| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is quiP [H]
Identifier: 91788317
GI number: 91788317
Start: 2555116
End: 2557785
Strand: Direct
Name: quiP [H]
Synonym: Bpro_2452
Alternate gene names: 91788317
Gene position: 2555116-2557785 (Clockwise)
Preceding gene: 91788316
Following gene: 91788320
Centisome position: 49.13
GC content: 62.51
Gene sequence:
>2670_bases TTGAATCCAGACCCTGGCCCCCTGGCCGCCGACGAGGCTCAGGACTGTCAGCGGCAACACCTTATCCTTCAGCGGGCACC AACCTTGATCCGGTTCAGACTTGTTTTTGCGGCGTTGTCCCGGTTATTGATGGTGGCGCTTGTGCTGCTCCTTGCTGCCG CAGGGTTTTATGTCTACCGGGCTTTTCCTGATCTGGATGGTGAGTTGCAGGTCCCTGGCCTGGGTAGCCGGGTGACTGTG ACGCGGGACCATGCCGATGTAACGCACATACGGGCCCAGTCGCCGCGAGACGCGTGGTTCTCGCTGGGCTACGTGCATGC CCAGGAGCGGGGCTGGCAGATGGAGTTCAACCGCCGACTGATACATGGCGAGCTGTCGGAAGTGTTTGGCCCTTCAACCC TGCACACCGACAAGCTGATGCGCACGCTGGGGATTGTGCGGGCGGCCGAGCGGCAATGGCAAAGCCTGCCGGAAGAGGGA CGCATTGCGCTGCAGTCTTACAGCGACGGCGCCAATGCTTTTTATGCGAGCTCATCACAGGCACTCTCACCCGAATTCCA CATGCTCGGCGTCAACCCCGGGGGGACTTCCGGCAAGGCGTGGTCGCCGATAGACAGCTTGGGCTGGTCGCTGATGATGG CCCTCGACCTGGGTGGCAACTGGGGAACCGAGTTCGCGCGTCTTGCCGCCGCCAGGGTGTTGGACACCCGCCAGCTGTGG GAGCTATTCCCCCCTTATCCCGGGGAGCAACCGGCCTCCCGGGTTGATTTCGCCAGACTTTATGCCGGCTTGGGGGTGTA CCGCACGGGTGCAACGGATGCTCCTAAAACAATAGCACCCCCTGTCCGTGTTTCTGGTGCTGGATCAATTTTTGATACTG AACTCACCGTAAAAAAGGTGCTCGCCTTATCCGCCTTATCGTCAGGCATCAATGACTGGGCTGATGCGTTGGGTCAGGTG GATGGCAAGGGCTCCAACAACTGGGTGGTGGCGGGCAAACACAGCACGAGCGGCCAGCCGCTGCTCGCCAATGATCCTCA TTTGGGGTTGTCGGCGCCGGCCACCTGGTACTTTGCACGGTTGCACGCGCCGGACGATCAGGCCACGCCTGCGCTCGATG CGCTGGACGTCATGGGCGCCACCTTGCCCGGCTTGCCGTTCGTGGTGCTGGGCCGCACCAGCAAGGTGGCCTGGGGCTTT ACCAACACGGCGCCGGACGTGCAGGATTTGTATCTGGAGCAGCTCAACCCGGCCAATCCGCAGCAATACAGAGTGCCTGG CACGGGCGATGCCGGTAGCGCAGCGCGATGGGCGGACTTCACCGTCCGTGAAGAGACTATCCGGATCAAAGGAGAGCCGG ATCTGCATTTGATGGTGCGGGAAAGCCGCCATGGCCCCGTGCTCAGCGATGTTCAAAAGTCGCATGCCGACCTTGTTGAC ACCCGCAAATACGTGATTGCACTGCGCTGGAGCGCCCTCGACGCAGACAACCAGACCGTACTTGCGGGATTGCGGGCGAA CCGGGCGCAGTCGGTTGATGAGCTGATTGCGGCGTATTCGGCCTACCACGCCCCCATGCAAAACATGGTGGCGGCCGATG TGGCGGGCCGTACAGCCTTCAAGGCCATCGGCAAGGTGCCGCTGCGCAAGCCCGACAACGACATTCTGGGAATAGCGCCT TCGCCAGGATGGGATGCCCGCTACGACTGGGCCGGTTGGGTGCCTTACGCACAAACACCTCAAACCGACCATGCCGCCAT TGCCGCCAAAGGCTGGCTGTCCACGGCCAACCAGCGCATCACCCCGCCGGGCTATCCCATCTTTATGGGGCAGGACTGGA CCGTCCCCTACCGCCATGACCGCATTGAGCAGTTGCTCGCCGCTACACCGAGACACGACATGGATTCGATGCAGAACATC CAGGCTGACCAGTTCTCGGCAGCTACGGTTCGGCTGCTGCCCTTCATTCAGAAGTCGCTGTCGCAACCTTCTGCACACCC CTTGGCGGACGCCGCCCGGCGTGCCATGGACGGCTTTGACGGCATCATGCGGGCCGACAAGGCGGCGCCGCTCATTTTTG CGGCGTGGGCAGACGAACTCACGCGGGGCGTGATTGGCGGAAGGCTCGGCGAGAGGCCATTCGCAGCGCTCTATGGCAAG CGCCACTTCAGAAATACCCTGGAGAGCATCCTGGAAAGCAGTGACCCCGGCTGGTGCGGCAACGCCGGGTGTACGGCGCA ATCCGCCGCCGCGCTTGACCGGGCGCTAACCCGGCTGCAGGCCGCTTATGGCGCCGACGTCAGCCGGTGGGCGTGGGGCA GGGCACACTACGCGCTGTCAGCGCACAAGCCCTTCGGCAACGTACCGTGGTTGGCGCAGTTTTTCGACGTGCGGGTTCCC ACAGGCGGTGACACCTTCACGGTCAATGTGGGTCAGTACTGGGCCAACGGCGACAAAATGCCTTTTGCCAACCGGCAGGC CGCGTCGCTGCGGGCCGTCTACGACCTGGCAAATCTGGAAAACTCCCGGTTCATCTACCAGACGGGTCAGAGTGGGCTGG TGTTTTCCAGCCGTTATCGCGATATGCGCGACAGCTGGGCGCGGGTAGAGTACCGACCGTTGCAAATGAACCCGGCAGGG TTCGCGCACCAGTTGACCCTACAACCCTGA
Upstream 100 bases:
>100_bases CGGTCCGTTTCAAATTCTCTGCCGATCGGCCGGGGGCTTAAAGACCATCAGATCCGCAGGTCTGACCGGGCGTCCGGCGT ATCCTTGGGACATAGCGGAA
Downstream 100 bases:
>100_bases GACCCTGAGGTTCGCTACGCGGGCAACGTACCGAGCCTGCATATCCATGACTGCATGGTCAGGCCGGAATGGCGTCAATG TTGAGGCGGTCCCAGTGGCG
Product: penicillin amidase
Products: NA
Alternate protein names: AHL acylase quiP; Acyl-HSL acylase quiP; Quorum signal utilization and inactivation protein; Acyl-HSL acylase quiP subunit alpha; Acyl-HSL acylase quiP subunit beta [H]
Number of amino acids: Translated: 889; Mature: 889
Protein sequence:
>889_residues MNPDPGPLAADEAQDCQRQHLILQRAPTLIRFRLVFAALSRLLMVALVLLLAAAGFYVYRAFPDLDGELQVPGLGSRVTV TRDHADVTHIRAQSPRDAWFSLGYVHAQERGWQMEFNRRLIHGELSEVFGPSTLHTDKLMRTLGIVRAAERQWQSLPEEG RIALQSYSDGANAFYASSSQALSPEFHMLGVNPGGTSGKAWSPIDSLGWSLMMALDLGGNWGTEFARLAAARVLDTRQLW ELFPPYPGEQPASRVDFARLYAGLGVYRTGATDAPKTIAPPVRVSGAGSIFDTELTVKKVLALSALSSGINDWADALGQV DGKGSNNWVVAGKHSTSGQPLLANDPHLGLSAPATWYFARLHAPDDQATPALDALDVMGATLPGLPFVVLGRTSKVAWGF TNTAPDVQDLYLEQLNPANPQQYRVPGTGDAGSAARWADFTVREETIRIKGEPDLHLMVRESRHGPVLSDVQKSHADLVD TRKYVIALRWSALDADNQTVLAGLRANRAQSVDELIAAYSAYHAPMQNMVAADVAGRTAFKAIGKVPLRKPDNDILGIAP SPGWDARYDWAGWVPYAQTPQTDHAAIAAKGWLSTANQRITPPGYPIFMGQDWTVPYRHDRIEQLLAATPRHDMDSMQNI QADQFSAATVRLLPFIQKSLSQPSAHPLADAARRAMDGFDGIMRADKAAPLIFAAWADELTRGVIGGRLGERPFAALYGK RHFRNTLESILESSDPGWCGNAGCTAQSAAALDRALTRLQAAYGADVSRWAWGRAHYALSAHKPFGNVPWLAQFFDVRVP TGGDTFTVNVGQYWANGDKMPFANRQAASLRAVYDLANLENSRFIYQTGQSGLVFSSRYRDMRDSWARVEYRPLQMNPAG FAHQLTLQP
Sequences:
>Translated_889_residues MNPDPGPLAADEAQDCQRQHLILQRAPTLIRFRLVFAALSRLLMVALVLLLAAAGFYVYRAFPDLDGELQVPGLGSRVTV TRDHADVTHIRAQSPRDAWFSLGYVHAQERGWQMEFNRRLIHGELSEVFGPSTLHTDKLMRTLGIVRAAERQWQSLPEEG RIALQSYSDGANAFYASSSQALSPEFHMLGVNPGGTSGKAWSPIDSLGWSLMMALDLGGNWGTEFARLAAARVLDTRQLW ELFPPYPGEQPASRVDFARLYAGLGVYRTGATDAPKTIAPPVRVSGAGSIFDTELTVKKVLALSALSSGINDWADALGQV DGKGSNNWVVAGKHSTSGQPLLANDPHLGLSAPATWYFARLHAPDDQATPALDALDVMGATLPGLPFVVLGRTSKVAWGF TNTAPDVQDLYLEQLNPANPQQYRVPGTGDAGSAARWADFTVREETIRIKGEPDLHLMVRESRHGPVLSDVQKSHADLVD TRKYVIALRWSALDADNQTVLAGLRANRAQSVDELIAAYSAYHAPMQNMVAADVAGRTAFKAIGKVPLRKPDNDILGIAP SPGWDARYDWAGWVPYAQTPQTDHAAIAAKGWLSTANQRITPPGYPIFMGQDWTVPYRHDRIEQLLAATPRHDMDSMQNI QADQFSAATVRLLPFIQKSLSQPSAHPLADAARRAMDGFDGIMRADKAAPLIFAAWADELTRGVIGGRLGERPFAALYGK RHFRNTLESILESSDPGWCGNAGCTAQSAAALDRALTRLQAAYGADVSRWAWGRAHYALSAHKPFGNVPWLAQFFDVRVP TGGDTFTVNVGQYWANGDKMPFANRQAASLRAVYDLANLENSRFIYQTGQSGLVFSSRYRDMRDSWARVEYRPLQMNPAG FAHQLTLQP >Mature_889_residues MNPDPGPLAADEAQDCQRQHLILQRAPTLIRFRLVFAALSRLLMVALVLLLAAAGFYVYRAFPDLDGELQVPGLGSRVTV TRDHADVTHIRAQSPRDAWFSLGYVHAQERGWQMEFNRRLIHGELSEVFGPSTLHTDKLMRTLGIVRAAERQWQSLPEEG RIALQSYSDGANAFYASSSQALSPEFHMLGVNPGGTSGKAWSPIDSLGWSLMMALDLGGNWGTEFARLAAARVLDTRQLW ELFPPYPGEQPASRVDFARLYAGLGVYRTGATDAPKTIAPPVRVSGAGSIFDTELTVKKVLALSALSSGINDWADALGQV DGKGSNNWVVAGKHSTSGQPLLANDPHLGLSAPATWYFARLHAPDDQATPALDALDVMGATLPGLPFVVLGRTSKVAWGF TNTAPDVQDLYLEQLNPANPQQYRVPGTGDAGSAARWADFTVREETIRIKGEPDLHLMVRESRHGPVLSDVQKSHADLVD TRKYVIALRWSALDADNQTVLAGLRANRAQSVDELIAAYSAYHAPMQNMVAADVAGRTAFKAIGKVPLRKPDNDILGIAP SPGWDARYDWAGWVPYAQTPQTDHAAIAAKGWLSTANQRITPPGYPIFMGQDWTVPYRHDRIEQLLAATPRHDMDSMQNI QADQFSAATVRLLPFIQKSLSQPSAHPLADAARRAMDGFDGIMRADKAAPLIFAAWADELTRGVIGGRLGERPFAALYGK RHFRNTLESILESSDPGWCGNAGCTAQSAAALDRALTRLQAAYGADVSRWAWGRAHYALSAHKPFGNVPWLAQFFDVRVP TGGDTFTVNVGQYWANGDKMPFANRQAASLRAVYDLANLENSRFIYQTGQSGLVFSSRYRDMRDSWARVEYRPLQMNPAG FAHQLTLQP
Specific function: Catalyzes the deacylation of acyl-homoserine lactone (AHL or acyl-HSL), releasing homoserine lactone (HSL) and the corresponding fatty acid. Possesses a specificity for the degradation of long-chain acyl-HSLs (side chains of seven or more carbons in lengt
COG id: COG2366
COG function: function code R; Protein related to penicillin acylase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S45 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014395 - InterPro: IPR002692 [H]
Pfam domain/function: PF01804 Penicil_amidase [H]
EC number: =3.5.1.97 [H]
Molecular weight: Translated: 97350; Mature: 97350
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPDPGPLAADEAQDCQRQHLILQRAPTLIRFRLVFAALSRLLMVALVLLLAAAGFYVYR CCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE AFPDLDGELQVPGLGSRVTVTRDHADVTHIRAQSPRDAWFSLGYVHAQERGWQMEFNRRL ECCCCCCCEECCCCCCEEEEEECCCCHHHEECCCCCHHHHEECEEEECCCCCEEHHCCHH IHGELSEVFGPSTLHTDKLMRTLGIVRAAERQWQSLPEEGRIALQSYSDGANAFYASSSQ HHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCCC ALSPEFHMLGVNPGGTSGKAWSPIDSLGWSLMMALDLGGNWGTEFARLAAARVLDTRQLW CCCCCEEEEECCCCCCCCCCCCCHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH ELFPPYPGEQPASRVDFARLYAGLGVYRTGATDAPKTIAPPVRVSGAGSIFDTELTVKKV HHCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEECCCCCEEECHHHHHHH LALSALSSGINDWADALGQVDGKGSNNWVVAGKHSTSGQPLLANDPHLGLSAPATWYFAR HHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCCEEEEEE LHAPDDQATPALDALDVMGATLPGLPFVVLGRTSKVAWGFTNTAPDVQDLYLEQLNPANP EECCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHCCCCCC QQYRVPGTGDAGSAARWADFTVREETIRIKGEPDLHLMVRESRHGPVLSDVQKSHADLVD CEEECCCCCCCCCCCCHHCEEEEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHH TRKYVIALRWSALDADNQTVLAGLRANRAQSVDELIAAYSAYHAPMQNMVAADVAGRTAF CCEEEEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KAIGKVPLRKPDNDILGIAPSPGWDARYDWAGWVPYAQTPQTDHAAIAAKGWLSTANQRI HHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHEEHHHHHHCCCCCC TPPGYPIFMGQDWTVPYRHDRIEQLLAATPRHDMDSMQNIQADQFSAATVRLLPFIQKSL CCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH SQPSAHPLADAARRAMDGFDGIMRADKAAPLIFAAWADELTRGVIGGRLGERPFAALYGK CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCCCHHHHHHH RHFRNTLESILESSDPGWCGNAGCTAQSAAALDRALTRLQAAYGADVSRWAWGRAHYALS HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEE AHKPFGNVPWLAQFFDVRVPTGGDTFTVNVGQYWANGDKMPFANRQAASLRAVYDLANLE CCCCCCCCCHHHHHHEEECCCCCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHCCC NSRFIYQTGQSGLVFSSRYRDMRDSWARVEYRPLQMNPAGFAHQLTLQP CCEEEEEECCCCCEEHHHHHHHHHHHHHCEEEEEEECCCCCEEEEEECC >Mature Secondary Structure MNPDPGPLAADEAQDCQRQHLILQRAPTLIRFRLVFAALSRLLMVALVLLLAAAGFYVYR CCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE AFPDLDGELQVPGLGSRVTVTRDHADVTHIRAQSPRDAWFSLGYVHAQERGWQMEFNRRL ECCCCCCCEECCCCCCEEEEEECCCCHHHEECCCCCHHHHEECEEEECCCCCEEHHCCHH IHGELSEVFGPSTLHTDKLMRTLGIVRAAERQWQSLPEEGRIALQSYSDGANAFYASSSQ HHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCCC ALSPEFHMLGVNPGGTSGKAWSPIDSLGWSLMMALDLGGNWGTEFARLAAARVLDTRQLW CCCCCEEEEECCCCCCCCCCCCCHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH ELFPPYPGEQPASRVDFARLYAGLGVYRTGATDAPKTIAPPVRVSGAGSIFDTELTVKKV HHCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEECCCCCEEECHHHHHHH LALSALSSGINDWADALGQVDGKGSNNWVVAGKHSTSGQPLLANDPHLGLSAPATWYFAR HHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCCEEEEEE LHAPDDQATPALDALDVMGATLPGLPFVVLGRTSKVAWGFTNTAPDVQDLYLEQLNPANP EECCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHCCCCCC QQYRVPGTGDAGSAARWADFTVREETIRIKGEPDLHLMVRESRHGPVLSDVQKSHADLVD CEEECCCCCCCCCCCCHHCEEEEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHH TRKYVIALRWSALDADNQTVLAGLRANRAQSVDELIAAYSAYHAPMQNMVAADVAGRTAF CCEEEEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KAIGKVPLRKPDNDILGIAPSPGWDARYDWAGWVPYAQTPQTDHAAIAAKGWLSTANQRI HHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHEEHHHHHHCCCCCC TPPGYPIFMGQDWTVPYRHDRIEQLLAATPRHDMDSMQNIQADQFSAATVRLLPFIQKSL CCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH SQPSAHPLADAARRAMDGFDGIMRADKAAPLIFAAWADELTRGVIGGRLGERPFAALYGK CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCCCHHHHHHH RHFRNTLESILESSDPGWCGNAGCTAQSAAALDRALTRLQAAYGADVSRWAWGRAHYALS HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEE AHKPFGNVPWLAQFFDVRVPTGGDTFTVNVGQYWANGDKMPFANRQAASLRAVYDLANLE CCCCCCCCCHHHHHHEEECCCCCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHCCC NSRFIYQTGQSGLVFSSRYRDMRDSWARVEYRPLQMNPAGFAHQLTLQP CCEEEEEECCCCCEEHHHHHHHHHHHHHCEEEEEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]