| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is hisZ [H]
Identifier: 91788460
GI number: 91788460
Start: 2728513
End: 2729691
Strand: Reverse
Name: hisZ [H]
Synonym: Bpro_2598
Alternate gene names: 91788460
Gene position: 2729691-2728513 (Counterclockwise)
Preceding gene: 91788461
Following gene: 91788459
Centisome position: 52.49
GC content: 63.19
Gene sequence:
>1179_bases ATGTCCGCCTGGTTGTCATCATGGCAATTGCCCGATCAAATTGCCGATGTCCTGCCCTCCGAGGCGCGCCACATCGAAGA GCTGCGCCGGCTGTTTCTCGACACCGCTCGCAGCTATGGCTATGAGTTGGTCATGCCGCCGCTGCTGGAGCATCTCGAGT CGCTGCTCACCGGCACCGGCGAGGCACTGGATCTGCAGACTTTCAAGCTCGTTGACCAGCTCTCGGGCCGTACGCTGGGT TTGCGGGCTGACACCACGCCGCAGGTCGCCCGCATTGATGCGCACCTGCTCAATCGCAGTGGCGTAGCCCGTCTGTGTTA TTGCGGCCCGGTGCTGCATACCCGTGCCGACCGCCCTCATGCCACCCGGGAGCCTTTGCAGTTCGGGGCTGAAATATATG GCCATGCCGGGCTGGAAGCCGACCTGGAGGCGCAGTCGCTGGCGCTGGAGGGCCTCAAGGCGGCGGGTGTGACCGCGTTG AGTGTTGACATGGCCGATGCCCGCATTGTCAACAGCTTGCTGGCTGGCGCCGCCGTGAATGCCAAAACCCTGGCGCTTAT CCATGCTGCGCTCGCGGCCAAGGATGCCAGCGAACTCGACAGCCTGACGGCCAGCTTGAAGGGCAGCCTTTCCGCTGCGG CATGTGACGGTCTGAAAGCATTGTTGCAGCTTTACGGCGATGAAAAAGTCCTGCTGGAGGCTGAAAAAGTCCTCTCATCC TGGCCCGATGCACAGAACGCGCTGCAAAATTTGAAGTGGCTGGCCGCGCACGTGGGTGATGTCAAGGTCAGCTTTGACTT GGCCGATTTGCGAGGCTACGCCTATTACAGCGGTACCCGTTTTGCCATCTATGGGCAGGGCGCCGAGTTGGCGCGTGGCG GCCGTTATGACGAGGTCGGTGCGGTGTTTGGTCGCAACCGTCCGGCCGTCGGCTTCAGTCTGGATCTCAAGGAACTGGTC AGCGTGCTGCCGCCCCGGCCGCTCAGGGCCGCCATTCGTGCGCCATGGGGGGAAGATGCCGGCCTGCGCGCTGCCATCGC CCGCCTTCGGGCCGGCGGCGAGACGGTGGCCTGTGTGCTTCCGGGCCATGAACATGAGGTCAATGAATTTGACTGCGACC GCGAACTGGCCCATGCGGCCGGCCAATGGGTGGTCCAGCCCTTGAAAAAGGCGGCCTGA
Upstream 100 bases:
>100_bases GTGCTTATTTGCACCCGGCAACCCCCTCTTGCCGCCCTTGGCCCAAAAGCGGCCTCCAAGCCCGGTAAAATCTGGTTTTT AACAGCCCACGAAAATTACA
Downstream 100 bases:
>100_bases AGCCGGGCCTCAGGCCGGCCTTCAATGCTGTTTTTCCCAACGAATCCTTAACGAGAAATTGAAGATGACATATAAACCAA CCGTAGCCGCGGGCCGCAAT
Product: class II tRNA synthetase
Products: AMP; diphosphate +L-histidyl-tRNAHis [C]
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MSAWLSSWQLPDQIADVLPSEARHIEELRRLFLDTARSYGYELVMPPLLEHLESLLTGTGEALDLQTFKLVDQLSGRTLG LRADTTPQVARIDAHLLNRSGVARLCYCGPVLHTRADRPHATREPLQFGAEIYGHAGLEADLEAQSLALEGLKAAGVTAL SVDMADARIVNSLLAGAAVNAKTLALIHAALAAKDASELDSLTASLKGSLSAAACDGLKALLQLYGDEKVLLEAEKVLSS WPDAQNALQNLKWLAAHVGDVKVSFDLADLRGYAYYSGTRFAIYGQGAELARGGRYDEVGAVFGRNRPAVGFSLDLKELV SVLPPRPLRAAIRAPWGEDAGLRAAIARLRAGGETVACVLPGHEHEVNEFDCDRELAHAAGQWVVQPLKKAA
Sequences:
>Translated_392_residues MSAWLSSWQLPDQIADVLPSEARHIEELRRLFLDTARSYGYELVMPPLLEHLESLLTGTGEALDLQTFKLVDQLSGRTLG LRADTTPQVARIDAHLLNRSGVARLCYCGPVLHTRADRPHATREPLQFGAEIYGHAGLEADLEAQSLALEGLKAAGVTAL SVDMADARIVNSLLAGAAVNAKTLALIHAALAAKDASELDSLTASLKGSLSAAACDGLKALLQLYGDEKVLLEAEKVLSS WPDAQNALQNLKWLAAHVGDVKVSFDLADLRGYAYYSGTRFAIYGQGAELARGGRYDEVGAVFGRNRPAVGFSLDLKELV SVLPPRPLRAAIRAPWGEDAGLRAAIARLRAGGETVACVLPGHEHEVNEFDCDRELAHAAGQWVVQPLKKAA >Mature_391_residues SAWLSSWQLPDQIADVLPSEARHIEELRRLFLDTARSYGYELVMPPLLEHLESLLTGTGEALDLQTFKLVDQLSGRTLGL RADTTPQVARIDAHLLNRSGVARLCYCGPVLHTRADRPHATREPLQFGAEIYGHAGLEADLEAQSLALEGLKAAGVTALS VDMADARIVNSLLAGAAVNAKTLALIHAALAAKDASELDSLTASLKGSLSAAACDGLKALLQLYGDEKVLLEAEKVLSSW PDAQNALQNLKWLAAHVGDVKVSFDLADLRGYAYYSGTRFAIYGQGAELARGGRYDEVGAVFGRNRPAVGFSLDLKELVS VLPPRPLRAAIRAPWGEDAGLRAAIARLRAGGETVACVLPGHEHEVNEFDCDRELAHAAGQWVVQPLKKAA
Specific function: Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine [H]
COG id: COG3705
COG function: function code E; ATP phosphoribosyltransferase involved in histidine biosynthesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. HisZ subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004517 - InterPro: IPR004516 [H]
Pfam domain/function: NA
EC number: 6.1.1.21 [C]
Molecular weight: Translated: 42061; Mature: 41930
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAWLSSWQLPDQIADVLPSEARHIEELRRLFLDTARSYGYELVMPPLLEHLESLLTGTG CCCCHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHCCCC EALDLQTFKLVDQLSGRTLGLRADTTPQVARIDAHLLNRSGVARLCYCGPVLHTRADRPH CCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHCHHHHCCCCCCC ATREPLQFGAEIYGHAGLEADLEAQSLALEGLKAAGVTALSVDMADARIVNSLLAGAAVN CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCC AKTLALIHAALAAKDASELDSLTASLKGSLSAAACDGLKALLQLYGDEKVLLEAEKVLSS HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC WPDAQNALQNLKWLAAHVGDVKVSFDLADLRGYAYYSGTRFAIYGQGAELARGGRYDEVG CCCHHHHHHHHHHHHHHHCCEEEEEEHHHHCCEEEECCCEEEEEECCHHHHCCCCCHHHH AVFGRNRPAVGFSLDLKELVSVLPPRPLRAAIRAPWGEDAGLRAAIARLRAGGETVACVL HHHCCCCCCCEEECCHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEE PGHEHEVNEFDCDRELAHAAGQWVVQPLKKAA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAWLSSWQLPDQIADVLPSEARHIEELRRLFLDTARSYGYELVMPPLLEHLESLLTGTG CCCHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHCCCC EALDLQTFKLVDQLSGRTLGLRADTTPQVARIDAHLLNRSGVARLCYCGPVLHTRADRPH CCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHCHHHHCCCCCCC ATREPLQFGAEIYGHAGLEADLEAQSLALEGLKAAGVTALSVDMADARIVNSLLAGAAVN CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCC AKTLALIHAALAAKDASELDSLTASLKGSLSAAACDGLKALLQLYGDEKVLLEAEKVLSS HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC WPDAQNALQNLKWLAAHVGDVKVSFDLADLRGYAYYSGTRFAIYGQGAELARGGRYDEVG CCCHHHHHHHHHHHHHHHCCEEEEEEHHHHCCEEEECCCEEEEEECCHHHHCCCCCHHHH AVFGRNRPAVGFSLDLKELVSVLPPRPLRAAIRAPWGEDAGLRAAIARLRAGGETVACVL HHHCCCCCCCEEECCHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEE PGHEHEVNEFDCDRELAHAAGQWVVQPLKKAA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Mg2+ [C]
Kcat value (1/min): 8520 [C]
Specific activity: 121.8
Km value (mM): 0.06 {His}} 0.046 {His}} 0.03 {His}} 0.02 {His}} 0.017 {His}} 0.011 {His}} 0.008 {His}} 0.0014 {tRNAHis}} 0.00056 {tRNAHis}} 0.0016 {U73tRNAHisGUG}} 0.00031 {U73tRNAHisGUG}} 0.89 {ATP}} 0.74 {ATP}} 0.655 {ATP}} 0.5
Substrates: ATP; @HIST01.txt*L-histidine!; tRNAHis [C]
Specific reaction: ATP + @HIST01.txt*L-histidine! + tRNAHis = AMP + diphosphate +L-histidyl-tRNAHis [C]
General reaction: Aminoacylation; Esterification [C]
Inhibitor: 1, 2, 4-Triazole-3-alanine; D-Histidine; Diphosphate; L-Histidinol; Mg2+; N-Acetyl histidine; NEM; p-Chloromercuribenzoate [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA