| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is purA [H]
Identifier: 91788459
GI number: 91788459
Start: 2727108
End: 2728448
Strand: Reverse
Name: purA [H]
Synonym: Bpro_2597
Alternate gene names: 91788459
Gene position: 2728448-2727108 (Counterclockwise)
Preceding gene: 91788460
Following gene: 91788458
Centisome position: 52.47
GC content: 61.52
Gene sequence:
>1341_bases ATGACATATAAACCAACCGTAGCCGCGGGCCGCAATGTTGTGGTCGTGGGCACCCAGTGGGGCGACGAAGGCAAGGGCAA GCTGGTCGACTGGCTTACCGAAATGTCCCAGGGTGTGGTGCGCTTTCAGGGTGGCCACAATGCCGGCCATACACTGGTCA TCAACGGCATCAAGACTGCCTTGCACCTGATTCCCAGCGGCATCATGCGTCCTGGTGTGAAATGCTACATCGGCAACGGC GTGGTGCTCTCGGCGGCCAAGCTGTTTGAAGAAATTGAAGGGCTGGAAAAAGCCGGCGTGGAAGTGCGCTCACGTTTGCG CATCAGCGAAGCCTGCCCGCTGATCCTGCCTTTTCATGCAGCGCTCGACATTGCCCGCGAGGCTTACCGCGAAAAGGGCG GTACCGCCAGGATAGGCACCACCGGCCGCGGTATTGGCCCGGCCTACGAAGACAAAATCGCGCGCCGCGCGCTGCGCGTG CAGGACCTCAAATACCCCGAGCGTTTTGCCGCCAAGCTGCGCGAGTTGCTGGATTTGCACAACTTTGTGCTGACCGGTTA TTTGCACGCGCCGGCGATTGATTTTGACACCGTGTATGCCGAAGCCATGCGGCACGCCGAACTCCTCAAGCCAATGATGG CGGATGTCTCGCGCGAACTCAACGATGCGAACCGCGAAGGTGCCAATCTGCTGTTCGAGGGCGCGCAGGGCACCCTGCTC GATGTGGACCACGGTACCTATCCCTACGTGACATCCAGCAACTGCGTGGCGGGCAATGCCGCTGCCGGCGCGGGTGTGGG CCCGGGCATGCTGCACTACATCCTGGGCATCACCAAGGCTTATTGCACGCGCGTGGGCGGTGGGCCTTTCCCGACCGAGC TGGATTGGGAAACGCCGGACACCGTGGGCTACCACCTCAGCACCGTGGGCGCCGAAAAAGGGGTGACCACTGGTCGTAGC CGACGCTGCGGGTGGTTTGACGCTGCGCTGCTCAAGCGCTCCGCCCAGGTCAATGGCCTGTCGGGTCTGTGTATCACCAA GCTTGACGTGCTCGACGGCATTGCCGAGCTCAAGCTGTGCACCGGTTATGAACTCGATGGCCACATTACCGACATCCTGC CCATGGGCGCCGAAGACATCGAGCGTTGCAAGCCCATTTATGAAACCCTGCCGGGCTGGAGCCAGAGCACGGTGGGCGTC ACGCAATACGACCAGCTGCCGGCTGCGGCGCAGAAATATCTCCACCGGATCGAAGAGGTGACCGGTGTGCCGATTGACAT GATTTCCACCAGCCCGGATCGCGACCATACCATCCTGCTGCGCAATCCCTACGCCGCCTGA
Upstream 100 bases:
>100_bases CAATGGGTGGTCCAGCCCTTGAAAAAGGCGGCCTGAAGCCGGGCCTCAGGCCGGCCTTCAATGCTGTTTTTCCCAACGAA TCCTTAACGAGAAATTGAAG
Downstream 100 bases:
>100_bases CCCCGGTAATTTTTGAATCAAAAAAACAGGCGCCCGGACCATGCATTGCGGCGCCTGGCTATTAAATCAGGAGCAATCCC ATGTTGACCGAAGACGGCAA
Product: adenylosuccinate synthetase
Products: NA
Alternate protein names: AMPSase; AdSS; IMP--aspartate ligase [H]
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MTYKPTVAAGRNVVVVGTQWGDEGKGKLVDWLTEMSQGVVRFQGGHNAGHTLVINGIKTALHLIPSGIMRPGVKCYIGNG VVLSAAKLFEEIEGLEKAGVEVRSRLRISEACPLILPFHAALDIAREAYREKGGTARIGTTGRGIGPAYEDKIARRALRV QDLKYPERFAAKLRELLDLHNFVLTGYLHAPAIDFDTVYAEAMRHAELLKPMMADVSRELNDANREGANLLFEGAQGTLL DVDHGTYPYVTSSNCVAGNAAAGAGVGPGMLHYILGITKAYCTRVGGGPFPTELDWETPDTVGYHLSTVGAEKGVTTGRS RRCGWFDAALLKRSAQVNGLSGLCITKLDVLDGIAELKLCTGYELDGHITDILPMGAEDIERCKPIYETLPGWSQSTVGV TQYDQLPAAAQKYLHRIEEVTGVPIDMISTSPDRDHTILLRNPYAA
Sequences:
>Translated_446_residues MTYKPTVAAGRNVVVVGTQWGDEGKGKLVDWLTEMSQGVVRFQGGHNAGHTLVINGIKTALHLIPSGIMRPGVKCYIGNG VVLSAAKLFEEIEGLEKAGVEVRSRLRISEACPLILPFHAALDIAREAYREKGGTARIGTTGRGIGPAYEDKIARRALRV QDLKYPERFAAKLRELLDLHNFVLTGYLHAPAIDFDTVYAEAMRHAELLKPMMADVSRELNDANREGANLLFEGAQGTLL DVDHGTYPYVTSSNCVAGNAAAGAGVGPGMLHYILGITKAYCTRVGGGPFPTELDWETPDTVGYHLSTVGAEKGVTTGRS RRCGWFDAALLKRSAQVNGLSGLCITKLDVLDGIAELKLCTGYELDGHITDILPMGAEDIERCKPIYETLPGWSQSTVGV TQYDQLPAAAQKYLHRIEEVTGVPIDMISTSPDRDHTILLRNPYAA >Mature_445_residues TYKPTVAAGRNVVVVGTQWGDEGKGKLVDWLTEMSQGVVRFQGGHNAGHTLVINGIKTALHLIPSGIMRPGVKCYIGNGV VLSAAKLFEEIEGLEKAGVEVRSRLRISEACPLILPFHAALDIAREAYREKGGTARIGTTGRGIGPAYEDKIARRALRVQ DLKYPERFAAKLRELLDLHNFVLTGYLHAPAIDFDTVYAEAMRHAELLKPMMADVSRELNDANREGANLLFEGAQGTLLD VDHGTYPYVTSSNCVAGNAAAGAGVGPGMLHYILGITKAYCTRVGGGPFPTELDWETPDTVGYHLSTVGAEKGVTTGRSR RCGWFDAALLKRSAQVNGLSGLCITKLDVLDGIAELKLCTGYELDGHITDILPMGAEDIERCKPIYETLPGWSQSTVGVT QYDQLPAAAQKYLHRIEEVTGVPIDMISTSPDRDHTILLRNPYAA
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP [H]
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family [H]
Homologues:
Organism=Homo sapiens, GI34577063, Length=439, Percent_Identity=40.3189066059225, Blast_Score=312, Evalue=4e-85, Organism=Homo sapiens, GI22748717, Length=433, Percent_Identity=40.4157043879908, Blast_Score=310, Evalue=1e-84, Organism=Homo sapiens, GI40316944, Length=401, Percent_Identity=39.1521197007481, Blast_Score=276, Evalue=2e-74, Organism=Escherichia coli, GI1790620, Length=438, Percent_Identity=59.3607305936073, Blast_Score=512, Evalue=1e-146, Organism=Caenorhabditis elegans, GI25146553, Length=434, Percent_Identity=40.7834101382488, Blast_Score=307, Evalue=8e-84, Organism=Caenorhabditis elegans, GI25146555, Length=434, Percent_Identity=40.7834101382488, Blast_Score=306, Evalue=1e-83, Organism=Saccharomyces cerevisiae, GI6324109, Length=434, Percent_Identity=42.8571428571429, Blast_Score=333, Evalue=3e-92, Organism=Drosophila melanogaster, GI21356033, Length=431, Percent_Identity=41.2993039443155, Blast_Score=302, Evalue=4e-82,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018220 - InterPro: IPR001114 [H]
Pfam domain/function: PF00709 Adenylsucc_synt [H]
EC number: =6.3.4.4 [H]
Molecular weight: Translated: 48271; Mature: 48140
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1 ; PS00513 ADENYLOSUCCIN_SYN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYKPTVAAGRNVVVVGTQWGDEGKGKLVDWLTEMSQGVVRFQGGHNAGHTLVINGIKTA CCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCEEEEEHHHHH LHLIPSGIMRPGVKCYIGNGVVLSAAKLFEEIEGLEKAGVEVRSRLRISEACPLILPFHA HHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEHHHH ALDIAREAYREKGGTARIGTTGRGIGPAYEDKIARRALRVQDLKYPERFAAKLRELLDLH HHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NFVLTGYLHAPAIDFDTVYAEAMRHAELLKPMMADVSRELNDANREGANLLFEGAQGTLL HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEE DVDHGTYPYVTSSNCVAGNAAAGAGVGPGMLHYILGITKAYCTRVGGGPFPTELDWETPD ECCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC TVGYHLSTVGAEKGVTTGRSRRCGWFDAALLKRSAQVNGLSGLCITKLDVLDGIAELKLC CCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC TGYELDGHITDILPMGAEDIERCKPIYETLPGWSQSTVGVTQYDQLPAAAQKYLHRIEEV CCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHH TGVPIDMISTSPDRDHTILLRNPYAA CCCCEEEECCCCCCCCEEEECCCCCC >Mature Secondary Structure TYKPTVAAGRNVVVVGTQWGDEGKGKLVDWLTEMSQGVVRFQGGHNAGHTLVINGIKTA CCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCEEEEEHHHHH LHLIPSGIMRPGVKCYIGNGVVLSAAKLFEEIEGLEKAGVEVRSRLRISEACPLILPFHA HHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEHHHH ALDIAREAYREKGGTARIGTTGRGIGPAYEDKIARRALRVQDLKYPERFAAKLRELLDLH HHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NFVLTGYLHAPAIDFDTVYAEAMRHAELLKPMMADVSRELNDANREGANLLFEGAQGTLL HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEE DVDHGTYPYVTSSNCVAGNAAAGAGVGPGMLHYILGITKAYCTRVGGGPFPTELDWETPD ECCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC TVGYHLSTVGAEKGVTTGRSRRCGWFDAALLKRSAQVNGLSGLCITKLDVLDGIAELKLC CCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC TGYELDGHITDILPMGAEDIERCKPIYETLPGWSQSTVGVTQYDQLPAAAQKYLHRIEEV CCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHH TGVPIDMISTSPDRDHTILLRNPYAA CCCCEEEECCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA