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The map label for this gene is skp [H]

Identifier: 91788548

GI number: 91788548

Start: 2826532

End: 2827038

Strand: Reverse

Name: skp [H]

Synonym: Bpro_2686

Alternate gene names: 91788548

Gene position: 2827038-2826532 (Counterclockwise)

Preceding gene: 91788549

Following gene: 91788547

Centisome position: 54.36

GC content: 55.82

Gene sequence:

>507_bases
ATGAAGCATTTTTCAACCAAAATTTTCCTGGGCTGCGTCATCGCATTGGCGGGTTTTTCCGCCAGTGCGCAGGAGTTCAA
GGTTGGGGTTGTCAACCTGGACAGGATTTTCCGTGAAGCCAATTCCGCCAAGGCCGCCCAGACCAAACTGGAGCAGGAAT
TCAGCAAGCGCGAGAAAGAACTGAACGACAGCGCCACGCAGCTGAAAACCCTGTCAGACAAATTTGAACGCGAGGCGCCC
ACGCTGGCCGAGAGCCAGCGCAACACCCGGCAAAAGCAGCTGGTCGACCAGGACCGGGATTTCCAGCGCAAGCGCCGCGA
GTTCCAGGAGGACCTGAATGCCCGCAAGAACGAAGAACTTCAGCAGGTGATCGAGCGCGCCAACAAGGTGGTCAAAACAC
TGGCTGAAACCGAAAAGTACGACCTGATCCTTCAGGAGTCGGTCTACGTCAATCCCAAGCATGACATCACCGACAAGGTG
ATCAAGGCGCTGAACGCCTCCCGTTAA

Upstream 100 bases:

>100_bases
CTCCGGTGGGCCCCCTGCGAATTGCCTATGCCATGCCAATACGCAAAATGGCAGGCGATAGAATAGAACGGTTGCAATTC
CAAATTGGTACATCTTTCTA

Downstream 100 bases:

>100_bases
TTGCGGGGTGTGTTCACCACCAGCATCGTTGTGAAAATGGCAGGCGCAGTGTGACGCTCCGTCTGGCCGATATTGTTCAG
TCCCTGGCCCCAACGGTGCA

Product: outer membrane chaperone Skp

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MKHFSTKIFLGCVIALAGFSASAQEFKVGVVNLDRIFREANSAKAAQTKLEQEFSKREKELNDSATQLKTLSDKFEREAP
TLAESQRNTRQKQLVDQDRDFQRKRREFQEDLNARKNEELQQVIERANKVVKTLAETEKYDLILQESVYVNPKHDITDKV
IKALNASR

Sequences:

>Translated_168_residues
MKHFSTKIFLGCVIALAGFSASAQEFKVGVVNLDRIFREANSAKAAQTKLEQEFSKREKELNDSATQLKTLSDKFEREAP
TLAESQRNTRQKQLVDQDRDFQRKRREFQEDLNARKNEELQQVIERANKVVKTLAETEKYDLILQESVYVNPKHDITDKV
IKALNASR
>Mature_168_residues
MKHFSTKIFLGCVIALAGFSASAQEFKVGVVNLDRIFREANSAKAAQTKLEQEFSKREKELNDSATQLKTLSDKFEREAP
TLAESQRNTRQKQLVDQDRDFQRKRREFQEDLNARKNEELQQVIERANKVVKTLAETEKYDLILQESVYVNPKHDITDKV
IKALNASR

Specific function: Molecular chaperone that interacts specifically with outer membrane proteins, thus maintaining the solubility of early folding intermediates during passage through the periplasm [H]

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the skp family [H]

Homologues:

None

Paralogues:

None

Copy number: 580 Molecules/Cell In: Growth-Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005632 [H]

Pfam domain/function: PF03938 OmpH [H]

EC number: NA

Molecular weight: Translated: 19417; Mature: 19417

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHFSTKIFLGCVIALAGFSASAQEFKVGVVNLDRIFREANSAKAAQTKLEQEFSKREKE
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNDSATQLKTLSDKFEREAPTLAESQRNTRQKQLVDQDRDFQRKRREFQEDLNARKNEEL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHH
QQVIERANKVVKTLAETEKYDLILQESVYVNPKHDITDKVIKALNASR
HHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKHFSTKIFLGCVIALAGFSASAQEFKVGVVNLDRIFREANSAKAAQTKLEQEFSKREKE
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNDSATQLKTLSDKFEREAPTLAESQRNTRQKQLVDQDRDFQRKRREFQEDLNARKNEEL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHH
QQVIERANKVVKTLAETEKYDLILQESVYVNPKHDITDKVIKALNASR
HHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12886019 [H]