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The map label for this gene is hofB [C]

Identifier: 91788417

GI number: 91788417

Start: 2675933

End: 2677327

Strand: Direct

Name: hofB [C]

Synonym: Bpro_2555

Alternate gene names: 91788417

Gene position: 2675933-2677327 (Clockwise)

Preceding gene: 91788416

Following gene: 91788418

Centisome position: 51.46

GC content: 60.86

Gene sequence:

>1395_bases
ATGAATGCAGAAAACATCTCAATCAGGGAACGCCTGGGCACCGGGGGCGGCAGCGGCAATGTCAACGGCGCCATGAAGGG
TACCGCGCAAATTTCCAGCTCGCGCCCAGGCGGCATCGACAACCGCGCCTATCAGGAGCTGAAGCACCACATCCACCAAA
CCCTGCTGGACCGGGTTGACCTGGAAAGCATGCAGCGCCTTTCGCAGGTGCAGATTCGGGAAGAGCTGCGGATGCTCGTC
GAACGCCTGCTCGAGGAAGAAGTCGTCGTCATCAACGAGACCGAGCGAAAGAACCTGACGCGCGATATCCAGAACGAGAT
GCTCGGGTTTGGTCCGCTGGAGACGCTGCTGGCCGACCCAACCGTGTCCGACATACTCGTCAACACCTACAAGCAGGTGT
ACGTGGAGCGCAGGGGCAAGCTGGAGCTGACCGATGTGACGTTCTCCAATGACGCGCACCTGATGAAGATCATTGACAAG
ATTGTCTCGCGTGTTGGCCGGCGCATTGATGAGTCCAGCCCCATGGTGGACGCGCGACTGCCCGACGGCTCGCGTGTCAA
TGCCATCATTCCGCCGCTCGCCATTGATGGCCCCATCATGTCGATTCGCCGGTTTGCCGCCCAACCGCTGCGCCTGGCCG
ATCTGGTCGAATTCAAGAGCCTGACCGCTGAAATGGCGGAAATTCTGCGGGGGCTGGGCAAGGCCAAGGTCAACATCCTG
ATCTCTGGCGGCACAGGCAGCGGCAAGACCACCATGCTCAATGTGATCTCGGGCTTCATCAGCGAGGCCGAACGCATCGT
GACCGTGGAGGATGCGGCCGAGCTGCAACTTCAGCAGCCGCACATCGTGCGCCTGGAGACACGCCCGCCGAATATCGAGG
GCAAGGGCGAGGTGACCCAGCGGGCGCTGGTGCGCAACGCGCTGCGCATGCGACCAGACCGCATCATTCTGGGCGAGGTG
CGCGGCGGCGAGGCGCTAGACATGCTGCAGGCCATGAACACCGGTCATGAGGGATCGATGGCCACCATACACGCCAACAC
CTCGCGCGATGCGCTCACCCGGCTGGAGAACATGGTCAGTATGGCCGTGGCGACCTTGCCCACCAAGGCCATGCGCCAGC
AGATCAGCTCGGCGATCAGCGTGGTGGTGCAGGTGGCGCGGCTGACCGATGGCAAGCGCAAGATAGTTTCCGTCCAGGAG
ATCACCGGCATGGAAGGCGAAGTGATCACCATGCAGGAAATTTTTACCTTCAAACAGACAGGACTGGGCGAAAACGGCGC
AGTTCTCGGGTATTTCTGTGCCACCGGTGTTCGCCCGCGATTTCTGGAGAGGCTGCAGGCGTTTGGTATCAGCGTTTCAG
ACAAACTGTTTGACCCCACACGGCAGTATCACTGA

Upstream 100 bases:

>100_bases
ACCAGGCGTCCCAGGGTTGGTTTTCGCGGGTTTTCCAGCGTGCCTGATGTACTGAACGTTCAGGATTATTCAGGATGAGT
TAGCCAACGGAGATATCGCC

Downstream 100 bases:

>100_bases
GCAGTATCACTGAGGCAGCACCACTGAACGACCATGGACTATCTCTACTACCTTTTTGCCACGCTGATTTTCATTGCGGT
GGTCCTTCTGGTTGAGGGCC

Product: type II secretion system protein E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MNAENISIRERLGTGGGSGNVNGAMKGTAQISSSRPGGIDNRAYQELKHHIHQTLLDRVDLESMQRLSQVQIREELRMLV
ERLLEEEVVVINETERKNLTRDIQNEMLGFGPLETLLADPTVSDILVNTYKQVYVERRGKLELTDVTFSNDAHLMKIIDK
IVSRVGRRIDESSPMVDARLPDGSRVNAIIPPLAIDGPIMSIRRFAAQPLRLADLVEFKSLTAEMAEILRGLGKAKVNIL
ISGGTGSGKTTMLNVISGFISEAERIVTVEDAAELQLQQPHIVRLETRPPNIEGKGEVTQRALVRNALRMRPDRIILGEV
RGGEALDMLQAMNTGHEGSMATIHANTSRDALTRLENMVSMAVATLPTKAMRQQISSAISVVVQVARLTDGKRKIVSVQE
ITGMEGEVITMQEIFTFKQTGLGENGAVLGYFCATGVRPRFLERLQAFGISVSDKLFDPTRQYH

Sequences:

>Translated_464_residues
MNAENISIRERLGTGGGSGNVNGAMKGTAQISSSRPGGIDNRAYQELKHHIHQTLLDRVDLESMQRLSQVQIREELRMLV
ERLLEEEVVVINETERKNLTRDIQNEMLGFGPLETLLADPTVSDILVNTYKQVYVERRGKLELTDVTFSNDAHLMKIIDK
IVSRVGRRIDESSPMVDARLPDGSRVNAIIPPLAIDGPIMSIRRFAAQPLRLADLVEFKSLTAEMAEILRGLGKAKVNIL
ISGGTGSGKTTMLNVISGFISEAERIVTVEDAAELQLQQPHIVRLETRPPNIEGKGEVTQRALVRNALRMRPDRIILGEV
RGGEALDMLQAMNTGHEGSMATIHANTSRDALTRLENMVSMAVATLPTKAMRQQISSAISVVVQVARLTDGKRKIVSVQE
ITGMEGEVITMQEIFTFKQTGLGENGAVLGYFCATGVRPRFLERLQAFGISVSDKLFDPTRQYH
>Mature_464_residues
MNAENISIRERLGTGGGSGNVNGAMKGTAQISSSRPGGIDNRAYQELKHHIHQTLLDRVDLESMQRLSQVQIREELRMLV
ERLLEEEVVVINETERKNLTRDIQNEMLGFGPLETLLADPTVSDILVNTYKQVYVERRGKLELTDVTFSNDAHLMKIIDK
IVSRVGRRIDESSPMVDARLPDGSRVNAIIPPLAIDGPIMSIRRFAAQPLRLADLVEFKSLTAEMAEILRGLGKAKVNIL
ISGGTGSGKTTMLNVISGFISEAERIVTVEDAAELQLQQPHIVRLETRPPNIEGKGEVTQRALVRNALRMRPDRIILGEV
RGGEALDMLQAMNTGHEGSMATIHANTSRDALTRLENMVSMAVATLPTKAMRQQISSAISVVVQVARLTDGKRKIVSVQE
ITGMEGEVITMQEIFTFKQTGLGENGAVLGYFCATGVRPRFLERLQAFGISVSDKLFDPTRQYH

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1786296, Length=189, Percent_Identity=28.042328042328, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 51240; Mature: 51240

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAENISIRERLGTGGGSGNVNGAMKGTAQISSSRPGGIDNRAYQELKHHIHQTLLDRVD
CCCCCCCHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCC
LESMQRLSQVQIREELRMLVERLLEEEVVVINETERKNLTRDIQNEMLGFGPLETLLADP
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCHHHHHCCC
TVSDILVNTYKQVYVERRGKLELTDVTFSNDAHLMKIIDKIVSRVGRRIDESSPMVDARL
CHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
PDGSRVNAIIPPLAIDGPIMSIRRFAAQPLRLADLVEFKSLTAEMAEILRGLGKAKVNIL
CCCCCCCEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
ISGGTGSGKTTMLNVISGFISEAERIVTVEDAAELQLQQPHIVRLETRPPNIEGKGEVTQ
EECCCCCCHHHHHHHHHHHHHHHHHEEEECCHHHHEECCCCEEEEECCCCCCCCCCHHHH
RALVRNALRMRPDRIILGEVRGGEALDMLQAMNTGHEGSMATIHANTSRDALTRLENMVS
HHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHH
MAVATLPTKAMRQQISSAISVVVQVARLTDGKRKIVSVQEITGMEGEVITMQEIFTFKQT
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHHCCCCCCEEEHHHHHHHHHC
GLGENGAVLGYFCATGVRPRFLERLQAFGISVSDKLFDPTRQYH
CCCCCCCEEEEHHHCCCCHHHHHHHHHHCCCCCHHHCCCHHCCC
>Mature Secondary Structure
MNAENISIRERLGTGGGSGNVNGAMKGTAQISSSRPGGIDNRAYQELKHHIHQTLLDRVD
CCCCCCCHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCC
LESMQRLSQVQIREELRMLVERLLEEEVVVINETERKNLTRDIQNEMLGFGPLETLLADP
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCHHHHHCCC
TVSDILVNTYKQVYVERRGKLELTDVTFSNDAHLMKIIDKIVSRVGRRIDESSPMVDARL
CHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
PDGSRVNAIIPPLAIDGPIMSIRRFAAQPLRLADLVEFKSLTAEMAEILRGLGKAKVNIL
CCCCCCCEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
ISGGTGSGKTTMLNVISGFISEAERIVTVEDAAELQLQQPHIVRLETRPPNIEGKGEVTQ
EECCCCCCHHHHHHHHHHHHHHHHHEEEECCHHHHEECCCCEEEEECCCCCCCCCCHHHH
RALVRNALRMRPDRIILGEVRGGEALDMLQAMNTGHEGSMATIHANTSRDALTRLENMVS
HHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHH
MAVATLPTKAMRQQISSAISVVVQVARLTDGKRKIVSVQEITGMEGEVITMQEIFTFKQT
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHHCCCCCCEEEHHHHHHHHHC
GLGENGAVLGYFCATGVRPRFLERLQAFGISVSDKLFDPTRQYH
CCCCCCCEEEEHHHCCCCHHHHHHHHHHCCCCCHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]