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The map label for this gene is scpB [H]

Identifier: 91788476

GI number: 91788476

Start: 2745109

End: 2745843

Strand: Reverse

Name: scpB [H]

Synonym: Bpro_2614

Alternate gene names: 91788476

Gene position: 2745843-2745109 (Counterclockwise)

Preceding gene: 91788477

Following gene: 91788475

Centisome position: 52.8

GC content: 60.41

Gene sequence:

>735_bases
ATGAATACGACGGATGCGAAGCGCGTCCTCGAAACAGCACTCATCTGCGCGCAGCAACCGCTGCCTTTGCGTGAGATGGG
GGTGCTGTTTAACGGGGTATTAACCGCCGACAGCCTCAAGCTGGTACTTGAGGATTTGCAGAACGACTGGGCTGGACGGG
GGGTGGAGCTCGTTCATGTCGCCACCGGCTGGCGCTTTCAAAGCCGGCCACAGATGCGTGAGTACCTGGACAGGCTTCAT
CCGGAAAAGCCGCCCCGCTATACCCGGGCTACGCTTGAGACGCTTGCCATCATCGCGTACCGGCAGCCCGTGACGCGTGG
TGACATGGAAGACATTCGCGGCGTCACGATCAACAGCATGATCCTCAAGCAATTGGAGGATCGCGGCTGGGTTGAAGTGA
TTGGCCACCGGGAAACCGTGGGCCGGCCAGCGCTTTATGCGACGACCAGGCAGTTTCTCGATGATTTGGGCGTTGAGTCG
CTGGATCAGCTGCCCGCCATGGATAGTACGGCAGGGCAGGTTGCGATGCTCGAACAATTTGAGCTCGGCAGTGCAGAGCC
CGCTTTGTTGCCGGAGCCGCAAGATGCGCCCGCGCTCGAGATCGTGGACGACGAGGCGGCCGTGCTGGAACTGGATCCGG
ACATTCCGGAAGTCCTGGAAGCTTCTGCGGCGAATGCCGGTGAGTTTTCCCAATCTGAGCCCCGTGACCGGACCGACAGC
GAACCTTACGCATGA

Upstream 100 bases:

>100_bases
TTTCAGCTACCCGCAACATGGCGCCCCTGGCAAGGAGGTTGCGCATGGACGCAATGCGCGAACAAGCGCTTTTCCCCGCC
TTTTTTCGGAACGACCAATC

Downstream 100 bases:

>100_bases
ATGTAAAAGCATGAATCAACCAGACCACCCGGCTTCCGACCTCCCGCCCACTCAGCCGGGCGAAGATGAAAATAAACCTG
CTGCGACAGAAAAATCCGGG

Product: condensin subunit ScpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MNTTDAKRVLETALICAQQPLPLREMGVLFNGVLTADSLKLVLEDLQNDWAGRGVELVHVATGWRFQSRPQMREYLDRLH
PEKPPRYTRATLETLAIIAYRQPVTRGDMEDIRGVTINSMILKQLEDRGWVEVIGHRETVGRPALYATTRQFLDDLGVES
LDQLPAMDSTAGQVAMLEQFELGSAEPALLPEPQDAPALEIVDDEAAVLELDPDIPEVLEASAANAGEFSQSEPRDRTDS
EPYA

Sequences:

>Translated_244_residues
MNTTDAKRVLETALICAQQPLPLREMGVLFNGVLTADSLKLVLEDLQNDWAGRGVELVHVATGWRFQSRPQMREYLDRLH
PEKPPRYTRATLETLAIIAYRQPVTRGDMEDIRGVTINSMILKQLEDRGWVEVIGHRETVGRPALYATTRQFLDDLGVES
LDQLPAMDSTAGQVAMLEQFELGSAEPALLPEPQDAPALEIVDDEAAVLELDPDIPEVLEASAANAGEFSQSEPRDRTDS
EPYA
>Mature_244_residues
MNTTDAKRVLETALICAQQPLPLREMGVLFNGVLTADSLKLVLEDLQNDWAGRGVELVHVATGWRFQSRPQMREYLDRLH
PEKPPRYTRATLETLAIIAYRQPVTRGDMEDIRGVTINSMILKQLEDRGWVEVIGHRETVGRPALYATTRQFLDDLGVES
LDQLPAMDSTAGQVAMLEQFELGSAEPALLPEPQDAPALEIVDDEAAVLELDPDIPEVLEASAANAGEFSQSEPRDRTDS
EPYA

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 27120; Mature: 27120

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTDAKRVLETALICAQQPLPLREMGVLFNGVLTADSLKLVLEDLQNDWAGRGVELVHV
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
ATGWRFQSRPQMREYLDRLHPEKPPRYTRATLETLAIIAYRQPVTRGDMEDIRGVTINSM
ECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHH
ILKQLEDRGWVEVIGHRETVGRPALYATTRQFLDDLGVESLDQLPAMDSTAGQVAMLEQF
HHHHHHCCCCEEEECCHHHCCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHH
ELGSAEPALLPEPQDAPALEIVDDEAAVLELDPDIPEVLEASAANAGEFSQSEPRDRTDS
CCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCC
EPYA
CCCC
>Mature Secondary Structure
MNTTDAKRVLETALICAQQPLPLREMGVLFNGVLTADSLKLVLEDLQNDWAGRGVELVHV
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
ATGWRFQSRPQMREYLDRLHPEKPPRYTRATLETLAIIAYRQPVTRGDMEDIRGVTINSM
ECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHH
ILKQLEDRGWVEVIGHRETVGRPALYATTRQFLDDLGVESLDQLPAMDSTAGQVAMLEQF
HHHHHHCCCCEEEECCHHHCCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHH
ELGSAEPALLPEPQDAPALEIVDDEAAVLELDPDIPEVLEASAANAGEFSQSEPRDRTDS
CCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCC
EPYA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]