Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is hisZ [H]

Identifier: 91788460

GI number: 91788460

Start: 2728513

End: 2729691

Strand: Reverse

Name: hisZ [H]

Synonym: Bpro_2598

Alternate gene names: 91788460

Gene position: 2729691-2728513 (Counterclockwise)

Preceding gene: 91788461

Following gene: 91788459

Centisome position: 52.49

GC content: 63.19

Gene sequence:

>1179_bases
ATGTCCGCCTGGTTGTCATCATGGCAATTGCCCGATCAAATTGCCGATGTCCTGCCCTCCGAGGCGCGCCACATCGAAGA
GCTGCGCCGGCTGTTTCTCGACACCGCTCGCAGCTATGGCTATGAGTTGGTCATGCCGCCGCTGCTGGAGCATCTCGAGT
CGCTGCTCACCGGCACCGGCGAGGCACTGGATCTGCAGACTTTCAAGCTCGTTGACCAGCTCTCGGGCCGTACGCTGGGT
TTGCGGGCTGACACCACGCCGCAGGTCGCCCGCATTGATGCGCACCTGCTCAATCGCAGTGGCGTAGCCCGTCTGTGTTA
TTGCGGCCCGGTGCTGCATACCCGTGCCGACCGCCCTCATGCCACCCGGGAGCCTTTGCAGTTCGGGGCTGAAATATATG
GCCATGCCGGGCTGGAAGCCGACCTGGAGGCGCAGTCGCTGGCGCTGGAGGGCCTCAAGGCGGCGGGTGTGACCGCGTTG
AGTGTTGACATGGCCGATGCCCGCATTGTCAACAGCTTGCTGGCTGGCGCCGCCGTGAATGCCAAAACCCTGGCGCTTAT
CCATGCTGCGCTCGCGGCCAAGGATGCCAGCGAACTCGACAGCCTGACGGCCAGCTTGAAGGGCAGCCTTTCCGCTGCGG
CATGTGACGGTCTGAAAGCATTGTTGCAGCTTTACGGCGATGAAAAAGTCCTGCTGGAGGCTGAAAAAGTCCTCTCATCC
TGGCCCGATGCACAGAACGCGCTGCAAAATTTGAAGTGGCTGGCCGCGCACGTGGGTGATGTCAAGGTCAGCTTTGACTT
GGCCGATTTGCGAGGCTACGCCTATTACAGCGGTACCCGTTTTGCCATCTATGGGCAGGGCGCCGAGTTGGCGCGTGGCG
GCCGTTATGACGAGGTCGGTGCGGTGTTTGGTCGCAACCGTCCGGCCGTCGGCTTCAGTCTGGATCTCAAGGAACTGGTC
AGCGTGCTGCCGCCCCGGCCGCTCAGGGCCGCCATTCGTGCGCCATGGGGGGAAGATGCCGGCCTGCGCGCTGCCATCGC
CCGCCTTCGGGCCGGCGGCGAGACGGTGGCCTGTGTGCTTCCGGGCCATGAACATGAGGTCAATGAATTTGACTGCGACC
GCGAACTGGCCCATGCGGCCGGCCAATGGGTGGTCCAGCCCTTGAAAAAGGCGGCCTGA

Upstream 100 bases:

>100_bases
GTGCTTATTTGCACCCGGCAACCCCCTCTTGCCGCCCTTGGCCCAAAAGCGGCCTCCAAGCCCGGTAAAATCTGGTTTTT
AACAGCCCACGAAAATTACA

Downstream 100 bases:

>100_bases
AGCCGGGCCTCAGGCCGGCCTTCAATGCTGTTTTTCCCAACGAATCCTTAACGAGAAATTGAAGATGACATATAAACCAA
CCGTAGCCGCGGGCCGCAAT

Product: class II tRNA synthetase

Products: AMP; diphosphate +L-histidyl-tRNAHis [C]

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MSAWLSSWQLPDQIADVLPSEARHIEELRRLFLDTARSYGYELVMPPLLEHLESLLTGTGEALDLQTFKLVDQLSGRTLG
LRADTTPQVARIDAHLLNRSGVARLCYCGPVLHTRADRPHATREPLQFGAEIYGHAGLEADLEAQSLALEGLKAAGVTAL
SVDMADARIVNSLLAGAAVNAKTLALIHAALAAKDASELDSLTASLKGSLSAAACDGLKALLQLYGDEKVLLEAEKVLSS
WPDAQNALQNLKWLAAHVGDVKVSFDLADLRGYAYYSGTRFAIYGQGAELARGGRYDEVGAVFGRNRPAVGFSLDLKELV
SVLPPRPLRAAIRAPWGEDAGLRAAIARLRAGGETVACVLPGHEHEVNEFDCDRELAHAAGQWVVQPLKKAA

Sequences:

>Translated_392_residues
MSAWLSSWQLPDQIADVLPSEARHIEELRRLFLDTARSYGYELVMPPLLEHLESLLTGTGEALDLQTFKLVDQLSGRTLG
LRADTTPQVARIDAHLLNRSGVARLCYCGPVLHTRADRPHATREPLQFGAEIYGHAGLEADLEAQSLALEGLKAAGVTAL
SVDMADARIVNSLLAGAAVNAKTLALIHAALAAKDASELDSLTASLKGSLSAAACDGLKALLQLYGDEKVLLEAEKVLSS
WPDAQNALQNLKWLAAHVGDVKVSFDLADLRGYAYYSGTRFAIYGQGAELARGGRYDEVGAVFGRNRPAVGFSLDLKELV
SVLPPRPLRAAIRAPWGEDAGLRAAIARLRAGGETVACVLPGHEHEVNEFDCDRELAHAAGQWVVQPLKKAA
>Mature_391_residues
SAWLSSWQLPDQIADVLPSEARHIEELRRLFLDTARSYGYELVMPPLLEHLESLLTGTGEALDLQTFKLVDQLSGRTLGL
RADTTPQVARIDAHLLNRSGVARLCYCGPVLHTRADRPHATREPLQFGAEIYGHAGLEADLEAQSLALEGLKAAGVTALS
VDMADARIVNSLLAGAAVNAKTLALIHAALAAKDASELDSLTASLKGSLSAAACDGLKALLQLYGDEKVLLEAEKVLSSW
PDAQNALQNLKWLAAHVGDVKVSFDLADLRGYAYYSGTRFAIYGQGAELARGGRYDEVGAVFGRNRPAVGFSLDLKELVS
VLPPRPLRAAIRAPWGEDAGLRAAIARLRAGGETVACVLPGHEHEVNEFDCDRELAHAAGQWVVQPLKKAA

Specific function: Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine [H]

COG id: COG3705

COG function: function code E; ATP phosphoribosyltransferase involved in histidine biosynthesis

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. HisZ subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004517
- InterPro:   IPR004516 [H]

Pfam domain/function: NA

EC number: 6.1.1.21 [C]

Molecular weight: Translated: 42061; Mature: 41930

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAWLSSWQLPDQIADVLPSEARHIEELRRLFLDTARSYGYELVMPPLLEHLESLLTGTG
CCCCHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHCCCC
EALDLQTFKLVDQLSGRTLGLRADTTPQVARIDAHLLNRSGVARLCYCGPVLHTRADRPH
CCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHCHHHHCCCCCCC
ATREPLQFGAEIYGHAGLEADLEAQSLALEGLKAAGVTALSVDMADARIVNSLLAGAAVN
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCC
AKTLALIHAALAAKDASELDSLTASLKGSLSAAACDGLKALLQLYGDEKVLLEAEKVLSS
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
WPDAQNALQNLKWLAAHVGDVKVSFDLADLRGYAYYSGTRFAIYGQGAELARGGRYDEVG
CCCHHHHHHHHHHHHHHHCCEEEEEEHHHHCCEEEECCCEEEEEECCHHHHCCCCCHHHH
AVFGRNRPAVGFSLDLKELVSVLPPRPLRAAIRAPWGEDAGLRAAIARLRAGGETVACVL
HHHCCCCCCCEEECCHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEE
PGHEHEVNEFDCDRELAHAAGQWVVQPLKKAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAWLSSWQLPDQIADVLPSEARHIEELRRLFLDTARSYGYELVMPPLLEHLESLLTGTG
CCCHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHCCCC
EALDLQTFKLVDQLSGRTLGLRADTTPQVARIDAHLLNRSGVARLCYCGPVLHTRADRPH
CCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHCHHHHCCCCCCC
ATREPLQFGAEIYGHAGLEADLEAQSLALEGLKAAGVTALSVDMADARIVNSLLAGAAVN
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCC
AKTLALIHAALAAKDASELDSLTASLKGSLSAAACDGLKALLQLYGDEKVLLEAEKVLSS
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
WPDAQNALQNLKWLAAHVGDVKVSFDLADLRGYAYYSGTRFAIYGQGAELARGGRYDEVG
CCCHHHHHHHHHHHHHHHCCEEEEEEHHHHCCEEEECCCEEEEEECCHHHHCCCCCHHHH
AVFGRNRPAVGFSLDLKELVSVLPPRPLRAAIRAPWGEDAGLRAAIARLRAGGETVACVL
HHHCCCCCCCEEECCHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEE
PGHEHEVNEFDCDRELAHAAGQWVVQPLKKAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mg2+ [C]

Kcat value (1/min): 8520 [C]

Specific activity: 121.8

Km value (mM): 0.06 {His}} 0.046 {His}} 0.03 {His}} 0.02 {His}} 0.017 {His}} 0.011 {His}} 0.008 {His}} 0.0014 {tRNAHis}} 0.00056 {tRNAHis}} 0.0016 {U73tRNAHisGUG}} 0.00031 {U73tRNAHisGUG}} 0.89 {ATP}} 0.74 {ATP}} 0.655 {ATP}} 0.5

Substrates: ATP; @HIST01.txt*L-histidine!; tRNAHis [C]

Specific reaction: ATP + @HIST01.txt*L-histidine! + tRNAHis = AMP + diphosphate +L-histidyl-tRNAHis [C]

General reaction: Aminoacylation; Esterification [C]

Inhibitor: 1, 2, 4-Triazole-3-alanine; D-Histidine; Diphosphate; L-Histidinol; Mg2+; N-Acetyl histidine; NEM; p-Chloromercuribenzoate [C]

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA