Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is livK [C]

Identifier: 91788276

GI number: 91788276

Start: 2509004

End: 2510134

Strand: Direct

Name: livK [C]

Synonym: Bpro_2411

Alternate gene names: 91788276

Gene position: 2509004-2510134 (Clockwise)

Preceding gene: 91788275

Following gene: 91788280

Centisome position: 48.25

GC content: 54.64

Gene sequence:

>1131_bases
ATGCAAATGAAATTAAAACTGACAGTAGTGGCCGCACTCGCAACTTTGGCCGGCATTGCCTCAGCTCAGGATGTCGTGGT
CAAGATTGGCCACGTAGCGCCCATGTCCGGTTCGCAGGCTCACTACGGTAAAGACAATGAAAACGGTGCGCGGATGGCTG
TTGAAGACCTGAACACGCAAAACGTTGTCATTGGGGGCAAAAAAATCAAGTTTGAATTGCTTGCGGAAGACGACGCCGCC
GATCCAAAACAGGGCACCGCTGCTGCACAGAAACTGTGCGACTCCAAAGTAGCCGGTGTGGTGGGCCACCTCAATTCAGG
TACCACGATTCCCGCCTCCAAGGTTTACAACGATTGCGGTATTCCCCACGTCACGGGTGCCGCGACCAACCCCAACCTGA
CCAAGCCCGGTTACAAAACCACCTACCGCATCATTGCCAACGACAATGCGCTGGGCGCCGGTCTGGCGTTCTACGCGGCT
GACGCACTGAAACTGAAAAAAGTTGCCATCATTGATGACCGTACGGCCTATGGCCAGGGCGTTGCCGAAGTCTTCAAAAA
GACGGCTTTGACGAAAGGCATGACCGTGGTTGACGAGCAGTTCACCACCGACAAGGCCACCGACTTCATGGCTATCCTCA
CGGCCGTCAAGTCGAAAAATCCCGATGCGATTTTCTTCGGCGGCATGGACCCACAAGGCGGCCCGATGTTGCGCCAGATG
GAGCAGCTCGGCATGGGCAACGTGAAGTACTTTGGTGGTGATGGCATCTGCACGTCCGAACTTGCCAAGCTGGCTGCTGG
CGCCAAGACCCTCAACAATGTGGTGTGCGCTGAAGGCGGTGCTTCGCTCGCCAAAATGCCTGGCGGTGAAGCCTGGAAAA
AGCGTTACGACGCCAAGTACCCCAATCAGTTCCAGGTTTACAGTCCGTACACCTATGACGCTACCTTCGTTTTGGTCGAC
GCCATGAAGCGCGCCAATTCGACCGATCCAAAGGTCTACACCCCTGAGTTGATCAAAACCAACTACAAAGGCGTGACCAC
CACGATCGCTTTCGAGCCCAATGGCGAATTGAAAAACCCCGCCATCACTTTGTATGTTTACAAAGATGGCAAGAAATCCG
CCCTGAACTGA

Upstream 100 bases:

>100_bases
TGCTATGGTGCGGGCCCGGAAATTGCGTTATGTTCGGCCCCGTTGAGTTATAAAAATTGATCTCAACCTTTAACGGTAAT
TTCCTAATCGGAGTGTTTTT

Downstream 100 bases:

>100_bases
TCAGTTCGCGCGCATGAAAAAGCCACCGCAAGGTGGCTTTTTTTTGGAGGGTCCAACCGTTAGATGCTATCGGGCTGCGA
TCAGACCATCATCCTCGGCC

Product: extracellular ligand-binding receptor

Products: ADP; phosphate; L-leucine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MQMKLKLTVVAALATLAGIASAQDVVVKIGHVAPMSGSQAHYGKDNENGARMAVEDLNTQNVVIGGKKIKFELLAEDDAA
DPKQGTAAAQKLCDSKVAGVVGHLNSGTTIPASKVYNDCGIPHVTGAATNPNLTKPGYKTTYRIIANDNALGAGLAFYAA
DALKLKKVAIIDDRTAYGQGVAEVFKKTALTKGMTVVDEQFTTDKATDFMAILTAVKSKNPDAIFFGGMDPQGGPMLRQM
EQLGMGNVKYFGGDGICTSELAKLAAGAKTLNNVVCAEGGASLAKMPGGEAWKKRYDAKYPNQFQVYSPYTYDATFVLVD
AMKRANSTDPKVYTPELIKTNYKGVTTTIAFEPNGELKNPAITLYVYKDGKKSALN

Sequences:

>Translated_376_residues
MQMKLKLTVVAALATLAGIASAQDVVVKIGHVAPMSGSQAHYGKDNENGARMAVEDLNTQNVVIGGKKIKFELLAEDDAA
DPKQGTAAAQKLCDSKVAGVVGHLNSGTTIPASKVYNDCGIPHVTGAATNPNLTKPGYKTTYRIIANDNALGAGLAFYAA
DALKLKKVAIIDDRTAYGQGVAEVFKKTALTKGMTVVDEQFTTDKATDFMAILTAVKSKNPDAIFFGGMDPQGGPMLRQM
EQLGMGNVKYFGGDGICTSELAKLAAGAKTLNNVVCAEGGASLAKMPGGEAWKKRYDAKYPNQFQVYSPYTYDATFVLVD
AMKRANSTDPKVYTPELIKTNYKGVTTTIAFEPNGELKNPAITLYVYKDGKKSALN
>Mature_376_residues
MQMKLKLTVVAALATLAGIASAQDVVVKIGHVAPMSGSQAHYGKDNENGARMAVEDLNTQNVVIGGKKIKFELLAEDDAA
DPKQGTAAAQKLCDSKVAGVVGHLNSGTTIPASKVYNDCGIPHVTGAATNPNLTKPGYKTTYRIIANDNALGAGLAFYAA
DALKLKKVAIIDDRTAYGQGVAEVFKKTALTKGMTVVDEQFTTDKATDFMAILTAVKSKNPDAIFFGGMDPQGGPMLRQM
EQLGMGNVKYFGGDGICTSELAKLAAGAKTLNNVVCAEGGASLAKMPGGEAWKKRYDAKYPNQFQVYSPYTYDATFVLVD
AMKRANSTDPKVYTPELIKTNYKGVTTTIAFEPNGELKNPAITLYVYKDGKKSALN

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

Organism=Escherichia coli, GI1789867, Length=381, Percent_Identity=31.496062992126, Blast_Score=164, Evalue=1e-41,
Organism=Escherichia coli, GI48994941, Length=266, Percent_Identity=33.0827067669173, Blast_Score=139, Evalue=4e-34,

Paralogues:

None

Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 39903; Mature: 39903

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMKLKLTVVAALATLAGIASAQDVVVKIGHVAPMSGSQAHYGKDNENGARMAVEDLNTQ
CCEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
NVVIGGKKIKFELLAEDDAADPKQGTAAAQKLCDSKVAGVVGHLNSGTTIPASKVYNDCG
EEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHCC
IPHVTGAATNPNLTKPGYKTTYRIIANDNALGAGLAFYAADALKLKKVAIIDDRTAYGQG
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHEEEEEEEEECCCHHHHH
VAEVFKKTALTKGMTVVDEQFTTDKATDFMAILTAVKSKNPDAIFFGGMDPQGGPMLRQM
HHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHH
EQLGMGNVKYFGGDGICTSELAKLAAGAKTLNNVVCAEGGASLAKMPGGEAWKKRYDAKY
HHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCEEECCCCCCHHCCCCCHHHHHHCCCCC
PNQFQVYSPYTYDATFVLVDAMKRANSTDPKVYTPELIKTNYKGVTTTIAFEPNGELKNP
CCCEEEECCCCCCHHHHEEHHHHHCCCCCCCEECHHHHHCCCCCEEEEEEECCCCCCCCC
AITLYVYKDGKKSALN
EEEEEEEECCCCCCCC
>Mature Secondary Structure
MQMKLKLTVVAALATLAGIASAQDVVVKIGHVAPMSGSQAHYGKDNENGARMAVEDLNTQ
CCEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
NVVIGGKKIKFELLAEDDAADPKQGTAAAQKLCDSKVAGVVGHLNSGTTIPASKVYNDCG
EEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHCC
IPHVTGAATNPNLTKPGYKTTYRIIANDNALGAGLAFYAADALKLKKVAIIDDRTAYGQG
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHEEEEEEEEECCCHHHHH
VAEVFKKTALTKGMTVVDEQFTTDKATDFMAILTAVKSKNPDAIFFGGMDPQGGPMLRQM
HHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHH
EQLGMGNVKYFGGDGICTSELAKLAAGAKTLNNVVCAEGGASLAKMPGGEAWKKRYDAKY
HHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCEEECCCCCCHHCCCCCHHHHHHCCCCC
PNQFQVYSPYTYDATFVLVDAMKRANSTDPKVYTPELIKTNYKGVTTTIAFEPNGELKNP
CCCEEEECCCCCCHHHHEEHHHHHCCCCCCCEECHHHHHCCCCCEEEEEEECCCCCCCCC
AITLYVYKDGKKSALN
EEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-leucine [Periplasm]; H2O [C]

Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA