Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is tap [C]

Identifier: 91788329

GI number: 91788329

Start: 2570180

End: 2571910

Strand: Direct

Name: tap [C]

Synonym: Bpro_2464

Alternate gene names: 91788329

Gene position: 2570180-2571910 (Clockwise)

Preceding gene: 91788328

Following gene: 91788330

Centisome position: 49.42

GC content: 63.32

Gene sequence:

>1731_bases
ATGAAATGGAATGTCGGAACCAAGATGGGTGCAGGGTTTGGCCTGGCGATGGTTTTTTTTGTGATCGTCGGGGCGGTTTC
CTATCGCAGCACAACGCAATTGATCGAGGCATCGGACTTGCGCCAGCACACCTACGAAGTGCTGAGTCGACTCGCGGAGA
TGGAATTGCTGTCGGCAGACATGCAAAATGGCTTGCGGGGCTACGTCATCACCGGGGAAGAAAAATACCTGGAACCGTAT
CAAACTGCGGTGGGAAAAATTGACAAAATCCTCCAGGAAGCCCGGAAATTGACCGAGGACAACCTGCGTGAGCAGCGACG
CCTGGACGCGCTCGAACCGCTCGTCAAAAGTCGGATCGACCTCGCCAGGGAAACGATCGATGCCATACGGACCAAGGGAG
AGGCGGCGGGCGTCGAACTCATCAAGACAGGCAAGGGCCGGACGCTCACGAGTGAAATTCGCAAGGTCATCGACGAGATG
GAGCGCGAAGAAAAGGATTTGCTCAAACAACGCGCGGAGGCCGCGCAAAACGATGCCGACAACGCGAAACAGATCATCGT
GTTGGGCACCCTCGCCGCCCTGGTGTTCGCGGCGCTGGCCGGATTCGTCATCACACGCAACATCGCCCGGCCTCTCCAGG
ACCTCACGGCTGTCGCGGAACGGATCACTTTGGGCGACCTGAGCGTCAATGTGCCGGTTGATGATACCCGCAGCGACGAG
GTGGGAGCGCTGGCACGGACGTTTGATCGCATGGTGCAGTCTCTGCGTGCGATGGCGAGCGCAGCCGAGCAGATCGCCGC
CGGTGATCTGCGCTCGACCATCAAGCCTCAATCCCCCGATGACGTATTGGGCACCGCCTTTGCGCGGATGTCGGAGAGTC
TTCGCGAGCAAATTCGTGGCTTGGCTGAAGGAGCGAACGTGCTGGGCTCGGCCGCCAGTGAAATCGTTGCCTCGACCACC
CAGCTCGCCGCCAGCGCCAGCCAGTCGGCCGCGGCGGTGAGCGAGACCACCACGACGGTCGAAGAGGTTCGGCAAACCGC
GCAGGTGGCCAGCCAGAAGGCCAAGCAGGTGTCCGACAGCGCGCAGAAGGCGGCACAGAGCTCCCAGAGCGGACGCAAGT
CCACCGAGGACGTTGCGGCCGGGATGAATCGCATCCGGCTGCAGATGGAAGCCATTGCCGCCAGCATGGCGCGACTGTCC
GAGCAGAGCCAGGCCATAGGCCGGATCATGGCCACCGTCGAGGACCTCGCTGCGCAATCCAACCTGCTGGCAGTCAACGC
GGCCATCGAGGCCGCCAGGGCCGGCGAGCATGGCAAGGGCTTTGGCGTGGTAGCGCAGGAAGTCAAGAGCCTGGCGGAGC
AGTCGCGCCAGGCGACCAACCAGGTACGCACCATCCTGGGGGACATCCAGAAGGCAACGATTGCGGCGGTGCTGGCGACC
GAGCAAGGCAACAAGGCGGTGGAGGCGGGGAGCCGGCAGAGCGAAGTGGCAGGTGCATCGATCCAGGCGCTGGCTGGCAG
TGTGACGGAGGCGGCGCAGGCGGCCACGCAGATCGCGGCGTCGAGCCAGCAGCAACTGGTGGGGGTGGACCAGGTGGCCG
GCGCGATGGAGAGCATCAGGCAGGCGAGCACGCAGAACGTAGCCGGCGCCAGGCAGTTGGAGGTTGCGGCGCGCAACCTG
GACGAACTCGGCCAGCGGCTCAAGCAGATGGTCGCGCTCTACACGGTGTGA

Upstream 100 bases:

>100_bases
TCCGCGCGACCTTCCAGGTCAAAGCCACGGAGCATGAGCAGGCGATCGCAGCAGGTTTTCAGCCACGTGGAAAGCCGAAA
AAAAAATGGAGGTCGGTGCC

Downstream 100 bases:

>100_bases
GCGCGCAAGAGGAATCCCATGCAGGGAGGCGCTGCTTATAGAACTGGACTGTCGGGACGAAGGGCGCCGAGAGGGCTGCG
TGCAAGCTGCACCAGTTGGG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 576; Mature: 576

Protein sequence:

>576_residues
MKWNVGTKMGAGFGLAMVFFVIVGAVSYRSTTQLIEASDLRQHTYEVLSRLAEMELLSADMQNGLRGYVITGEEKYLEPY
QTAVGKIDKILQEARKLTEDNLREQRRLDALEPLVKSRIDLARETIDAIRTKGEAAGVELIKTGKGRTLTSEIRKVIDEM
EREEKDLLKQRAEAAQNDADNAKQIIVLGTLAALVFAALAGFVITRNIARPLQDLTAVAERITLGDLSVNVPVDDTRSDE
VGALARTFDRMVQSLRAMASAAEQIAAGDLRSTIKPQSPDDVLGTAFARMSESLREQIRGLAEGANVLGSAASEIVASTT
QLAASASQSAAAVSETTTTVEEVRQTAQVASQKAKQVSDSAQKAAQSSQSGRKSTEDVAAGMNRIRLQMEAIAASMARLS
EQSQAIGRIMATVEDLAAQSNLLAVNAAIEAARAGEHGKGFGVVAQEVKSLAEQSRQATNQVRTILGDIQKATIAAVLAT
EQGNKAVEAGSRQSEVAGASIQALAGSVTEAAQAATQIAASSQQQLVGVDQVAGAMESIRQASTQNVAGARQLEVAARNL
DELGQRLKQMVALYTV

Sequences:

>Translated_576_residues
MKWNVGTKMGAGFGLAMVFFVIVGAVSYRSTTQLIEASDLRQHTYEVLSRLAEMELLSADMQNGLRGYVITGEEKYLEPY
QTAVGKIDKILQEARKLTEDNLREQRRLDALEPLVKSRIDLARETIDAIRTKGEAAGVELIKTGKGRTLTSEIRKVIDEM
EREEKDLLKQRAEAAQNDADNAKQIIVLGTLAALVFAALAGFVITRNIARPLQDLTAVAERITLGDLSVNVPVDDTRSDE
VGALARTFDRMVQSLRAMASAAEQIAAGDLRSTIKPQSPDDVLGTAFARMSESLREQIRGLAEGANVLGSAASEIVASTT
QLAASASQSAAAVSETTTTVEEVRQTAQVASQKAKQVSDSAQKAAQSSQSGRKSTEDVAAGMNRIRLQMEAIAASMARLS
EQSQAIGRIMATVEDLAAQSNLLAVNAAIEAARAGEHGKGFGVVAQEVKSLAEQSRQATNQVRTILGDIQKATIAAVLAT
EQGNKAVEAGSRQSEVAGASIQALAGSVTEAAQAATQIAASSQQQLVGVDQVAGAMESIRQASTQNVAGARQLEVAARNL
DELGQRLKQMVALYTV
>Mature_576_residues
MKWNVGTKMGAGFGLAMVFFVIVGAVSYRSTTQLIEASDLRQHTYEVLSRLAEMELLSADMQNGLRGYVITGEEKYLEPY
QTAVGKIDKILQEARKLTEDNLREQRRLDALEPLVKSRIDLARETIDAIRTKGEAAGVELIKTGKGRTLTSEIRKVIDEM
EREEKDLLKQRAEAAQNDADNAKQIIVLGTLAALVFAALAGFVITRNIARPLQDLTAVAERITLGDLSVNVPVDDTRSDE
VGALARTFDRMVQSLRAMASAAEQIAAGDLRSTIKPQSPDDVLGTAFARMSESLREQIRGLAEGANVLGSAASEIVASTT
QLAASASQSAAAVSETTTTVEEVRQTAQVASQKAKQVSDSAQKAAQSSQSGRKSTEDVAAGMNRIRLQMEAIAASMARLS
EQSQAIGRIMATVEDLAAQSNLLAVNAAIEAARAGEHGKGFGVVAQEVKSLAEQSRQATNQVRTILGDIQKATIAAVLAT
EQGNKAVEAGSRQSEVAGASIQALAGSVTEAAQAATQIAASSQQQLVGVDQVAGAMESIRQASTQNVAGARQLEVAARNL
DELGQRLKQMVALYTV

Specific function: May bind attractants or detect changes in the extracellular concentration of soluble sugars [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=336, Percent_Identity=29.4642857142857, Blast_Score=125, Evalue=9e-30,
Organism=Escherichia coli, GI2367378, Length=341, Percent_Identity=31.3782991202346, Blast_Score=125, Evalue=1e-29,
Organism=Escherichia coli, GI1788195, Length=285, Percent_Identity=30.5263157894737, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI1787690, Length=537, Percent_Identity=24.5810055865922, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1789453, Length=361, Percent_Identity=24.9307479224377, Blast_Score=92, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 61234; Mature: 61234

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWNVGTKMGAGFGLAMVFFVIVGAVSYRSTTQLIEASDLRQHTYEVLSRLAEMELLSAD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQNGLRGYVITGEEKYLEPYQTAVGKIDKILQEARKLTEDNLREQRRLDALEPLVKSRID
HHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LARETIDAIRTKGEAAGVELIKTGKGRTLTSEIRKVIDEMEREEKDLLKQRAEAAQNDAD
HHHHHHHHHHHCCCHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NAKQIIVLGTLAALVFAALAGFVITRNIARPLQDLTAVAERITLGDLSVNVPVDDTRSDE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCH
VGALARTFDRMVQSLRAMASAAEQIAAGDLRSTIKPQSPDDVLGTAFARMSESLREQIRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LAEGANVLGSAASEIVASTTQLAASASQSAAAVSETTTTVEEVRQTAQVASQKAKQVSDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQKAAQSSQSGRKSTEDVAAGMNRIRLQMEAIAASMARLSEQSQAIGRIMATVEDLAAQS
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NLLAVNAAIEAARAGEHGKGFGVVAQEVKSLAEQSRQATNQVRTILGDIQKATIAAVLAT
CCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQGNKAVEAGSRQSEVAGASIQALAGSVTEAAQAATQIAASSQQQLVGVDQVAGAMESIR
CCCCHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QASTQNVAGARQLEVAARNLDELGQRLKQMVALYTV
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKWNVGTKMGAGFGLAMVFFVIVGAVSYRSTTQLIEASDLRQHTYEVLSRLAEMELLSAD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQNGLRGYVITGEEKYLEPYQTAVGKIDKILQEARKLTEDNLREQRRLDALEPLVKSRID
HHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LARETIDAIRTKGEAAGVELIKTGKGRTLTSEIRKVIDEMEREEKDLLKQRAEAAQNDAD
HHHHHHHHHHHCCCHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NAKQIIVLGTLAALVFAALAGFVITRNIARPLQDLTAVAERITLGDLSVNVPVDDTRSDE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCH
VGALARTFDRMVQSLRAMASAAEQIAAGDLRSTIKPQSPDDVLGTAFARMSESLREQIRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LAEGANVLGSAASEIVASTTQLAASASQSAAAVSETTTTVEEVRQTAQVASQKAKQVSDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQKAAQSSQSGRKSTEDVAAGMNRIRLQMEAIAASMARLSEQSQAIGRIMATVEDLAAQS
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NLLAVNAAIEAARAGEHGKGFGVVAQEVKSLAEQSRQATNQVRTILGDIQKATIAAVLAT
CCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQGNKAVEAGSRQSEVAGASIQALAGSVTEAAQAATQIAASSQQQLVGVDQVAGAMESIR
CCCCHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QASTQNVAGARQLEVAARNLDELGQRLKQMVALYTV
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8436949 [H]