| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788455
Identifier: 91788455
GI number: 91788455
Start: 2719467
End: 2720564
Strand: Reverse
Name: 91788455
Synonym: Bpro_2593
Alternate gene names: NA
Gene position: 2720564-2719467 (Counterclockwise)
Preceding gene: 91788456
Following gene: 91788454
Centisome position: 52.32
GC content: 65.39
Gene sequence:
>1098_bases ATGAGCACACTCCAGGTCAGTTTGGCGGTGGTGGGCGGCTTGGTGCTGGCAGGCGTGGTGGCTCACAGCGCCTGGTCGTC GCGCAGAAACCTGCCCAAGCGGGCCACACCACCCGTGCCTCCCGCACAGGAGCCCGCACAGCATCAGGCGCCAATGCAGG CACCCACTACAGCGCCTGACGTACTGGCCGAGCGACAGGAGCCCAGCTTTGATACAGATATGGATGGCGACTCTGGCCTG CCCTCCCTGGCGAGCCTCACCACGCCCCCCGACAGAAAACCCGGTCTGGACGTCCTGATCGACGCCGTGGCGCCGGTGGT GCTTGAGTCGGTGGTGTCGGGTGACGCCGCGTTGGCCGCGATGCCCAGTACCCGCCGCGTCGGCAGCAAACCCTTCGGGG TAGAGGGCCTCAGCGTGACCACCGGCGAATGGGAGTTTCCCACCGCCGGTCATCGCTACAGCGCCTTCCAGTGCGGCGTG CAACTGGCCAATCGAACTGGTGCGCTCAACCAGATCGAGTACTCGGAATTCGTCATGAAGGCGCAGGCCTTTGCCGACGC CATTGGGGGCGAGCCAGAATTTCCTGAAATGCTCGACGAGGTTGCACGTGCCAGGGAACTGGACCAGTTCGCCAGCGGGC ACGATGCCCAGTTGAGCTTCACCCTGCGCGCCATTCACACAGCCTGGAGCCCAGGTTATGTGCAGCAAAGCGCCGCAAGG CTCGGTTTTGTAGCCGGCTCCATCCCCGGCCGCATGGTGCTGCCCGCCAGTCAGCCGGGCCATGCGCCAATTCTGGGCCT GGCCTTCGATACGCAGGCCGCCATGGCGGACGACCCCGAACAAACGGCGTTGCGCGAGCTTACGCTGTCCCTGGACGTGC CGCAAGTCCTGCGCTCCGAGCAGCCGTTTGCGCGCATGTGCGAGGTCGCCATGGCCCTGGCCGCCAGCATGGATGGCGTG ATCATCGACGACAACGGCAACCTCATCCGGCCAGAAGCCATGGACGTGATCCATGCCGACCTGGAACAGCTCTATGACAC GCTGGACGGCCGCGACCTGTCGGCCGGCTCTGTGCTGGGCAGGCGTCTGTTTTCCTGA
Upstream 100 bases:
>100_bases GGAAGCGCGCCGCCCCCGTCCCACCTGCGTGGGATGGAGCGGGCGACAAGGGGGATAAGTGCGATAAGTGCGCCGAGGCT GGCGCGGGGGCGCGTCTCGC
Downstream 100 bases:
>100_bases CTTTCCCGGGCTTGCCGCTCACTTTTGACCTTTTTCATGGCCACCAAAGACCTGTTTGCGCAGCCGGAGCCTTCGCGGCA GCCGGCGTCCCCTGCTGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MSTLQVSLAVVGGLVLAGVVAHSAWSSRRNLPKRATPPVPPAQEPAQHQAPMQAPTTAPDVLAERQEPSFDTDMDGDSGL PSLASLTTPPDRKPGLDVLIDAVAPVVLESVVSGDAALAAMPSTRRVGSKPFGVEGLSVTTGEWEFPTAGHRYSAFQCGV QLANRTGALNQIEYSEFVMKAQAFADAIGGEPEFPEMLDEVARARELDQFASGHDAQLSFTLRAIHTAWSPGYVQQSAAR LGFVAGSIPGRMVLPASQPGHAPILGLAFDTQAAMADDPEQTALRELTLSLDVPQVLRSEQPFARMCEVAMALAASMDGV IIDDNGNLIRPEAMDVIHADLEQLYDTLDGRDLSAGSVLGRRLFS
Sequences:
>Translated_365_residues MSTLQVSLAVVGGLVLAGVVAHSAWSSRRNLPKRATPPVPPAQEPAQHQAPMQAPTTAPDVLAERQEPSFDTDMDGDSGL PSLASLTTPPDRKPGLDVLIDAVAPVVLESVVSGDAALAAMPSTRRVGSKPFGVEGLSVTTGEWEFPTAGHRYSAFQCGV QLANRTGALNQIEYSEFVMKAQAFADAIGGEPEFPEMLDEVARARELDQFASGHDAQLSFTLRAIHTAWSPGYVQQSAAR LGFVAGSIPGRMVLPASQPGHAPILGLAFDTQAAMADDPEQTALRELTLSLDVPQVLRSEQPFARMCEVAMALAASMDGV IIDDNGNLIRPEAMDVIHADLEQLYDTLDGRDLSAGSVLGRRLFS >Mature_364_residues STLQVSLAVVGGLVLAGVVAHSAWSSRRNLPKRATPPVPPAQEPAQHQAPMQAPTTAPDVLAERQEPSFDTDMDGDSGLP SLASLTTPPDRKPGLDVLIDAVAPVVLESVVSGDAALAAMPSTRRVGSKPFGVEGLSVTTGEWEFPTAGHRYSAFQCGVQ LANRTGALNQIEYSEFVMKAQAFADAIGGEPEFPEMLDEVARARELDQFASGHDAQLSFTLRAIHTAWSPGYVQQSAARL GFVAGSIPGRMVLPASQPGHAPILGLAFDTQAAMADDPEQTALRELTLSLDVPQVLRSEQPFARMCEVAMALAASMDGVI IDDNGNLIRPEAMDVIHADLEQLYDTLDGRDLSAGSVLGRRLFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38688; Mature: 38557
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLQVSLAVVGGLVLAGVVAHSAWSSRRNLPKRATPPVPPAQEPAQHQAPMQAPTTAPD CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHH VLAERQEPSFDTDMDGDSGLPSLASLTTPPDRKPGLDVLIDAVAPVVLESVVSGDAALAA HHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEE MPSTRRVGSKPFGVEGLSVTTGEWEFPTAGHRYSAFQCGVQLANRTGALNQIEYSEFVMK CCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH AQAFADAIGGEPEFPEMLDEVARARELDQFASGHDAQLSFTLRAIHTAWSPGYVQQSAAR HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHCCCCCHHHHHHHH LGFVAGSIPGRMVLPASQPGHAPILGLAFDTQAAMADDPEQTALRELTLSLDVPQVLRSE HHHHCCCCCCCEEECCCCCCCCCEEEEEECCCHHHCCCHHHHHHHHHHHCCCCHHHHCCC QPFARMCEVAMALAASMDGVIIDDNGNLIRPEAMDVIHADLEQLYDTLDGRDLSAGSVLG CHHHHHHHHHHHHHHCCCCEEECCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH RRLFS HHHCC >Mature Secondary Structure STLQVSLAVVGGLVLAGVVAHSAWSSRRNLPKRATPPVPPAQEPAQHQAPMQAPTTAPD CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHH VLAERQEPSFDTDMDGDSGLPSLASLTTPPDRKPGLDVLIDAVAPVVLESVVSGDAALAA HHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEE MPSTRRVGSKPFGVEGLSVTTGEWEFPTAGHRYSAFQCGVQLANRTGALNQIEYSEFVMK CCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH AQAFADAIGGEPEFPEMLDEVARARELDQFASGHDAQLSFTLRAIHTAWSPGYVQQSAAR HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHCCCCCHHHHHHHH LGFVAGSIPGRMVLPASQPGHAPILGLAFDTQAAMADDPEQTALRELTLSLDVPQVLRSE HHHHCCCCCCCEEECCCCCCCCCEEEEEECCCHHHCCCHHHHHHHHHHHCCCCHHHHCCC QPFARMCEVAMALAASMDGVIIDDNGNLIRPEAMDVIHADLEQLYDTLDGRDLSAGSVLG CHHHHHHHHHHHHHHCCCCEEECCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH RRLFS HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA