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The map label for this gene is rimP

Identifier: 91788289

GI number: 91788289

Start: 2524687

End: 2525289

Strand: Direct

Name: rimP

Synonym: Bpro_2424

Alternate gene names: 91788289

Gene position: 2524687-2525289 (Clockwise)

Preceding gene: 91788288

Following gene: 91788290

Centisome position: 48.55

GC content: 57.21

Gene sequence:

>603_bases
ATGGCCTTGCAAGAAACGATTGAGCAGACTGTCACGGGACTGGGTTACGAGCTGGTGGAAATCGAGCGTACCGGCGGTGG
CTTGCTGCGTGTCACGATTGACATGCCCTACGTTTCCGGTGCTGAGCAGTTCATCAATGCGGAAGACTGTGAGAAGGTCA
CGCGCCAGCTACAGTTTGTGCTGGAAGTCGAAGGTGCCGATTATTCGCGGCTGGAAGTCAGCTCGCCGGGTATTGACAGG
CCTCTGCGCAACGAAAAAGATTTTGAGCGTTTTGCCGGTGAATTGGTTGACATCACCCTCAAAGCGCCGATTGGTGTGGC
TGCCAGCGCCGGTTCGGCCGTGTCGGCCAACCGCAAGAAATTCCGCGGCACGCTGGAGCGGGCTGCGCCCAAGGATGGCG
TTGCCGGCTGGCAGATCGTATGGAGCGACGAGCCCCCCGTCAAACCGGGCCAGAAAGTCAGCAAAAAGAAACTTCCCGCA
CCCCTGCAGGCGCTGGGTTTCACACTCGACGAAATTCACCAGGCGCGACTGGCGCCAGTGGTTGATTTCAAGGGCCGAAA
ACCCAAAATTGTCCCTGGTGCGGATAAATCTTCAGAGAAATAA

Upstream 100 bases:

>100_bases
TGTCCGAGTTACAATATGCGCTTCACGACCAAATGGGCGGGTTTTCACCGCCCATTTTTTTTGGGCGTTTGTTTTTACAG
ACTGGTTTTAAGACAACTGA

Downstream 100 bases:

>100_bases
TTTAGAAAGGCAGGCTTGTGAAATGAATCGCGAACTGTTGATGTTGGTTGATGCCATCTCGCGTGAGAAAAATGTTGAAC
GTGACGTCGTTTTTGGGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MALQETIEQTVTGLGYELVEIERTGGGLLRVTIDMPYVSGAEQFINAEDCEKVTRQLQFVLEVEGADYSRLEVSSPGIDR
PLRNEKDFERFAGELVDITLKAPIGVAASAGSAVSANRKKFRGTLERAAPKDGVAGWQIVWSDEPPVKPGQKVSKKKLPA
PLQALGFTLDEIHQARLAPVVDFKGRKPKIVPGADKSSEK

Sequences:

>Translated_200_residues
MALQETIEQTVTGLGYELVEIERTGGGLLRVTIDMPYVSGAEQFINAEDCEKVTRQLQFVLEVEGADYSRLEVSSPGIDR
PLRNEKDFERFAGELVDITLKAPIGVAASAGSAVSANRKKFRGTLERAAPKDGVAGWQIVWSDEPPVKPGQKVSKKKLPA
PLQALGFTLDEIHQARLAPVVDFKGRKPKIVPGADKSSEK
>Mature_199_residues
ALQETIEQTVTGLGYELVEIERTGGGLLRVTIDMPYVSGAEQFINAEDCEKVTRQLQFVLEVEGADYSRLEVSSPGIDRP
LRNEKDFERFAGELVDITLKAPIGVAASAGSAVSANRKKFRGTLERAAPKDGVAGWQIVWSDEPPVKPGQKVSKKKLPAP
LQALGFTLDEIHQARLAPVVDFKGRKPKIVPGADKSSEK

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=129, Percent_Identity=37.984496124031, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_POLSJ (Q12AU9)

Other databases:

- EMBL:   CP000316
- RefSeq:   YP_549241.1
- ProteinModelPortal:   Q12AU9
- SMR:   Q12AU9
- STRING:   Q12AU9
- GeneID:   4014923
- GenomeReviews:   CP000316_GR
- KEGG:   pol:Bpro_2424
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   MGYELVE
- PhylomeDB:   Q12AU9
- ProtClustDB:   PRK14642
- BioCyc:   PSP296591:BPRO_2424-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 21771; Mature: 21640

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALQETIEQTVTGLGYELVEIERTGGGLLRVTIDMPYVSGAEQFINAEDCEKVTRQLQFV
CCHHHHHHHHHHHCCEEEEEEEECCCCEEEEEEECCCCCCHHHHCCHHHHHHHHHHHHEE
LEVEGADYSRLEVSSPGIDRPLRNEKDFERFAGELVDITLKAPIGVAASAGSAVSANRKK
EEECCCCCCEEEECCCCCCCCCCCHHHHHHHCCHHEEEEEECCCCEECCCCCCHHHHHHH
FRGTLERAAPKDGVAGWQIVWSDEPPVKPGQKVSKKKLPAPLQALGFTLDEIHQARLAPV
HHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCHHHHCCCHHHHHHHHCCCE
VDFKGRKPKIVPGADKSSEK
ECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALQETIEQTVTGLGYELVEIERTGGGLLRVTIDMPYVSGAEQFINAEDCEKVTRQLQFV
CHHHHHHHHHHHCCEEEEEEEECCCCEEEEEEECCCCCCHHHHCCHHHHHHHHHHHHEE
LEVEGADYSRLEVSSPGIDRPLRNEKDFERFAGELVDITLKAPIGVAASAGSAVSANRKK
EEECCCCCCEEEECCCCCCCCCCCHHHHHHHCCHHEEEEEECCCCEECCCCCCHHHHHHH
FRGTLERAAPKDGVAGWQIVWSDEPPVKPGQKVSKKKLPAPLQALGFTLDEIHQARLAPV
HHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCHHHHCCCHHHHHHHHCCCE
VDFKGRKPKIVPGADKSSEK
ECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA