| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is cya3 [H]
Identifier: 91788316
GI number: 91788316
Start: 2554130
End: 2555056
Strand: Direct
Name: cya3 [H]
Synonym: Bpro_2451
Alternate gene names: 91788316
Gene position: 2554130-2555056 (Clockwise)
Preceding gene: 91788315
Following gene: 91788317
Centisome position: 49.12
GC content: 58.79
Gene sequence:
>927_bases ATGGCAGAAGTCACCGTCGTTTTTGCCGATCTCGCAGGAAGCACTGGAGTTTTCGAATCACTGGGTAATGAAAAAGCTAC CCGCGCCATTACGCGCCTGACTCACTGGATCGGCAAGGTCTGTAATGCCCACAGTGGGCGCGTCGTGAAATACCTCGGTG ATGGCGTACTCATCGTGTTTCCCGAGAACAATGACGCAATTGAGGCCGTCACAGAACTGCAGCGGGTGCACCGGGAACGC ATTCGTAACTGGCCTGAACTGCTCAAAATGCGGCTTCAGGTTGGTATGGCACGCGGCGAAATCGTGGAGCAGGACGGCGA CTGCTTTGGCGATGCGGTCAATGTGGCCTCCCGGCTCAGTGATTTGTCCGGCCCGGGCCAGATTTTTGCCACCGAGACGG TCATCAGCCAGCTGGTGCCGGGCAGCACCGTGCGGTCCCGTAACCTGGGCGCCATGGAGATCCGGGGACGCAGCCAGGCT TGCGCGGTGCATCGGATCGAATGGCAAAACGAATTGCTGTCCGAGTTTTTTACCGTGGCAGACAATCTGGGCCCCCCTCC TGTTGCCGAGCCGGTTGCTCCCGCGGGTGCCATCGAGCTGTCCTGGAAGCAGGCGAATTCAACTTTTAGCTCGACACAGT TGCCAATTTTTATCGGCCGCGATCTTGAAGCGCAATTTGTCGTGCCGGATCCGCGGGTGTCCCGCATGCACGCCAAAATC GAGTGGCGGGCCGGCAAGTTTTATCTTGAGGATTTCAGCAGCTACGGAACCTGGGTACGGTTCACCGACAGCGCGGCTGC CGTGTCCCTGCGCCGGCAGGAATGCGCGTTGCTGGTCGACGGTGAAATTGCGTTGGGTGCGTCTTTCGAAGATGCCACGA TTCCCTCGGTCCGTTTCAAATTCTCTGCCGATCGGCCGGGGGCTTAA
Upstream 100 bases:
>100_bases AATGGGAGCACGGTTACTTTCAGTTGTGCCTATTTGTAATTTCGAGCTGTGTGCGTATGATTGAGTAACTCAAAACAACT ACAAAAACACCAAAAAATCT
Downstream 100 bases:
>100_bases AGACCATCAGATCCGCAGGTCTGACCGGGCGTCCGGCGTATCCTTGGGACATAGCGGAATTGAATCCAGACCCTGGCCCC CTGGCCGCCGACGAGGCTCA
Product: putative adenylate/guanylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MAEVTVVFADLAGSTGVFESLGNEKATRAITRLTHWIGKVCNAHSGRVVKYLGDGVLIVFPENNDAIEAVTELQRVHRER IRNWPELLKMRLQVGMARGEIVEQDGDCFGDAVNVASRLSDLSGPGQIFATETVISQLVPGSTVRSRNLGAMEIRGRSQA CAVHRIEWQNELLSEFFTVADNLGPPPVAEPVAPAGAIELSWKQANSTFSSTQLPIFIGRDLEAQFVVPDPRVSRMHAKI EWRAGKFYLEDFSSYGTWVRFTDSAAAVSLRRQECALLVDGEIALGASFEDATIPSVRFKFSADRPGA
Sequences:
>Translated_308_residues MAEVTVVFADLAGSTGVFESLGNEKATRAITRLTHWIGKVCNAHSGRVVKYLGDGVLIVFPENNDAIEAVTELQRVHRER IRNWPELLKMRLQVGMARGEIVEQDGDCFGDAVNVASRLSDLSGPGQIFATETVISQLVPGSTVRSRNLGAMEIRGRSQA CAVHRIEWQNELLSEFFTVADNLGPPPVAEPVAPAGAIELSWKQANSTFSSTQLPIFIGRDLEAQFVVPDPRVSRMHAKI EWRAGKFYLEDFSSYGTWVRFTDSAAAVSLRRQECALLVDGEIALGASFEDATIPSVRFKFSADRPGA >Mature_307_residues AEVTVVFADLAGSTGVFESLGNEKATRAITRLTHWIGKVCNAHSGRVVKYLGDGVLIVFPENNDAIEAVTELQRVHRERI RNWPELLKMRLQVGMARGEIVEQDGDCFGDAVNVASRLSDLSGPGQIFATETVISQLVPGSTVRSRNLGAMEIRGRSQAC AVHRIEWQNELLSEFFTVADNLGPPPVAEPVAPAGAIELSWKQANSTFSSTQLPIFIGRDLEAQFVVPDPRVSRMHAKIE WRAGKFYLEDFSSYGTWVRFTDSAAAVSLRRQECALLVDGEIALGASFEDATIPSVRFKFSADRPGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 33750; Mature: 33618
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS50006 FHA_DOMAIN ; PS50887 GGDEF ; PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEVTVVFADLAGSTGVFESLGNEKATRAITRLTHWIGKVCNAHSGRVVKYLGDGVLIVF CCEEEEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEE PENNDAIEAVTELQRVHRERIRNWPELLKMRLQVGMARGEIVEQDGDCFGDAVNVASRLS ECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHH DLSGPGQIFATETVISQLVPGSTVRSRNLGAMEIRGRSQACAVHRIEWQNELLSEFFTVA HCCCCCCEEEHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHEEHHHHHHHHHHHHHHHH DNLGPPPVAEPVAPAGAIELSWKQANSTFSSTQLPIFIGRDLEAQFVVPDPRVSRMHAKI HCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCEEEECCCCCHHHEEEEE EWRAGKFYLEDFSSYGTWVRFTDSAAAVSLRRQECALLVDGEIALGASFEDATIPSVRFK EEECCEEEEHHHHCCCCEEEEECCHHHHHHHHCCCEEEECCCEEECCCCCCCCCCCEEEE FSADRPGA ECCCCCCC >Mature Secondary Structure AEVTVVFADLAGSTGVFESLGNEKATRAITRLTHWIGKVCNAHSGRVVKYLGDGVLIVF CEEEEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEE PENNDAIEAVTELQRVHRERIRNWPELLKMRLQVGMARGEIVEQDGDCFGDAVNVASRLS ECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHH DLSGPGQIFATETVISQLVPGSTVRSRNLGAMEIRGRSQACAVHRIEWQNELLSEFFTVA HCCCCCCEEEHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHEEHHHHHHHHHHHHHHHH DNLGPPPVAEPVAPAGAIELSWKQANSTFSSTQLPIFIGRDLEAQFVVPDPRVSRMHAKI HCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCEEEECCCCCHHHEEEEE EWRAGKFYLEDFSSYGTWVRFTDSAAAVSLRRQECALLVDGEIALGASFEDATIPSVRFK EEECCEEEEHHHHCCCCEEEEECCHHHHHHHHCCCEEEECCCEEECCCCCCCCCCCEEEE FSADRPGA ECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10485295; 11481432 [H]