGLDLSALVLLLVLQIGLMVLV
Specific function: Unknown
COG id: COG0762
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yggT family [H]
Homologues:
Organism=Escherichia coli, GI1789322, Length=180, Percent_Identity=35, Blast_Score=79, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003425 [H]
Pfam domain/function: PF02325 YGGT [H]
EC number: NA
Molecular weight: Translated: 20553; Mature: 20553
Theoretical pI: Translated: 11.67; Mature: 11.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIRILDFLLETFFFLLIAAALLRAWMNWVRVNMSAQPGSFVMAVTDWLVKPLRRALPKA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LTRSRVDWASVLAAAVLALGYALLWGLLFGVVLGATSWASALGPAAFVSLLAFALKMLIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH VALQTLFILVLGYAIMSWIQPGSPAYGLLARLAEPLLTPLRRVIPTVGGLDLSALVLLLV HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LQIGLMVLV HHHHHHHHC >Mature Secondary Structure MLIRILDFLLETFFFLLIAAALLRAWMNWVRVNMSAQPGSFVMAVTDWLVKPLRRALPKA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LTRSRVDWASVLAAAVLALGYALLWGLLFGVVLGATSWASALGPAAFVSLLAFALKMLIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH VALQTLFILVLGYAIMSWIQPGSPAYGLLARLAEPLLTPLRRVIPTVGGLDLSALVLLLV HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LQIGLMVLV HHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8982386 [H]