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The map label for this gene is ysgA [H]

Identifier: 91788542

GI number: 91788542

Start: 2821628

End: 2822410

Strand: Reverse

Name: ysgA [H]

Synonym: Bpro_2680

Alternate gene names: 91788542

Gene position: 2822410-2821628 (Counterclockwise)

Preceding gene: 91788543

Following gene: 91788541

Centisome position: 54.27

GC content: 66.41

Gene sequence:

>783_bases
GTGAGCGTCAGTCCCGGCGCTGTCACGCACATCACGTCACGCGACAACACGCTCATCAAGGAATTGCGCAAGCTGTCGCA
GGACAGCACGGCTTACCGCAAGCAGGGCCGCGTCTGGCTGGAGGGCGATCATCTGTGCCGTGCCGCGCTCGCCCGCGGGA
AGAAACCGACCCTGGCGATTTTTTCAGAGTCTTTTTGGCCCTCGGCTCCCGTCGAATGGTCGCGCGCAGCTATTAAAAAC
ATAGTCATTCCAGATGCGTTGTTGCCCGAAATCAGCGGGCTGGAATCACCTGCGCGCATGGGCTTCGTGCTGGAACTGCC
GGCGGCCAGCGGGCTGGAGGCGGGCGCAGCCTCAGTGATCCTGGACCGGGTACAGGACGCCGGCAATGTCGGCTCCATCC
TGCGCAGCGCGGCGGCTTTCGGTTTTGGCCAGATCATCGCCCTCAAGGGCACGGCCGCCCTCTGGTCGCCCAAGGTGCTG
CGGGCCGGCATGGGTGCCCACTTTGCCTTGCAGTTGGTGGAAGGTGTGGAGCCTGCCGCCCTGGCGGCGCTGACAGTTCC
CATCGTGGTCACCAGTTCCCACCAGGGCAGCTTCCTGCACCAGCAGCCGCTGCCCCGGCCCTGTGCCTGGGCCATGGGCC
ACGAGGGGCAGGGCGTGAGCGACGACCTGATGGCCCGATCGGCCCTCAAGGTGCGCATAGACCAGCCCGGTGGGGAGGAG
TCGCTGAATGTGGCCGCCGCCGCCGCCATTTGCCTGTACGCGAGCGCCACGGCCCGCTGCTGA

Upstream 100 bases:

>100_bases
ACAAAGGGTATTCCACAGCTGAACATCTCGCCGCGCTGCGCGAGCATGGCGCCTGTCCCCAGCACCGCCGGTCTTTTGCG
CCGGTCGCCGAGGTCTTGCG

Downstream 100 bases:

>100_bases
GCGGGGCGCTGCAGGAAATTGACCCTCCTGCGGGGTCAGGGAGCTGCTGGCCGCAAGCAAAATTGGGGGTTACACCTAGC
GCCTCAGGCTATAATCAGTG

Product: tRNA/rRNA methyltransferase SpoU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSVSPGAVTHITSRDNTLIKELRKLSQDSTAYRKQGRVWLEGDHLCRAALARGKKPTLAIFSESFWPSAPVEWSRAAIKN
IVIPDALLPEISGLESPARMGFVLELPAASGLEAGAASVILDRVQDAGNVGSILRSAAAFGFGQIIALKGTAALWSPKVL
RAGMGAHFALQLVEGVEPAALAALTVPIVVTSSHQGSFLHQQPLPRPCAWAMGHEGQGVSDDLMARSALKVRIDQPGGEE
SLNVAAAAAICLYASATARC

Sequences:

>Translated_260_residues
MSVSPGAVTHITSRDNTLIKELRKLSQDSTAYRKQGRVWLEGDHLCRAALARGKKPTLAIFSESFWPSAPVEWSRAAIKN
IVIPDALLPEISGLESPARMGFVLELPAASGLEAGAASVILDRVQDAGNVGSILRSAAAFGFGQIIALKGTAALWSPKVL
RAGMGAHFALQLVEGVEPAALAALTVPIVVTSSHQGSFLHQQPLPRPCAWAMGHEGQGVSDDLMARSALKVRIDQPGGEE
SLNVAAAAAICLYASATARC
>Mature_259_residues
SVSPGAVTHITSRDNTLIKELRKLSQDSTAYRKQGRVWLEGDHLCRAALARGKKPTLAIFSESFWPSAPVEWSRAAIKNI
VIPDALLPEISGLESPARMGFVLELPAASGLEAGAASVILDRVQDAGNVGSILRSAAAFGFGQIIALKGTAALWSPKVLR
AGMGAHFALQLVEGVEPAALAALTVPIVVTSSHQGSFLHQQPLPRPCAWAMGHEGQGVSDDLMARSALKVRIDQPGGEES
LNVAAAAAICLYASATARC

Specific function: Unknown

COG id: COG0566

COG function: function code J; rRNA methylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Homo sapiens, GI8922534, Length=153, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001537
- InterPro:   IPR013123 [H]

Pfam domain/function: PF00588 SpoU_methylase; PF08032 SpoU_sub_bind [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 27293; Mature: 27161

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSPGAVTHITSRDNTLIKELRKLSQDSTAYRKQGRVWLEGDHLCRAALARGKKPTLAI
CCCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHCCCEEECCHHHHHHHHHCCCCCEEEE
FSESFWPSAPVEWSRAAIKNIVIPDALLPEISGLESPARMGFVLELPAASGLEAGAASVI
EECCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCHHHCCEEEECCCCCCCCCHHHHHH
LDRVQDAGNVGSILRSAAAFGFGQIIALKGTAALWSPKVLRAGMGAHFALQLVEGVEPAA
HHHHHCCCCHHHHHHHHHHHCCCEEEEEECCHHHCCHHHHHHCCCHHHHHHHHHCCCHHH
LAALTVPIVVTSSHQGSFLHQQPLPRPCAWAMGHEGQGVSDDLMARSALKVRIDQPGGEE
HHHEEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHEEEEEECCCCCCH
SLNVAAAAAICLYASATARC
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVSPGAVTHITSRDNTLIKELRKLSQDSTAYRKQGRVWLEGDHLCRAALARGKKPTLAI
CCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHCCCEEECCHHHHHHHHHCCCCCEEEE
FSESFWPSAPVEWSRAAIKNIVIPDALLPEISGLESPARMGFVLELPAASGLEAGAASVI
EECCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCHHHCCEEEECCCCCCCCCHHHHHH
LDRVQDAGNVGSILRSAAAFGFGQIIALKGTAALWSPKVLRAGMGAHFALQLVEGVEPAA
HHHHHCCCCHHHHHHHHHHHCCCEEEEEECCHHHCCHHHHHHCCCHHHHHHHHHCCCHHH
LAALTVPIVVTSSHQGSFLHQQPLPRPCAWAMGHEGQGVSDDLMARSALKVRIDQPGGEE
HHHEEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHEEEEEECCCCCCH
SLNVAAAAAICLYASATARC
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]