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The map label for this gene is ydhO [H]

Identifier: 91788529

GI number: 91788529

Start: 2802548

End: 2803111

Strand: Direct

Name: ydhO [H]

Synonym: Bpro_2667

Alternate gene names: 91788529

Gene position: 2802548-2803111 (Clockwise)

Preceding gene: 91788527

Following gene: 91788535

Centisome position: 53.89

GC content: 62.77

Gene sequence:

>564_bases
ATGCGAATGTTTGCCCCTGCCCTCGTCATTGCCTCTGCCGCGTTGCTGGCGCTCAGTGCACACGCAGCGCCCGGCAACTC
TGCTGATGACATGGACAAGCTGCTGGCCGACAAGGGCCTGCTCACCCGAATTGACCAAGTTCGCCAGAACGTCCGCGACA
GGGCGTCCGAGCTGGTCGTCAATGCCATGGGCTTCCTGGGAGTGCCTTACAAACGGGGCGGCAACAACCTTGAGACCGGT
TTTGACTGCAGCGGTTTTGTGCGTGCCATTTATGAGCAAAGCGTGGGCCTGTTGCTGCCGCGCAAGGCTGAGCAGCAGGC
TGCGGCCACTCAAAGCATTGACAAAAACGACTTGCAGCCCGGCGATCTGGTGTTTTTCAACACCCTGAGGCGTGCCTTCA
GCCACGTGGGCATTTACGTCGGCGACGGCAAGTTCATCCACTCCCCCAAGCCGGGCGCTGAAGTCCGGGTGGAGAGCATG
GGCGTGGACTACTGGGCGCGCCGCTTTGACGGCGCCCGCCGCGTGCAAGGCAGCGCGCCGCCAGCCAACCCGGCTGGCGA
ATAG

Upstream 100 bases:

>100_bases
TTAAGTCGTTTTAAGTCGTTACAAATCAATGGGTTGTAATCGCAATCAAGAAACAACATGAGATTGACGCAGGACCAATC
CTTCAAGTAAGCTCCACGCC

Downstream 100 bases:

>100_bases
GTCCGCGCAGGCAGCATCTGCCTGTCCATTGATCAGTCGGCCTTGACGCCGGCATCCCTGATCACCTTCGCCCATTTGGC
CGTTTCGGCCGCAATAAACG

Product: peptidace C40 NLP/P60

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MRMFAPALVIASAALLALSAHAAPGNSADDMDKLLADKGLLTRIDQVRQNVRDRASELVVNAMGFLGVPYKRGGNNLETG
FDCSGFVRAIYEQSVGLLLPRKAEQQAAATQSIDKNDLQPGDLVFFNTLRRAFSHVGIYVGDGKFIHSPKPGAEVRVESM
GVDYWARRFDGARRVQGSAPPANPAGE

Sequences:

>Translated_187_residues
MRMFAPALVIASAALLALSAHAAPGNSADDMDKLLADKGLLTRIDQVRQNVRDRASELVVNAMGFLGVPYKRGGNNLETG
FDCSGFVRAIYEQSVGLLLPRKAEQQAAATQSIDKNDLQPGDLVFFNTLRRAFSHVGIYVGDGKFIHSPKPGAEVRVESM
GVDYWARRFDGARRVQGSAPPANPAGE
>Mature_187_residues
MRMFAPALVIASAALLALSAHAAPGNSADDMDKLLADKGLLTRIDQVRQNVRDRASELVVNAMGFLGVPYKRGGNNLETG
FDCSGFVRAIYEQSVGLLLPRKAEQQAAATQSIDKNDLQPGDLVFFNTLRRAFSHVGIYVGDGKFIHSPKPGAEVRVESM
GVDYWARRFDGARRVQGSAPPANPAGE

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=127, Percent_Identity=43.3070866141732, Blast_Score=112, Evalue=1e-26,
Organism=Escherichia coli, GI1786421, Length=156, Percent_Identity=33.974358974359, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1788501, Length=180, Percent_Identity=35.5555555555556, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1788001, Length=112, Percent_Identity=41.9642857142857, Blast_Score=80, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 20157; Mature: 20157

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMFAPALVIASAALLALSAHAAPGNSADDMDKLLADKGLLTRIDQVRQNVRDRASELVV
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
NAMGFLGVPYKRGGNNLETGFDCSGFVRAIYEQSVGLLLPRKAEQQAAATQSIDKNDLQP
HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCC
GDLVFFNTLRRAFSHVGIYVGDGKFIHSPKPGAEVRVESMGVDYWARRFDGARRVQGSAP
CHHHHHHHHHHHHHHCCEEECCCEEEECCCCCCEEEHHHHCHHHHHHHCCCHHHCCCCCC
PANPAGE
CCCCCCC
>Mature Secondary Structure
MRMFAPALVIASAALLALSAHAAPGNSADDMDKLLADKGLLTRIDQVRQNVRDRASELVV
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
NAMGFLGVPYKRGGNNLETGFDCSGFVRAIYEQSVGLLLPRKAEQQAAATQSIDKNDLQP
HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCC
GDLVFFNTLRRAFSHVGIYVGDGKFIHSPKPGAEVRVESMGVDYWARRFDGARRVQGSAP
CHHHHHHHHHHHHHHCCEEECCCEEEECCCCCCEEEHHHHCHHHHHHHCCCHHHCCCCCC
PANPAGE
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]