| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is dctS [H]
Identifier: 91788535
GI number: 91788535
Start: 2811571
End: 2814192
Strand: Direct
Name: dctS [H]
Synonym: Bpro_2673
Alternate gene names: 91788535
Gene position: 2811571-2814192 (Clockwise)
Preceding gene: 91788529
Following gene: 91788536
Centisome position: 54.07
GC content: 62.28
Gene sequence:
>2622_bases ATGACCATGCGGGTATCGCCGGGATACATCTCACTTAAACTGTTACCTTCCTCTATGTCCAAGCCCTCCTCCTTTTCCGA CTCCGTTGCAGCGAGTCCCGCACCCCTCGCTTTCTGGCACCGCTGGTGGGGCAAACAGTCGCCATCGCGGCAGGACCGTT TTATCACCTTGGGTCCGCTGCTGGCGGTGGTGCTGTTCCTGGCGGCTGTCATCGCGGCCTTCGCCTATCTGCGGATCGAG GAAATAGACCGCGAGCAGCAGGCCGTCAAACGCGATGTCGAATACGCCCAGCAAAGGTTGCGCCTGCGGCTGCTTGAGAG GCAGGAGCAGCTCATGCGCATTGGCCGGGATGTGTCCAACAAGGAGGTTGACGCCGAAGAGTTCATCGTCCAGGCCGAAT CGCTGGTCAACCAGTACCCCGAACTGATGACTGTGACGTGGATCGACAGCAAGCGGCGCGTCAAGGTTGCCTATGCATCG CCCAGCGTCCATCCCAGCCAGTCGCGCGTCGCAGGCGAGCAGCTCAAGGTCGGCGAGACAGACGGCACGTATGAACTGGC GCGAGACCTGCGCCAGCCGGTTTACTCACGCCCCCTGGCAGCCAACGAACATAGCGGCCACAACGCACCTACCCTGCAAT TGCAGGTGCCACTCGATGACCAGGGGAAATTTGACGGCGTCATCATGGGCGAATACTCCATCGATGGCTTGCTGCGCTTC GGCGTTCCCACCGAAGTGACCGCCAAATACGCGGTGACCCTGATCAATGACAAGAACCTCGTGCTGGCTGGCAACTTGCC ACCCAGGCGCAATCCGGCGGCCCGGCTGCTGCCGTGGTCTGACGCTGCTGCCGAGTACGAGATCCCGGTTTCACCTGTGG GCAACGGGCTGCTGATTCGCGCAGAAGGCTACCGTGCCTCGCTGGGCGTTGTGGGCAGCGGCTTCTTCTGGCTGGTCAGC GCCCTCAGCGCCCTGACCGTCTGGATGCTTCTGGGCACCTGGCGCCACACCCGCCGCCGCGTCCAGGCGCAGCAGGCGCT GATATCCGAAACCAACTTCCGCCGAGCGATGGAAAATTCCATGCTCACCGGCATGCGCGCGCTGGATTTGCAGGGCCGCA TTACCTACGTCAACCCCGCTTTCTGCGCAATGACGGGCTTTAGCGAAAGCGAGCTGGTGGGCCGTACCCCGCCCTTCCCG CACTGGCCTGAAGCCGAGATCGATATCCTGATGGCGCGGCTTGACGACGAGTTGCACGGCCGCACCCCTCCCGGTGGATT CGAAGTCCGTGTCAAACGCAAAAACGGCCAAATCTTTGATTCCCGCATGTATGTGTCGCCCCTGATTGACCCACGCGGGC AACAGACGGGCTGGATGACGTCGATGACGGACATCACCGAGCCCAAGCGCATTCGCGAAGAACTGTCAGCCTCGTATGAA CGCTTCACCACGGTGCTGGAGGGGCTGGATGCAGCGGTCTCCGTAGCGCCGCTGGGCAGCGAAGAACTGCTGTTTGCCAA CAAGCTGTACCGGTCCTGGTTCGGCGGCGAGGTGTCCGGGCACATGAACCTGATTGCGCAGGCCGGTGTGCCGGCTGCCA TGCCCACCGAAGACGCCATCGATCCGGTGGACGGCATGGCCGGATTTCCGACCGACACCCTGACCACCGCCCAGACGGAA AACGCCGAAATATTTGTGCCCGACCTGGGCAAGTGGCTGGAAGTGCGCTCGCGCTACCTCACTTGGGTAGACGGCCGCCT GGCGCAAATGGTGATCGCGACCGACATCACGCCACGGCGCCATGCCGAAGAACAGGCCGCGCAGCAAAACGAGCGCGCCC AGACCGCGAGCCGGCTCATCACCATGGGCGAAATGGCATCCAGCGTGGCCCACGAGCTCAACCAGCCGCTGACCGCCATC AACAACTATTGCAATGGCATGGTGTCGCGCATCAAGGGCCAGCAAATCAGCAATGAGGACCTGCTGATCGCGCTCGACAA GACCGCCCGGCAGGCGCACCGTGCCGGCCAGATCATCCAGCGCATCCGCTCCTTTGTGAAACGCAGCGAGCCCAACCGAA CCTCTGCCGATGTCGCCACCATGGTCAGCAACGCCATGGAGCTGGCCGACATCGAGTTGCGCCGCCACCATGTGCGGCTG AGCCACTACATCGCGGCCCGTTTGCCCAACATCATGGTGGACCCCATCCTGATCGAACAGGTGCTCATCAACCTGATGAA AAATGCGGCCGAGTCGATTGAGCAGGCGCACCTGCCCACGGCCCGCCGCAGCGTGGAATTGCGCGTCGTACCCAAGCACA TCGAGGACCAGAGTGTGGTGGAGTTTTCGGTCCTTGACTCGGGCCGGGGCCTGTCGCCGGAAGTCAAGGCACGGCTCTAT GAAGCCTTCTACTCCACCAAGGCTGAGGGCATGGGCATCGGCCTGAAACTGTGCCGCAGCATTGTCGAGTCCCACCAGGG CAGGATGGAGGCCGAGAACCTCTACAATGGGGACGAAGTGGTGGGGTGCCGGTTCACTTTCTGGATCCCCGTGACGCCCC TGCTTTCACCTGCACCTTCTGCTAGCGATACTGTAGCGGCCAAGGATGCCGGCGTTCACTAA
Upstream 100 bases:
>100_bases TTTATATTATGAAATTTCAACTTCACCGCCTTTCTCACGAAAGTCAATGCGGGCAGAGAACACCCCTGCGACCAGACACT GAAGCTCACCCCAAAAGATC
Downstream 100 bases:
>100_bases AGCACCTTCAGGAATAGTTTCGAGAAGTTCACAAAAGAAAGTTTGGCATGAGCTTGATTCCCAAAAAAGGCACTGTTTAC GTCATTGATGATGACGAGGG
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 873; Mature: 872
Protein sequence:
>873_residues MTMRVSPGYISLKLLPSSMSKPSSFSDSVAASPAPLAFWHRWWGKQSPSRQDRFITLGPLLAVVLFLAAVIAAFAYLRIE EIDREQQAVKRDVEYAQQRLRLRLLERQEQLMRIGRDVSNKEVDAEEFIVQAESLVNQYPELMTVTWIDSKRRVKVAYAS PSVHPSQSRVAGEQLKVGETDGTYELARDLRQPVYSRPLAANEHSGHNAPTLQLQVPLDDQGKFDGVIMGEYSIDGLLRF GVPTEVTAKYAVTLINDKNLVLAGNLPPRRNPAARLLPWSDAAAEYEIPVSPVGNGLLIRAEGYRASLGVVGSGFFWLVS ALSALTVWMLLGTWRHTRRRVQAQQALISETNFRRAMENSMLTGMRALDLQGRITYVNPAFCAMTGFSESELVGRTPPFP HWPEAEIDILMARLDDELHGRTPPGGFEVRVKRKNGQIFDSRMYVSPLIDPRGQQTGWMTSMTDITEPKRIREELSASYE RFTTVLEGLDAAVSVAPLGSEELLFANKLYRSWFGGEVSGHMNLIAQAGVPAAMPTEDAIDPVDGMAGFPTDTLTTAQTE NAEIFVPDLGKWLEVRSRYLTWVDGRLAQMVIATDITPRRHAEEQAAQQNERAQTASRLITMGEMASSVAHELNQPLTAI NNYCNGMVSRIKGQQISNEDLLIALDKTARQAHRAGQIIQRIRSFVKRSEPNRTSADVATMVSNAMELADIELRRHHVRL SHYIAARLPNIMVDPILIEQVLINLMKNAAESIEQAHLPTARRSVELRVVPKHIEDQSVVEFSVLDSGRGLSPEVKARLY EAFYSTKAEGMGIGLKLCRSIVESHQGRMEAENLYNGDEVVGCRFTFWIPVTPLLSPAPSASDTVAAKDAGVH
Sequences:
>Translated_873_residues MTMRVSPGYISLKLLPSSMSKPSSFSDSVAASPAPLAFWHRWWGKQSPSRQDRFITLGPLLAVVLFLAAVIAAFAYLRIE EIDREQQAVKRDVEYAQQRLRLRLLERQEQLMRIGRDVSNKEVDAEEFIVQAESLVNQYPELMTVTWIDSKRRVKVAYAS PSVHPSQSRVAGEQLKVGETDGTYELARDLRQPVYSRPLAANEHSGHNAPTLQLQVPLDDQGKFDGVIMGEYSIDGLLRF GVPTEVTAKYAVTLINDKNLVLAGNLPPRRNPAARLLPWSDAAAEYEIPVSPVGNGLLIRAEGYRASLGVVGSGFFWLVS ALSALTVWMLLGTWRHTRRRVQAQQALISETNFRRAMENSMLTGMRALDLQGRITYVNPAFCAMTGFSESELVGRTPPFP HWPEAEIDILMARLDDELHGRTPPGGFEVRVKRKNGQIFDSRMYVSPLIDPRGQQTGWMTSMTDITEPKRIREELSASYE RFTTVLEGLDAAVSVAPLGSEELLFANKLYRSWFGGEVSGHMNLIAQAGVPAAMPTEDAIDPVDGMAGFPTDTLTTAQTE NAEIFVPDLGKWLEVRSRYLTWVDGRLAQMVIATDITPRRHAEEQAAQQNERAQTASRLITMGEMASSVAHELNQPLTAI NNYCNGMVSRIKGQQISNEDLLIALDKTARQAHRAGQIIQRIRSFVKRSEPNRTSADVATMVSNAMELADIELRRHHVRL SHYIAARLPNIMVDPILIEQVLINLMKNAAESIEQAHLPTARRSVELRVVPKHIEDQSVVEFSVLDSGRGLSPEVKARLY EAFYSTKAEGMGIGLKLCRSIVESHQGRMEAENLYNGDEVVGCRFTFWIPVTPLLSPAPSASDTVAAKDAGVH >Mature_872_residues TMRVSPGYISLKLLPSSMSKPSSFSDSVAASPAPLAFWHRWWGKQSPSRQDRFITLGPLLAVVLFLAAVIAAFAYLRIEE IDREQQAVKRDVEYAQQRLRLRLLERQEQLMRIGRDVSNKEVDAEEFIVQAESLVNQYPELMTVTWIDSKRRVKVAYASP SVHPSQSRVAGEQLKVGETDGTYELARDLRQPVYSRPLAANEHSGHNAPTLQLQVPLDDQGKFDGVIMGEYSIDGLLRFG VPTEVTAKYAVTLINDKNLVLAGNLPPRRNPAARLLPWSDAAAEYEIPVSPVGNGLLIRAEGYRASLGVVGSGFFWLVSA LSALTVWMLLGTWRHTRRRVQAQQALISETNFRRAMENSMLTGMRALDLQGRITYVNPAFCAMTGFSESELVGRTPPFPH WPEAEIDILMARLDDELHGRTPPGGFEVRVKRKNGQIFDSRMYVSPLIDPRGQQTGWMTSMTDITEPKRIREELSASYER FTTVLEGLDAAVSVAPLGSEELLFANKLYRSWFGGEVSGHMNLIAQAGVPAAMPTEDAIDPVDGMAGFPTDTLTTAQTEN AEIFVPDLGKWLEVRSRYLTWVDGRLAQMVIATDITPRRHAEEQAAQQNERAQTASRLITMGEMASSVAHELNQPLTAIN NYCNGMVSRIKGQQISNEDLLIALDKTARQAHRAGQIIQRIRSFVKRSEPNRTSADVATMVSNAMELADIELRRHHVRLS HYIAARLPNIMVDPILIEQVLINLMKNAAESIEQAHLPTARRSVELRVVPKHIEDQSVVEFSVLDSGRGLSPEVKARLYE AFYSTKAEGMGIGLKLCRSIVESHQGRMEAENLYNGDEVVGCRFTFWIPVTPLLSPAPSASDTVAAKDAGVH
Specific function: Member of the two-component regulatory system dctS/dctR involved in the transport of C4-dicarboxylates. DctS functions as a membrane-associated protein kinase that phosphorylates dctR in response to environmental signals [H]
COG id: COG2202
COG function: function code T; FOG: PAS/PAC domain
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=254, Percent_Identity=26.3779527559055, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI1788549, Length=267, Percent_Identity=26.5917602996255, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI1788713, Length=259, Percent_Identity=25.0965250965251, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1790300, Length=283, Percent_Identity=23.6749116607774, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 97113; Mature: 96982
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMRVSPGYISLKLLPSSMSKPSSFSDSVAASPAPLAFWHRWWGKQSPSRQDRFITLGPL CCEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEHHHH LAVVLFLAAVIAAFAYLRIEEIDREQQAVKRDVEYAQQRLRLRLLERQEQLMRIGRDVSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KEVDAEEFIVQAESLVNQYPELMTVTWIDSKRRVKVAYASPSVHPSQSRVAGEQLKVGET CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHCCCCEECCCC DGTYELARDLRQPVYSRPLAANEHSGHNAPTLQLQVPLDDQGKFDGVIMGEYSIDGLLRF CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCEEC GVPTEVTAKYAVTLINDKNLVLAGNLPPRRNPAARLLPWSDAAAEYEIPVSPVGNGLLIR CCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCEEECCCCCCCCEECCCCCCCCEEEEE AEGYRASLGVVGSGFFWLVSALSALTVWMLLGTWRHTRRRVQAQQALISETNFRRAMENS ECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLTGMRALDLQGRITYVNPAFCAMTGFSESELVGRTPPFPHWPEAEIDILMARLDDELHG HHHCCCEEECCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHCC RTPPGGFEVRVKRKNGQIFDSRMYVSPLIDPRGQQTGWMTSMTDITEPKRIREELSASYE CCCCCCEEEEEECCCCCEEECEEEECCCCCCCCCCCCCEECHHHCCCHHHHHHHHHHHHH RFTTVLEGLDAAVSVAPLGSEELLFANKLYRSWFGGEVSGHMNLIAQAGVPAAMPTEDAI HHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCC DPVDGMAGFPTDTLTTAQTENAEIFVPDLGKWLEVRSRYLTWVDGRLAQMVIATDITPRR CCCCCCCCCCCCCCEECCCCCCEEECCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHH HAEEQAAQQNERAQTASRLITMGEMASSVAHELNQPLTAINNYCNGMVSRIKGQQISNED HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC LLIALDKTARQAHRAGQIIQRIRSFVKRSEPNRTSADVATMVSNAMELADIELRRHHVRL EEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SHYIAARLPNIMVDPILIEQVLINLMKNAAESIEQAHLPTARRSVELRVVPKHIEDQSVV HHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCEE EFSVLDSGRGLSPEVKARLYEAFYSTKAEGMGIGLKLCRSIVESHQGRMEAENLYNGDEV EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCE VGCRFTFWIPVTPLLSPAPSASDTVAAKDAGVH EEEEEEEEEECCCCCCCCCCCCCCEECCCCCCC >Mature Secondary Structure TMRVSPGYISLKLLPSSMSKPSSFSDSVAASPAPLAFWHRWWGKQSPSRQDRFITLGPL CEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEHHHH LAVVLFLAAVIAAFAYLRIEEIDREQQAVKRDVEYAQQRLRLRLLERQEQLMRIGRDVSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KEVDAEEFIVQAESLVNQYPELMTVTWIDSKRRVKVAYASPSVHPSQSRVAGEQLKVGET CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHCCCCEECCCC DGTYELARDLRQPVYSRPLAANEHSGHNAPTLQLQVPLDDQGKFDGVIMGEYSIDGLLRF CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCEEC GVPTEVTAKYAVTLINDKNLVLAGNLPPRRNPAARLLPWSDAAAEYEIPVSPVGNGLLIR CCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCEEECCCCCCCCEECCCCCCCCEEEEE AEGYRASLGVVGSGFFWLVSALSALTVWMLLGTWRHTRRRVQAQQALISETNFRRAMENS ECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLTGMRALDLQGRITYVNPAFCAMTGFSESELVGRTPPFPHWPEAEIDILMARLDDELHG HHHCCCEEECCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHCC RTPPGGFEVRVKRKNGQIFDSRMYVSPLIDPRGQQTGWMTSMTDITEPKRIREELSASYE CCCCCCEEEEEECCCCCEEECEEEECCCCCCCCCCCCCEECHHHCCCHHHHHHHHHHHHH RFTTVLEGLDAAVSVAPLGSEELLFANKLYRSWFGGEVSGHMNLIAQAGVPAAMPTEDAI HHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCC DPVDGMAGFPTDTLTTAQTENAEIFVPDLGKWLEVRSRYLTWVDGRLAQMVIATDITPRR CCCCCCCCCCCCCCEECCCCCCEEECCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHH HAEEQAAQQNERAQTASRLITMGEMASSVAHELNQPLTAINNYCNGMVSRIKGQQISNED HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC LLIALDKTARQAHRAGQIIQRIRSFVKRSEPNRTSADVATMVSNAMELADIELRRHHVRL EEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SHYIAARLPNIMVDPILIEQVLINLMKNAAESIEQAHLPTARRSVELRVVPKHIEDQSVV HHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCEE EFSVLDSGRGLSPEVKARLYEAFYSTKAEGMGIGLKLCRSIVESHQGRMEAENLYNGDEV EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCE VGCRFTFWIPVTPLLSPAPSASDTVAAKDAGVH EEEEEEEEEECCCCCCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8455557 [H]