Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yfgL [H]

Identifier: 91788467

GI number: 91788467

Start: 2735294

End: 2736439

Strand: Reverse

Name: yfgL [H]

Synonym: Bpro_2605

Alternate gene names: 91788467

Gene position: 2736439-2735294 (Counterclockwise)

Preceding gene: 91788468

Following gene: 91788466

Centisome position: 52.62

GC content: 64.57

Gene sequence:

>1146_bases
ATGATGATGCAGTCTTTTAGGCCCCTGGCCCAGATTTCTCGGCTGCCCTTGGCCATTTGTTTTGTAGCTCTGCTGGCTGG
CTGCTTTGGCGGCGCCACCAAGCCCCAGCCGGCCGAACTGCAGCCGGTGACGGCCCTGGTATCCGCTCGCCAGAGCTGGA
ACACCCGCATTGGGCAGGTCGATTTCCCTCTGGACGTGGCTGTTTCGGGCACCAGCGTTGCCATTGCGAGCGGCGACGGT
ACGATCGCCCTTTTGGATGCTGCGACAGGCCGGGAGTTCTGGCGCGCGAGTCTCAATACGCCGGTTGCAGCAGGTGTGGG
CAGCGACGGCAAGGTTTTGGCCGTGGTCACGAAGGCCAACGAGGTCGTTGCCCTGCAGGATGGGCGGGAAATCTGGCGCC
AGAAACTCAATGCGCAAGCCTTCACCGCCCCTTTTGTAGCCGGTGCGCGGGTGTTCGTCCTGGCAGCGGACCGGTCGGTC
ACTGCTTTTGATGGCCAGACGGGGCGCAAGCTGTGGGCGCAGCAACGACCCACCGAACCCCTGGTGCTGCGCCAGTCTGG
CGTGATGCTGGCGGTTGGCGATACGCTGGTGGTGGGCCTCGCTGGCCGCCTTGCGGGCCTGAACCCCGCCAACGGCAGCA
TTCGATGGGAGGCGCCCATTGCTTCGCCGCGCGGCATCAATGATGTGGAACGCCTGGTTGACCTGGTAGGGCGTGTCAGC
CGGGACGGCGACAATGTCTGTGCGCGGGCCTTCCAGGCCAGCATTGGCTGCGTCAATGCCGCGCGCGGCAGCCTGTTGTG
GGCCAAGCCGGCCAATGGCATGCAGGGTATTCATGGCGATGACCGCATGCTGTTTGGCACGGAAGCCGACGGGACGGTGA
TCGCTTGGCGGCGCACCGATGGCGAGCGAAGCTGGACCACAGACCGCCTGCGTTATCGCAGCCTGACGGCACCCCTGATC
GTGGGGCGTTCCGTGGCGATTGGCGACTTCAGCGGTTTTATCCATTTGCTGTCGCGGGAAGACGGCTCTCTCCTTAATCG
CCTGCCGACCGACGGCTCGGCCATTGCCGCGGCTCCCGTGCTCGCCGGCAACACGCTGATCGCCGTGACCCACAACGGTG
GGGTTTACGGTTTCAAGCCTGAGTAA

Upstream 100 bases:

>100_bases
ACCGGCGCCTGGTGGAGGTCAAACTCAATGCGCTTGGCGTTGATCCCACCGCAGGTTCCACCAAACTGACAACGACCGCA
GCCAATACCGAGGTGAAGAA

Downstream 100 bases:

>100_bases
ACGAAATACACGAAATACAACCTTTCCAGAAGCTGATCGATGAAACCTGTCATTGCGTTAGTCGGCCGCCCGAATGTGGG
CAAGTCGACGATTTTCAACC

Product: Pyrrolo-quinoline quinone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MMMQSFRPLAQISRLPLAICFVALLAGCFGGATKPQPAELQPVTALVSARQSWNTRIGQVDFPLDVAVSGTSVAIASGDG
TIALLDAATGREFWRASLNTPVAAGVGSDGKVLAVVTKANEVVALQDGREIWRQKLNAQAFTAPFVAGARVFVLAADRSV
TAFDGQTGRKLWAQQRPTEPLVLRQSGVMLAVGDTLVVGLAGRLAGLNPANGSIRWEAPIASPRGINDVERLVDLVGRVS
RDGDNVCARAFQASIGCVNAARGSLLWAKPANGMQGIHGDDRMLFGTEADGTVIAWRRTDGERSWTTDRLRYRSLTAPLI
VGRSVAIGDFSGFIHLLSREDGSLLNRLPTDGSAIAAAPVLAGNTLIAVTHNGGVYGFKPE

Sequences:

>Translated_381_residues
MMMQSFRPLAQISRLPLAICFVALLAGCFGGATKPQPAELQPVTALVSARQSWNTRIGQVDFPLDVAVSGTSVAIASGDG
TIALLDAATGREFWRASLNTPVAAGVGSDGKVLAVVTKANEVVALQDGREIWRQKLNAQAFTAPFVAGARVFVLAADRSV
TAFDGQTGRKLWAQQRPTEPLVLRQSGVMLAVGDTLVVGLAGRLAGLNPANGSIRWEAPIASPRGINDVERLVDLVGRVS
RDGDNVCARAFQASIGCVNAARGSLLWAKPANGMQGIHGDDRMLFGTEADGTVIAWRRTDGERSWTTDRLRYRSLTAPLI
VGRSVAIGDFSGFIHLLSREDGSLLNRLPTDGSAIAAAPVLAGNTLIAVTHNGGVYGFKPE
>Mature_381_residues
MMMQSFRPLAQISRLPLAICFVALLAGCFGGATKPQPAELQPVTALVSARQSWNTRIGQVDFPLDVAVSGTSVAIASGDG
TIALLDAATGREFWRASLNTPVAAGVGSDGKVLAVVTKANEVVALQDGREIWRQKLNAQAFTAPFVAGARVFVLAADRSV
TAFDGQTGRKLWAQQRPTEPLVLRQSGVMLAVGDTLVVGLAGRLAGLNPANGSIRWEAPIASPRGINDVERLVDLVGRVS
RDGDNVCARAFQASIGCVNAARGSLLWAKPANGMQGIHGDDRMLFGTEADGTVIAWRRTDGERSWTTDRLRYRSLTAPLI
VGRSVAIGDFSGFIHLLSREDGSLLNRLPTDGSAIAAAPVLAGNTLIAVTHNGGVYGFKPE

Specific function: May play a role in a homeostatic control mechanism that coordinates the overall outer membrane assembly process [H]

COG id: COG1520

COG function: function code S; FOG: WD40-like repeat

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To R.prowazekii RP232 [H]

Homologues:

Organism=Escherichia coli, GI1788859, Length=375, Percent_Identity=23.7333333333333, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017687
- InterPro:   IPR018391
- InterPro:   IPR002372
- InterPro:   IPR011047 [H]

Pfam domain/function: PF01011 PQQ [H]

EC number: NA

Molecular weight: Translated: 40191; Mature: 40191

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMQSFRPLAQISRLPLAICFVALLAGCFGGATKPQPAELQPVTALVSARQSWNTRIGQV
CCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEE
DFPLDVAVSGTSVAIASGDGTIALLDAATGREFWRASLNTPVAAGVGSDGKVLAVVTKAN
CCCEEEEECCCEEEEECCCCCEEEEECCCCHHHHHHHCCCCEEECCCCCCCEEEEEECCC
EVVALQDGREIWRQKLNAQAFTAPFVAGARVFVLAADRSVTAFDGQTGRKLWAQQRPTEP
EEEEECCCHHHHHHHCCCCCCCCHHHCCCEEEEEEECCEEEEECCCCCHHHHHHCCCCCC
LVLRQSGVMLAVGDTLVVGLAGRLAGLNPANGSIRWEAPIASPRGINDVERLVDLVGRVS
EEEECCCEEEEECCEEEEEHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHC
RDGDNVCARAFQASIGCVNAARGSLLWAKPANGMQGIHGDDRMLFGTEADGTVIAWRRTD
CCCHHHHHHHHHHHCCEEECCCCCEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECC
GERSWTTDRLRYRSLTAPLIVGRSVAIGDFSGFIHLLSREDGSLLNRLPTDGSAIAAAPV
CCCCCCHHHHHHHCCCCCEEECCEEEEECHHHHHEEEECCCCHHHHHCCCCCCCEEECCE
LAGNTLIAVTHNGGVYGFKPE
EECCEEEEEEECCCEEECCCC
>Mature Secondary Structure
MMMQSFRPLAQISRLPLAICFVALLAGCFGGATKPQPAELQPVTALVSARQSWNTRIGQV
CCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEE
DFPLDVAVSGTSVAIASGDGTIALLDAATGREFWRASLNTPVAAGVGSDGKVLAVVTKAN
CCCEEEEECCCEEEEECCCCCEEEEECCCCHHHHHHHCCCCEEECCCCCCCEEEEEECCC
EVVALQDGREIWRQKLNAQAFTAPFVAGARVFVLAADRSVTAFDGQTGRKLWAQQRPTEP
EEEEECCCHHHHHHHCCCCCCCCHHHCCCEEEEEEECCEEEEECCCCCHHHHHHCCCCCC
LVLRQSGVMLAVGDTLVVGLAGRLAGLNPANGSIRWEAPIASPRGINDVERLVDLVGRVS
EEEECCCEEEEECCEEEEEHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHC
RDGDNVCARAFQASIGCVNAARGSLLWAKPANGMQGIHGDDRMLFGTEADGTVIAWRRTD
CCCHHHHHHHHHHHCCEEECCCCCEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECC
GERSWTTDRLRYRSLTAPLIVGRSVAIGDFSGFIHLLSREDGSLLNRLPTDGSAIAAAPV
CCCCCCHHHHHHHCCCCCEEECCEEEEECHHHHHEEEECCCCHHHHHCCCCCCCEEECCE
LAGNTLIAVTHNGGVYGFKPE
EECCEEEEEEECCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]