| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788282
Identifier: 91788282
GI number: 91788282
Start: 2516185
End: 2516532
Strand: Direct
Name: 91788282
Synonym: Bpro_2417
Alternate gene names: NA
Gene position: 2516185-2516532 (Clockwise)
Preceding gene: 91788280
Following gene: 91788283
Centisome position: 48.39
GC content: 60.34
Gene sequence:
>348_bases ATGACACACAAAGGTAGCTGCCACTGCGGGCGGATCGCGTTCGAAGTTGACGGCGAGCCCACCAAGGTGCTGGCGTGCAA TTGCTCCATCTGCTCGCGCAAGGGGTCGCTTCTCTGGTTCGTTCAGCGGGACACACTGCGCCTGCTAACGCCTGACGAAA ATGCCAGCACGTATTTGTTCAACAAGCACGCCATCCGGCATCGTTTCTGCCCTACCTGCGGCATCCACCCCTATGGCGAA GGGGCCGACCCTTCGGGCCAGCGCATGGCGGCTGTCAATGTCCGCTGCCTCGAAGACATTGACCTGGCTGCGCTTGCCGT CGAACATTTCGACGGCCGCTCTTATTGA
Upstream 100 bases:
>100_bases ATTTGGGCAAGGTGATGCGGTACAACACGTACCAGTCTGTTGTAAAAATTCGAACTTCGGGCTCCCCGCGGGCCGTCTCA TGAAAGAAAGGAATCAGGCC
Downstream 100 bases:
>100_bases ACAAAAAAACCTTGCTCCCGGCAGGCTGGCCCGCCTGCCAGCTCTCAGCCATTCACCCAGCAACCATGATCCCCAGCGAT GTAGAAACCATAGAACGTGC
Product: glutathione-dependent formaldehyde-activating protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Family; Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating Protein Gfa
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MTHKGSCHCGRIAFEVDGEPTKVLACNCSICSRKGSLLWFVQRDTLRLLTPDENASTYLFNKHAIRHRFCPTCGIHPYGE GADPSGQRMAAVNVRCLEDIDLAALAVEHFDGRSY
Sequences:
>Translated_115_residues MTHKGSCHCGRIAFEVDGEPTKVLACNCSICSRKGSLLWFVQRDTLRLLTPDENASTYLFNKHAIRHRFCPTCGIHPYGE GADPSGQRMAAVNVRCLEDIDLAALAVEHFDGRSY >Mature_114_residues THKGSCHCGRIAFEVDGEPTKVLACNCSICSRKGSLLWFVQRDTLRLLTPDENASTYLFNKHAIRHRFCPTCGIHPYGEG ADPSGQRMAAVNVRCLEDIDLAALAVEHFDGRSY
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI56118234, Length=117, Percent_Identity=32.4786324786325, Blast_Score=73, Evalue=6e-14, Organism=Caenorhabditis elegans, GI25149380, Length=117, Percent_Identity=28.2051282051282, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12770; Mature: 12638
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 7.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHKGSCHCGRIAFEVDGEPTKVLACNCSICSRKGSLLWFVQRDTLRLLTPDENASTYLF CCCCCCCEECEEEEEECCCCCEEEEECCCEECCCCCEEEEEECCEEEEECCCCCCCEEEE NKHAIRHRFCPTCGIHPYGEGADPSGQRMAAVNVRCLEDIDLAALAVEHFDGRSY ECCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCC >Mature Secondary Structure THKGSCHCGRIAFEVDGEPTKVLACNCSICSRKGSLLWFVQRDTLRLLTPDENASTYLF CCCCCCEECEEEEEECCCCCEEEEECCCEECCCCCEEEEEECCEEEEECCCCCCCEEEE NKHAIRHRFCPTCGIHPYGEGADPSGQRMAAVNVRCLEDIDLAALAVEHFDGRSY ECCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA