Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yfgM [C]

Identifier: 91788468

GI number: 91788468

Start: 2736436

End: 2737131

Strand: Reverse

Name: yfgM [C]

Synonym: Bpro_2606

Alternate gene names: 91788468

Gene position: 2737131-2736436 (Counterclockwise)

Preceding gene: 91788469

Following gene: 91788467

Centisome position: 52.63

GC content: 58.62

Gene sequence:

>696_bases
ATGGCAAAACATCTCGATTTGGAAGAGCAGGAACAACTTGATGAACTCAAGCATTTCTGGAAGCAGTATGGCGACCTGAT
CACCTGGGGCCTGATCGCCGTGTTTGGCATTTTTGCGGCCTGGAACGGTTATCAGTACTGGCAGCGCAGCCAGGCGGCGC
AGGCTTCCGTGATGTACGACGAAATCGAGCGCGCTGTTCAGTCGGGTGATCAGGCCAGGATTGACCGTTCGTTGGCGGAC
ATGAAAGACCGTTTTGGCCGCACCACCTATGCCCAGCAAGCCGGTCTGCTCGCCGCCAGGGCCTATTACGACAAGGGCAA
CCTGGACGCTTCCCGCGCCGCCTTGACCGGGGTGGCCGAGAAGGCTTCTGACGAGGGTTATCAGGCCATTGCCCGGTTGC
GACTAGCCGGTCTTTTGCTGGAAAAGAAAGCCTACGACGAAGCCCTGCAGCAGCTGTCCGCTTCTTTCCCGAAAGATTTT
GCGGCTCTGGCAGCCGACCGCCGCGGCGATATCCTGGCCGCCCAGGGCAAGAAAACCGAAGCCCGGGTGGAATATGAAAA
AGCCTACAAGGGGCTCGACGAGCGTGCCGAGTACCGGCGCCTGGTGGAGGTCAAACTCAATGCGCTTGGCGTTGATCCCA
CCGCAGGTTCCACCAAACTGACAACGACCGCAGCCAATACCGAGGTGAAGAAATGA

Upstream 100 bases:

>100_bases
CGCCTGGGCTCACGCCTTGCGCGCCTAGCCTTGCATTTCGCCCCCCTACAATCACCCCACCTCAATCCGCGCCGTTATCG
GGCAGAACAAGCAGACTTTT

Downstream 100 bases:

>100_bases
TGATGCAGTCTTTTAGGCCCCTGGCCCAGATTTCTCGGCTGCCCTTGGCCATTTGTTTTGTAGCTCTGCTGGCTGGCTGC
TTTGGCGGCGCCACCAAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MAKHLDLEEQEQLDELKHFWKQYGDLITWGLIAVFGIFAAWNGYQYWQRSQAAQASVMYDEIERAVQSGDQARIDRSLAD
MKDRFGRTTYAQQAGLLAARAYYDKGNLDASRAALTGVAEKASDEGYQAIARLRLAGLLLEKKAYDEALQQLSASFPKDF
AALAADRRGDILAAQGKKTEARVEYEKAYKGLDERAEYRRLVEVKLNALGVDPTAGSTKLTTTAANTEVKK

Sequences:

>Translated_231_residues
MAKHLDLEEQEQLDELKHFWKQYGDLITWGLIAVFGIFAAWNGYQYWQRSQAAQASVMYDEIERAVQSGDQARIDRSLAD
MKDRFGRTTYAQQAGLLAARAYYDKGNLDASRAALTGVAEKASDEGYQAIARLRLAGLLLEKKAYDEALQQLSASFPKDF
AALAADRRGDILAAQGKKTEARVEYEKAYKGLDERAEYRRLVEVKLNALGVDPTAGSTKLTTTAANTEVKK
>Mature_230_residues
AKHLDLEEQEQLDELKHFWKQYGDLITWGLIAVFGIFAAWNGYQYWQRSQAAQASVMYDEIERAVQSGDQARIDRSLADM
KDRFGRTTYAQQAGLLAARAYYDKGNLDASRAALTGVAEKASDEGYQAIARLRLAGLLLEKKAYDEALQQLSASFPKDFA
ALAADRRGDILAAQGKKTEARVEYEKAYKGLDERAEYRRLVEVKLNALGVDPTAGSTKLTTTAANTEVKK

Specific function: Unknown

COG id: COG2976

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Escherichia coli, GI1788860, Length=206, Percent_Identity=28.6407766990291, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018704
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF09976 DUF2133 [H]

EC number: NA

Molecular weight: Translated: 25768; Mature: 25637

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKHLDLEEQEQLDELKHFWKQYGDLITWGLIAVFGIFAAWNGYQYWQRSQAAQASVMYD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
EIERAVQSGDQARIDRSLADMKDRFGRTTYAQQAGLLAARAYYDKGNLDASRAALTGVAE
HHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
KASDEGYQAIARLRLAGLLLEKKAYDEALQQLSASFPKDFAALAADRRGDILAAQGKKTE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCCCCH
ARVEYEKAYKGLDERAEYRRLVEVKLNALGVDPTAGSTKLTTTAANTEVKK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
AKHLDLEEQEQLDELKHFWKQYGDLITWGLIAVFGIFAAWNGYQYWQRSQAAQASVMYD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
EIERAVQSGDQARIDRSLADMKDRFGRTTYAQQAGLLAARAYYDKGNLDASRAALTGVAE
HHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
KASDEGYQAIARLRLAGLLLEKKAYDEALQQLSASFPKDFAALAADRRGDILAAQGKKTE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCCCCH
ARVEYEKAYKGLDERAEYRRLVEVKLNALGVDPTAGSTKLTTTAANTEVKK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10655208 [H]