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The map label for this gene is yfdE [H]

Identifier: 91788347

GI number: 91788347

Start: 2599603

End: 2600826

Strand: Direct

Name: yfdE [H]

Synonym: Bpro_2484

Alternate gene names: 91788347

Gene position: 2599603-2600826 (Clockwise)

Preceding gene: 91788346

Following gene: 91788348

Centisome position: 49.99

GC content: 60.46

Gene sequence:

>1224_bases
ATGGCAGGACCCTTATCCGGCATCAAGGTACTTGATCTCAGCCGAATCCTCGCGGGCCCGTGGAGCACGCAGCTACTTTC
CGATTTGGGGGCCGATGTGATCAAAGTCGAGCGACCTGTAGGCGGAGACGATACCAGAGGGTGGGGGCCGCCCTTTCTTG
AACGCGAGGATGGTTCGGCAACGGCCGAATCCGCCTATTTTCTCTCTGCCAATCGGGGCAAGCGATCAATCACCGTGGAT
ATCAGTACGCCGGAAGGCCAGGGCATTCTGCGCGAAATGGTAAAGACAGTCGATGTGTTCGTGGAGAACTATAAACTCGG
CGACATGAGGCGCTATGGCCTGGATTACGCCGCTCTCTGCGAGATCAATCCAGGCCTGGTTTACTGCTCGATCACAGGTT
TCGGCCAAACCGGGCCCTACAGCAGCCGAGCGGGCTACGACTTCGTGATCCAGGCCATGGGGGGGCTGATGAGCATCACC
GGGCAGAGTGACGACCAGCCTGGCGGCGGCGCCCAGAAGTGCGGCGTGCCGATCTCCGATCTGATGACCGGCATGTACGC
ATCGGTCGCCATCGTCAGTGCGTTGTTCGAGCGAACCCGCAGCGGCAAGGGCCAATACATCGACATGAGCCTGCTCGACA
CCCAGGTCGCCTGGCTCGCCAATCAGGCGTCCAACTACCTCGTATCGGGAAAGCCACCGAAGCGATGGGGCAATGCGCAT
CCCAATCTCGCCCCCTACCAGTCCTTTGCCGCCAGCGATGGAGAACTGATCGTTGCTGTCGGGAATGACCGCCAATTCGG
CGCGCTGTGCCGCACGCTCGGCGTAGAAGGATTGACCAATGACGAACGGTACGCCACCAACGCCCAGCGGCTGCAGCACC
GCGCAACGCTTATTCCCGCCTTGTCCGAATTGTTCGCCCATGCATGCAAGAGGCACTGGCTCGATCAACTCGAACGCGCG
GGGGTGCCGTGCGGTCCGATCCAGTCTATTCCCGAAGCGCTGACGGACGAGCACGTGCTGGCCCGCGGCATGGTTTTTTC
GCTGCCTCATTCCAGCGGCGCCATGGCGCCGCAAATCGCCAATCCCATCAAGTTTTCTAGAACCAGCATCCGCTATCGAC
GTGCCCCTCCAGCGCTGGGGGAGCACACCGAAGAAATACTGGCCACGGAACTGGGCTGGTCTGCTGAGCAAATTTCCGCC
TCGAAGCAAAAGGGAGCGATTTGA

Upstream 100 bases:

>100_bases
TGCGATGAAGGCTGCCAAGACAGTCTTCGATCCAAAGCAGATCCTGAACCCGGGCGTCCTGTTCGATCCGAGCTGATTGG
TTACACAAAGAAGGCACATC

Downstream 100 bases:

>100_bases
GGCCATGACGAGATCGAGGTTCCCAAGGCAGTATTCACCAACGATTACCAGGAGACTTTCAATGACTCAATATCTTCGCC
GGATTGCGACGGCGCTCATG

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MAGPLSGIKVLDLSRILAGPWSTQLLSDLGADVIKVERPVGGDDTRGWGPPFLEREDGSATAESAYFLSANRGKRSITVD
ISTPEGQGILREMVKTVDVFVENYKLGDMRRYGLDYAALCEINPGLVYCSITGFGQTGPYSSRAGYDFVIQAMGGLMSIT
GQSDDQPGGGAQKCGVPISDLMTGMYASVAIVSALFERTRSGKGQYIDMSLLDTQVAWLANQASNYLVSGKPPKRWGNAH
PNLAPYQSFAASDGELIVAVGNDRQFGALCRTLGVEGLTNDERYATNAQRLQHRATLIPALSELFAHACKRHWLDQLERA
GVPCGPIQSIPEALTDEHVLARGMVFSLPHSSGAMAPQIANPIKFSRTSIRYRRAPPALGEHTEEILATELGWSAEQISA
SKQKGAI

Sequences:

>Translated_407_residues
MAGPLSGIKVLDLSRILAGPWSTQLLSDLGADVIKVERPVGGDDTRGWGPPFLEREDGSATAESAYFLSANRGKRSITVD
ISTPEGQGILREMVKTVDVFVENYKLGDMRRYGLDYAALCEINPGLVYCSITGFGQTGPYSSRAGYDFVIQAMGGLMSIT
GQSDDQPGGGAQKCGVPISDLMTGMYASVAIVSALFERTRSGKGQYIDMSLLDTQVAWLANQASNYLVSGKPPKRWGNAH
PNLAPYQSFAASDGELIVAVGNDRQFGALCRTLGVEGLTNDERYATNAQRLQHRATLIPALSELFAHACKRHWLDQLERA
GVPCGPIQSIPEALTDEHVLARGMVFSLPHSSGAMAPQIANPIKFSRTSIRYRRAPPALGEHTEEILATELGWSAEQISA
SKQKGAI
>Mature_406_residues
AGPLSGIKVLDLSRILAGPWSTQLLSDLGADVIKVERPVGGDDTRGWGPPFLEREDGSATAESAYFLSANRGKRSITVDI
STPEGQGILREMVKTVDVFVENYKLGDMRRYGLDYAALCEINPGLVYCSITGFGQTGPYSSRAGYDFVIQAMGGLMSITG
QSDDQPGGGAQKCGVPISDLMTGMYASVAIVSALFERTRSGKGQYIDMSLLDTQVAWLANQASNYLVSGKPPKRWGNAHP
NLAPYQSFAASDGELIVAVGNDRQFGALCRTLGVEGLTNDERYATNAQRLQHRATLIPALSELFAHACKRHWLDQLERAG
VPCGPIQSIPEALTDEHVLARGMVFSLPHSSGAMAPQIANPIKFSRTSIRYRRAPPALGEHTEEILATELGWSAEQISAS
KQKGAI

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=404, Percent_Identity=43.5643564356436, Blast_Score=350, Evalue=1e-96,
Organism=Homo sapiens, GI300863124, Length=430, Percent_Identity=40.9302325581395, Blast_Score=336, Evalue=2e-92,
Organism=Homo sapiens, GI300863126, Length=404, Percent_Identity=38.6138613861386, Blast_Score=291, Evalue=5e-79,
Organism=Homo sapiens, GI13376042, Length=430, Percent_Identity=37.4418604651163, Blast_Score=288, Evalue=4e-78,
Organism=Homo sapiens, GI42794625, Length=411, Percent_Identity=28.4671532846715, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI266456254, Length=411, Percent_Identity=28.4671532846715, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI266458393, Length=305, Percent_Identity=30.4918032786885, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI266458397, Length=272, Percent_Identity=30.8823529411765, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI266458395, Length=151, Percent_Identity=33.112582781457, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI42822893, Length=151, Percent_Identity=33.112582781457, Blast_Score=86, Evalue=5e-17,
Organism=Escherichia coli, GI87082093, Length=364, Percent_Identity=37.3626373626374, Blast_Score=261, Evalue=5e-71,
Organism=Escherichia coli, GI1788717, Length=429, Percent_Identity=29.6037296037296, Blast_Score=168, Evalue=6e-43,
Organism=Escherichia coli, GI1786222, Length=414, Percent_Identity=23.1884057971014, Blast_Score=85, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI115535051, Length=346, Percent_Identity=26.3005780346821, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI32564160, Length=290, Percent_Identity=27.5862068965517, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24648431, Length=404, Percent_Identity=45.049504950495, Blast_Score=359, Evalue=2e-99,
Organism=Drosophila melanogaster, GI24585488, Length=349, Percent_Identity=25.7879656160458, Blast_Score=114, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 43807; Mature: 43676

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGPLSGIKVLDLSRILAGPWSTQLLSDLGADVIKVERPVGGDDTRGWGPPFLEREDGSA
CCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
TAESAYFLSANRGKRSITVDISTPEGQGILREMVKTVDVFVENYKLGDMRRYGLDYAALC
CCCCEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEE
EINPGLVYCSITGFGQTGPYSSRAGYDFVIQAMGGLMSITGQSDDQPGGGAQKCGVPISD
ECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHH
LMTGMYASVAIVSALFERTRSGKGQYIDMSLLDTQVAWLANQASNYLVSGKPPKRWGNAH
HHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCCEECCCCCHHCCCCC
PNLAPYQSFAASDGELIVAVGNDRQFGALCRTLGVEGLTNDERYATNAQRLQHRATLIPA
CCCCCHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
LSELFAHACKRHWLDQLERAGVPCGPIQSIPEALTDEHVLARGMVFSLPHSSGAMAPQIA
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHC
NPIKFSRTSIRYRRAPPALGEHTEEILATELGWSAEQISASKQKGAI
CCCHHCHHHEEEECCCCCCHHHHHHHHHHHCCCCHHHHHCCHHCCCC
>Mature Secondary Structure 
AGPLSGIKVLDLSRILAGPWSTQLLSDLGADVIKVERPVGGDDTRGWGPPFLEREDGSA
CCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
TAESAYFLSANRGKRSITVDISTPEGQGILREMVKTVDVFVENYKLGDMRRYGLDYAALC
CCCCEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEE
EINPGLVYCSITGFGQTGPYSSRAGYDFVIQAMGGLMSITGQSDDQPGGGAQKCGVPISD
ECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHH
LMTGMYASVAIVSALFERTRSGKGQYIDMSLLDTQVAWLANQASNYLVSGKPPKRWGNAH
HHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCCEECCCCCHHCCCCC
PNLAPYQSFAASDGELIVAVGNDRQFGALCRTLGVEGLTNDERYATNAQRLQHRATLIPA
CCCCCHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
LSELFAHACKRHWLDQLERAGVPCGPIQSIPEALTDEHVLARGMVFSLPHSSGAMAPQIA
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHC
NPIKFSRTSIRYRRAPPALGEHTEEILATELGWSAEQISASKQKGAI
CCCHHCHHHEEEECCCCCCHHHHHHHHHHHCCCCHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]