Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788348

Identifier: 91788348

GI number: 91788348

Start: 2600831

End: 2601871

Strand: Direct

Name: 91788348

Synonym: Bpro_2485

Alternate gene names: NA

Gene position: 2600831-2601871 (Clockwise)

Preceding gene: 91788347

Following gene: 91788349

Centisome position: 50.01

GC content: 60.9

Gene sequence:

>1041_bases
ATGACGAGATCGAGGTTCCCAAGGCAGTATTCACCAACGATTACCAGGAGACTTTCAATGACTCAATATCTTCGCCGGAT
TGCGACGGCGCTCATGCTCATAGGCGCCCTGTGCAGCGGTCAGGCCGCCATCGCCAAGGATTGGCCCACCCAGTCGATCC
GCATTGTTCTTCCGTACCCGCCCGGCGGTGCCTCGGATGTCACCGCCAGGCTCTTGGGCATGAAGATGGGACAGGCCTGG
GAAACAACGGTCGTCATCGAGAACCGGCCGGGAGCCAACGGCATCATTGCCAACGAAGCCGCGGCCAAATCCCCGGCCGA
TGGCTACACCATTCTGATGGCCAATCTCGGGCCGAATGCCATCAACCCGGCGGTTTACGCCAAGCTGCCCTACGACACGG
TGAAGGATTTCGCGCCCGTCATTCTCACCACGATCGTTCCGCTGGTGATCGTGACCGCGGCTGATTCACCAGTGAAAAGT
CTGGCGCAGCTGATTGCCCTGGCCAAGGAAAAGCCCGGGCAAATTACCTTCGGCTCTGCCGGCAAAGGGGCGGGCAGTCA
TCTTGCCGGTGAACTGCTCGCAGTGACGACCGGGGCCAAGATGCTACACGTGCCGTACAAGGGCGACGCACCAGCGATCA
TCGACGTGATGGGAGGGCAGCTCACGATCGCGCTGCCCACGGCGCTCGCCGGCGTGCCGCATGTCAAGAACGGGAAACTC
CGGGCGCTGGCCGTCACCAGCCAAAAGCGGATCGCATCGTTGCCTGATGTCCCGACGGTGAACGAGGCACTCGGCATCAG
CGGCTATGAAGCCGTGTCCTGGGGCGGGCTGATGGTACCCACCGGTACCCCTGCGGAGGTCATTGCCAAAATCAATGCGG
AAACCAACAAAGCCCTGCAGATGCCCGATGTCAAAGTGAAGCTGATGGCGCAAGGCGCTGAGATTGTCGGCGGTACGCCG
GAGGCCTTCAACACTTTCCTGCGAGCGGAACTCGTCAAGTGGAAGCATGTAGCCGACGTCGCTAAAGTCCGTCTCGACTG
A

Upstream 100 bases:

>100_bases
CCAGCGCTGGGGGAGCACACCGAAGAAATACTGGCCACGGAACTGGGCTGGTCTGCTGAGCAAATTTCCGCCTCGAAGCA
AAAGGGAGCGATTTGAGGCC

Downstream 100 bases:

>100_bases
CGGAGCGTAGAAAACGGTGTCGGGGCCGCACTGCGCACAGTTGCGCAGTGCGGCCCCGACACCCGGATACTGTTGAGTTT
TCCATAATCCATGACATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MTRSRFPRQYSPTITRRLSMTQYLRRIATALMLIGALCSGQAAIAKDWPTQSIRIVLPYPPGGASDVTARLLGMKMGQAW
ETTVVIENRPGANGIIANEAAAKSPADGYTILMANLGPNAINPAVYAKLPYDTVKDFAPVILTTIVPLVIVTAADSPVKS
LAQLIALAKEKPGQITFGSAGKGAGSHLAGELLAVTTGAKMLHVPYKGDAPAIIDVMGGQLTIALPTALAGVPHVKNGKL
RALAVTSQKRIASLPDVPTVNEALGISGYEAVSWGGLMVPTGTPAEVIAKINAETNKALQMPDVKVKLMAQGAEIVGGTP
EAFNTFLRAELVKWKHVADVAKVRLD

Sequences:

>Translated_346_residues
MTRSRFPRQYSPTITRRLSMTQYLRRIATALMLIGALCSGQAAIAKDWPTQSIRIVLPYPPGGASDVTARLLGMKMGQAW
ETTVVIENRPGANGIIANEAAAKSPADGYTILMANLGPNAINPAVYAKLPYDTVKDFAPVILTTIVPLVIVTAADSPVKS
LAQLIALAKEKPGQITFGSAGKGAGSHLAGELLAVTTGAKMLHVPYKGDAPAIIDVMGGQLTIALPTALAGVPHVKNGKL
RALAVTSQKRIASLPDVPTVNEALGISGYEAVSWGGLMVPTGTPAEVIAKINAETNKALQMPDVKVKLMAQGAEIVGGTP
EAFNTFLRAELVKWKHVADVAKVRLD
>Mature_345_residues
TRSRFPRQYSPTITRRLSMTQYLRRIATALMLIGALCSGQAAIAKDWPTQSIRIVLPYPPGGASDVTARLLGMKMGQAWE
TTVVIENRPGANGIIANEAAAKSPADGYTILMANLGPNAINPAVYAKLPYDTVKDFAPVILTTIVPLVIVTAADSPVKSL
AQLIALAKEKPGQITFGSAGKGAGSHLAGELLAVTTGAKMLHVPYKGDAPAIIDVMGGQLTIALPTALAGVPHVKNGKLR
ALAVTSQKRIASLPDVPTVNEALGISGYEAVSWGGLMVPTGTPAEVIAKINAETNKALQMPDVKVKLMAQGAEIVGGTPE
AFNTFLRAELVKWKHVADVAKVRLD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 36326; Mature: 36195

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSRFPRQYSPTITRRLSMTQYLRRIATALMLIGALCSGQAAIAKDWPTQSIRIVLPYP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECC
PGGASDVTARLLGMKMGQAWETTVVIENRPGANGIIANEAAAKSPADGYTILMANLGPNA
CCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEECCCCCCCCCCCEEEEEEECCCCC
INPAVYAKLPYDTVKDFAPVILTTIVPLVIVTAADSPVKSLAQLIALAKEKPGQITFGSA
CCCCEEEECCHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCEEEECCC
GKGAGSHLAGELLAVTTGAKMLHVPYKGDAPAIIDVMGGQLTIALPTALAGVPHVKNGKL
CCCCCCHHHCCEEEEECCCEEEEECCCCCCCEEEEECCCEEEEEECHHHCCCCCCCCCCE
RALAVTSQKRIASLPDVPTVNEALGISGYEAVSWGGLMVPTGTPAEVIAKINAETNKALQ
EEEEECCHHHHHCCCCCCCCHHHHCCCCCCEECCCCEECCCCCHHHHHEECCCCCCCEEC
MPDVKVKLMAQGAEIVGGTPEAFNTFLRAELVKWKHVADVAKVRLD
CCCCEEEEEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TRSRFPRQYSPTITRRLSMTQYLRRIATALMLIGALCSGQAAIAKDWPTQSIRIVLPYP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECC
PGGASDVTARLLGMKMGQAWETTVVIENRPGANGIIANEAAAKSPADGYTILMANLGPNA
CCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEECCCCCCCCCCCEEEEEEECCCCC
INPAVYAKLPYDTVKDFAPVILTTIVPLVIVTAADSPVKSLAQLIALAKEKPGQITFGSA
CCCCEEEECCHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCEEEECCC
GKGAGSHLAGELLAVTTGAKMLHVPYKGDAPAIIDVMGGQLTIALPTALAGVPHVKNGKL
CCCCCCHHHCCEEEEECCCEEEEECCCCCCCEEEEECCCEEEEEECHHHCCCCCCCCCCE
RALAVTSQKRIASLPDVPTVNEALGISGYEAVSWGGLMVPTGTPAEVIAKINAETNKALQ
EEEEECCHHHHHCCCCCCCCHHHHCCCCCCEECCCCEECCCCCHHHHHEECCCCCCCEEC
MPDVKVKLMAQGAEIVGGTPEAFNTFLRAELVKWKHVADVAKVRLD
CCCCEEEEEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]