| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is livK [C]
Identifier: 91788276
GI number: 91788276
Start: 2509004
End: 2510134
Strand: Direct
Name: livK [C]
Synonym: Bpro_2411
Alternate gene names: 91788276
Gene position: 2509004-2510134 (Clockwise)
Preceding gene: 91788275
Following gene: 91788280
Centisome position: 48.25
GC content: 54.64
Gene sequence:
>1131_bases ATGCAAATGAAATTAAAACTGACAGTAGTGGCCGCACTCGCAACTTTGGCCGGCATTGCCTCAGCTCAGGATGTCGTGGT CAAGATTGGCCACGTAGCGCCCATGTCCGGTTCGCAGGCTCACTACGGTAAAGACAATGAAAACGGTGCGCGGATGGCTG TTGAAGACCTGAACACGCAAAACGTTGTCATTGGGGGCAAAAAAATCAAGTTTGAATTGCTTGCGGAAGACGACGCCGCC GATCCAAAACAGGGCACCGCTGCTGCACAGAAACTGTGCGACTCCAAAGTAGCCGGTGTGGTGGGCCACCTCAATTCAGG TACCACGATTCCCGCCTCCAAGGTTTACAACGATTGCGGTATTCCCCACGTCACGGGTGCCGCGACCAACCCCAACCTGA CCAAGCCCGGTTACAAAACCACCTACCGCATCATTGCCAACGACAATGCGCTGGGCGCCGGTCTGGCGTTCTACGCGGCT GACGCACTGAAACTGAAAAAAGTTGCCATCATTGATGACCGTACGGCCTATGGCCAGGGCGTTGCCGAAGTCTTCAAAAA GACGGCTTTGACGAAAGGCATGACCGTGGTTGACGAGCAGTTCACCACCGACAAGGCCACCGACTTCATGGCTATCCTCA CGGCCGTCAAGTCGAAAAATCCCGATGCGATTTTCTTCGGCGGCATGGACCCACAAGGCGGCCCGATGTTGCGCCAGATG GAGCAGCTCGGCATGGGCAACGTGAAGTACTTTGGTGGTGATGGCATCTGCACGTCCGAACTTGCCAAGCTGGCTGCTGG CGCCAAGACCCTCAACAATGTGGTGTGCGCTGAAGGCGGTGCTTCGCTCGCCAAAATGCCTGGCGGTGAAGCCTGGAAAA AGCGTTACGACGCCAAGTACCCCAATCAGTTCCAGGTTTACAGTCCGTACACCTATGACGCTACCTTCGTTTTGGTCGAC GCCATGAAGCGCGCCAATTCGACCGATCCAAAGGTCTACACCCCTGAGTTGATCAAAACCAACTACAAAGGCGTGACCAC CACGATCGCTTTCGAGCCCAATGGCGAATTGAAAAACCCCGCCATCACTTTGTATGTTTACAAAGATGGCAAGAAATCCG CCCTGAACTGA
Upstream 100 bases:
>100_bases TGCTATGGTGCGGGCCCGGAAATTGCGTTATGTTCGGCCCCGTTGAGTTATAAAAATTGATCTCAACCTTTAACGGTAAT TTCCTAATCGGAGTGTTTTT
Downstream 100 bases:
>100_bases TCAGTTCGCGCGCATGAAAAAGCCACCGCAAGGTGGCTTTTTTTTGGAGGGTCCAACCGTTAGATGCTATCGGGCTGCGA TCAGACCATCATCCTCGGCC
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MQMKLKLTVVAALATLAGIASAQDVVVKIGHVAPMSGSQAHYGKDNENGARMAVEDLNTQNVVIGGKKIKFELLAEDDAA DPKQGTAAAQKLCDSKVAGVVGHLNSGTTIPASKVYNDCGIPHVTGAATNPNLTKPGYKTTYRIIANDNALGAGLAFYAA DALKLKKVAIIDDRTAYGQGVAEVFKKTALTKGMTVVDEQFTTDKATDFMAILTAVKSKNPDAIFFGGMDPQGGPMLRQM EQLGMGNVKYFGGDGICTSELAKLAAGAKTLNNVVCAEGGASLAKMPGGEAWKKRYDAKYPNQFQVYSPYTYDATFVLVD AMKRANSTDPKVYTPELIKTNYKGVTTTIAFEPNGELKNPAITLYVYKDGKKSALN
Sequences:
>Translated_376_residues MQMKLKLTVVAALATLAGIASAQDVVVKIGHVAPMSGSQAHYGKDNENGARMAVEDLNTQNVVIGGKKIKFELLAEDDAA DPKQGTAAAQKLCDSKVAGVVGHLNSGTTIPASKVYNDCGIPHVTGAATNPNLTKPGYKTTYRIIANDNALGAGLAFYAA DALKLKKVAIIDDRTAYGQGVAEVFKKTALTKGMTVVDEQFTTDKATDFMAILTAVKSKNPDAIFFGGMDPQGGPMLRQM EQLGMGNVKYFGGDGICTSELAKLAAGAKTLNNVVCAEGGASLAKMPGGEAWKKRYDAKYPNQFQVYSPYTYDATFVLVD AMKRANSTDPKVYTPELIKTNYKGVTTTIAFEPNGELKNPAITLYVYKDGKKSALN >Mature_376_residues MQMKLKLTVVAALATLAGIASAQDVVVKIGHVAPMSGSQAHYGKDNENGARMAVEDLNTQNVVIGGKKIKFELLAEDDAA DPKQGTAAAQKLCDSKVAGVVGHLNSGTTIPASKVYNDCGIPHVTGAATNPNLTKPGYKTTYRIIANDNALGAGLAFYAA DALKLKKVAIIDDRTAYGQGVAEVFKKTALTKGMTVVDEQFTTDKATDFMAILTAVKSKNPDAIFFGGMDPQGGPMLRQM EQLGMGNVKYFGGDGICTSELAKLAAGAKTLNNVVCAEGGASLAKMPGGEAWKKRYDAKYPNQFQVYSPYTYDATFVLVD AMKRANSTDPKVYTPELIKTNYKGVTTTIAFEPNGELKNPAITLYVYKDGKKSALN
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=381, Percent_Identity=31.496062992126, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI48994941, Length=266, Percent_Identity=33.0827067669173, Blast_Score=139, Evalue=4e-34,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 39903; Mature: 39903
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMKLKLTVVAALATLAGIASAQDVVVKIGHVAPMSGSQAHYGKDNENGARMAVEDLNTQ CCEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCC NVVIGGKKIKFELLAEDDAADPKQGTAAAQKLCDSKVAGVVGHLNSGTTIPASKVYNDCG EEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHCC IPHVTGAATNPNLTKPGYKTTYRIIANDNALGAGLAFYAADALKLKKVAIIDDRTAYGQG CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHEEEEEEEEECCCHHHHH VAEVFKKTALTKGMTVVDEQFTTDKATDFMAILTAVKSKNPDAIFFGGMDPQGGPMLRQM HHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHH EQLGMGNVKYFGGDGICTSELAKLAAGAKTLNNVVCAEGGASLAKMPGGEAWKKRYDAKY HHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCEEECCCCCCHHCCCCCHHHHHHCCCCC PNQFQVYSPYTYDATFVLVDAMKRANSTDPKVYTPELIKTNYKGVTTTIAFEPNGELKNP CCCEEEECCCCCCHHHHEEHHHHHCCCCCCCEECHHHHHCCCCCEEEEEEECCCCCCCCC AITLYVYKDGKKSALN EEEEEEEECCCCCCCC >Mature Secondary Structure MQMKLKLTVVAALATLAGIASAQDVVVKIGHVAPMSGSQAHYGKDNENGARMAVEDLNTQ CCEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCC NVVIGGKKIKFELLAEDDAADPKQGTAAAQKLCDSKVAGVVGHLNSGTTIPASKVYNDCG EEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHCC IPHVTGAATNPNLTKPGYKTTYRIIANDNALGAGLAFYAADALKLKKVAIIDDRTAYGQG CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHEEEEEEEEECCCHHHHH VAEVFKKTALTKGMTVVDEQFTTDKATDFMAILTAVKSKNPDAIFFGGMDPQGGPMLRQM HHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHH EQLGMGNVKYFGGDGICTSELAKLAAGAKTLNNVVCAEGGASLAKMPGGEAWKKRYDAKY HHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCEEECCCCCCHHCCCCCHHHHHHCCCCC PNQFQVYSPYTYDATFVLVDAMKRANSTDPKVYTPELIKTNYKGVTTTIAFEPNGELKNP CCCEEEECCCCCCHHHHEEHHHHHCCCCCCCEECHHHHHCCCCCEEEEEEECCCCCCCCC AITLYVYKDGKKSALN EEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA