| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788532
Identifier: 91788532
GI number: 91788532
Start: 2806263
End: 2806856
Strand: Reverse
Name: 91788532
Synonym: Bpro_2670
Alternate gene names: NA
Gene position: 2806856-2806263 (Counterclockwise)
Preceding gene: 91788533
Following gene: 91788531
Centisome position: 53.98
GC content: 58.08
Gene sequence:
>594_bases ATGACAACGTTGGTGGTTGTGAAGAAGGCGGGCCAGATTGCCATTGCCGCTGACACGCTGGTCACGTTTGGCGATACCAG CCTGACCCACCGGTTTGAGGCCAACAGCAAGATATTCAAGGTGGATGCGCCCGTGGTGGGTACCAGCTACATCGGCATGG CCGGCACGGTGGCGCATTTTCCCGCGCTGCGCAAGGCGATGTCCGCGCTGGCCAAGGAAGATCTCAAGCTGGGGTCCCGC GACGAGGTGTTTGACACCTTCATCAAGCTGCACCCGCTGCTGAAAGACACGTTTTTCCTGCAGACCAAGGAAGACGACAA CGACCCCTACGAGTCCAGCCAGTTCACCGTGGTGATCGCCAATGCCAGCGGCATCTACGGCCTTTACAGCTACCGCGAAG TCTTTGAATTCAAGGAGTTTTGGGGCATTGGGTCAGGCCGCAGTTTTGCGCTGGGGGCCATGCACGCCTGCTGGGACAAG GCCAGAACCGCCCGCGAAGTAGCCCTGGCGGGCATGAATGCCGGCTGCGAGTTCGACAAGAACTCCGCTGGACCCATTGA AGTATTTACTCTCAAATTGAAAGCCTCCAAATGA
Upstream 100 bases:
>100_bases TGTCGCTGGCCTGGGACCACCGCGTGATCGACGGCGCCGGCGCCGCGCGCTTCAACGCCTATCTCGGACAAATCCTCGCC GACTTCCGCCGCGTTCTTTT
Downstream 100 bases:
>100_bases GCGCATCTTCGAGTCTCATCGATATCAAGGTACCGGACATTGGCGACTTTGACGAAGTGTCCGTGATTGAAGTGCTGGTC AAGGCCGGCGACACCATCAA
Product: 20S proteasome subunits A/B
Products: NA
Alternate protein names: ATP-Dependent Protease HslVU Peptidase Subunit; Hydrolase Proteasome Hslv Type Peptidase Domain; ATP-Dependent Protease Peptidase Subunit
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MTTLVVVKKAGQIAIAADTLVTFGDTSLTHRFEANSKIFKVDAPVVGTSYIGMAGTVAHFPALRKAMSALAKEDLKLGSR DEVFDTFIKLHPLLKDTFFLQTKEDDNDPYESSQFTVVIANASGIYGLYSYREVFEFKEFWGIGSGRSFALGAMHACWDK ARTAREVALAGMNAGCEFDKNSAGPIEVFTLKLKASK
Sequences:
>Translated_197_residues MTTLVVVKKAGQIAIAADTLVTFGDTSLTHRFEANSKIFKVDAPVVGTSYIGMAGTVAHFPALRKAMSALAKEDLKLGSR DEVFDTFIKLHPLLKDTFFLQTKEDDNDPYESSQFTVVIANASGIYGLYSYREVFEFKEFWGIGSGRSFALGAMHACWDK ARTAREVALAGMNAGCEFDKNSAGPIEVFTLKLKASK >Mature_196_residues TTLVVVKKAGQIAIAADTLVTFGDTSLTHRFEANSKIFKVDAPVVGTSYIGMAGTVAHFPALRKAMSALAKEDLKLGSRD EVFDTFIKLHPLLKDTFFLQTKEDDNDPYESSQFTVVIANASGIYGLYSYREVFEFKEFWGIGSGRSFALGAMHACWDKA RTAREVALAGMNAGCEFDKNSAGPIEVFTLKLKASK
Specific function: Unknown
COG id: COG5405
COG function: function code O; ATP-dependent protease HslVU (ClpYQ), peptidase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21537; Mature: 21406
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLVVVKKAGQIAIAADTLVTFGDTSLTHRFEANSKIFKVDAPVVGTSYIGMAGTVAHF CCEEEEEECCCCEEEEECEEEEECCCCEEEEECCCCEEEEECCCEECCCCCCCCHHHHHH PALRKAMSALAKEDLKLGSRDEVFDTFIKLHPLLKDTFFLQTKEDDNDPYESSQFTVVIA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCEEEEEEE NASGIYGLYSYREVFEFKEFWGIGSGRSFALGAMHACWDKARTAREVALAGMNAGCEFDK CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC NSAGPIEVFTLKLKASK CCCCCEEEEEEEEEECC >Mature Secondary Structure TTLVVVKKAGQIAIAADTLVTFGDTSLTHRFEANSKIFKVDAPVVGTSYIGMAGTVAHF CEEEEEECCCCEEEEECEEEEECCCCEEEEECCCCEEEEECCCEECCCCCCCCHHHHHH PALRKAMSALAKEDLKLGSRDEVFDTFIKLHPLLKDTFFLQTKEDDNDPYESSQFTVVIA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCEEEEEEE NASGIYGLYSYREVFEFKEFWGIGSGRSFALGAMHACWDKARTAREVALAGMNAGCEFDK CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC NSAGPIEVFTLKLKASK CCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA