| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yibF [C]
Identifier: 91788230
GI number: 91788230
Start: 2457337
End: 2457972
Strand: Reverse
Name: yibF [C]
Synonym: Bpro_2363
Alternate gene names: 91788230
Gene position: 2457972-2457337 (Counterclockwise)
Preceding gene: 91788231
Following gene: 91788228
Centisome position: 47.27
GC content: 61.16
Gene sequence:
>636_bases ATGCAACTCATCGGAATGCTTGACTCACCTTACGTTCGCCGCGTGGCTATTTCCCTGCAGCTTCTCGGTCTGCGTTTTGA ACACCGGTCGCTGTCCGTGTTCAGCACCTTTGCGCAGTTCCAGCAAATCAACCCCGTTGTCAAGGCTCCCTCACTGATTT GCGATGACGGCCAGGTCCTCATGGATTCCACCTTGATCATTGACTACGCCGAGGCCATTGCAGCGCCCAAGAGCCTGATG CCGGCCACGCTGCCGGAGCGCCAGCAGGCGTTGCGCGTGATCGGCCTGGCCCTGGCTGCGTGCGAGAAAAGCGTTCAGAT CGTCTATGAGCGCAAGCTCCGGCCTGCCGAGAAATTGCACCAGCCGTGGGTAACCCGCGTCACCGGCCAGCTTCTGGCCG CCTTCGATGGGCTGGAATCAGAACTTCAGCGCAAACCGCTGGCGACCACCAGCGACACCATGGGTCAGGACGGCGTGAGC ACGGCGATTGCCTGGCGCTTCACGCAAGCGATGTTTCCGGAAGTGCTGGACGTGGGCCGCTACCCCGCGTTGCGTGAATT CTCGTTACAGGCGGAGCAACTGCCGGAGTTCATGGCAGCGCCCCACAGCGACCTCACTTACCACGACAAGCCCTAG
Upstream 100 bases:
>100_bases CGCGATCTCATTGTTCAGTTGTCGCCACTTCCGCAAAAAGACAAGCCCGCCATTGCCGGCAAGCCCTGAATCCTTGTAAC CGGTTCCAACAGGAGAAACC
Downstream 100 bases:
>100_bases CTGGTCTGTGCAAGGCAGCTTGCCCCCCGAGCTGACCCGCTGCCGCAGCGCGGCGGCGGCGTGGCAATTCATGCACATGC TGCGGCAGCCGGCGCCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Domain Protein; Glutathione Transferase; Glutathione S-Transferase Domain; Glutathione S-Transferase Family Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase Related Protein; Glutathione S-Transferase Like Protein; S-Transferase; Glutathione S-Transferase C-Terminal Domain-Containing; Glutathione S-Transferase N-Terminal Domain Protein
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MQLIGMLDSPYVRRVAISLQLLGLRFEHRSLSVFSTFAQFQQINPVVKAPSLICDDGQVLMDSTLIIDYAEAIAAPKSLM PATLPERQQALRVIGLALAACEKSVQIVYERKLRPAEKLHQPWVTRVTGQLLAAFDGLESELQRKPLATTSDTMGQDGVS TAIAWRFTQAMFPEVLDVGRYPALREFSLQAEQLPEFMAAPHSDLTYHDKP
Sequences:
>Translated_211_residues MQLIGMLDSPYVRRVAISLQLLGLRFEHRSLSVFSTFAQFQQINPVVKAPSLICDDGQVLMDSTLIIDYAEAIAAPKSLM PATLPERQQALRVIGLALAACEKSVQIVYERKLRPAEKLHQPWVTRVTGQLLAAFDGLESELQRKPLATTSDTMGQDGVS TAIAWRFTQAMFPEVLDVGRYPALREFSLQAEQLPEFMAAPHSDLTYHDKP >Mature_211_residues MQLIGMLDSPYVRRVAISLQLLGLRFEHRSLSVFSTFAQFQQINPVVKAPSLICDDGQVLMDSTLIIDYAEAIAAPKSLM PATLPERQQALRVIGLALAACEKSVQIVYERKLRPAEKLHQPWVTRVTGQLLAAFDGLESELQRKPLATTSDTMGQDGVS TAIAWRFTQAMFPEVLDVGRYPALREFSLQAEQLPEFMAAPHSDLTYHDKP
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23526; Mature: 23526
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLIGMLDSPYVRRVAISLQLLGLRFEHRSLSVFSTFAQFQQINPVVKAPSLICDDGQVL CCCCCCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHCCHHHHCCCEEECCCCEE MDSTLIIDYAEAIAAPKSLMPATLPERQQALRVIGLALAACEKSVQIVYERKLRPAEKLH HHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH QPWVTRVTGQLLAAFDGLESELQRKPLATTSDTMGQDGVSTAIAWRFTQAMFPEVLDVGR CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC YPALREFSLQAEQLPEFMAAPHSDLTYHDKP CCCHHHHHCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MQLIGMLDSPYVRRVAISLQLLGLRFEHRSLSVFSTFAQFQQINPVVKAPSLICDDGQVL CCCCCCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHCCHHHHCCCEEECCCCEE MDSTLIIDYAEAIAAPKSLMPATLPERQQALRVIGLALAACEKSVQIVYERKLRPAEKLH HHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH QPWVTRVTGQLLAAFDGLESELQRKPLATTSDTMGQDGVSTAIAWRFTQAMFPEVLDVGR CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC YPALREFSLQAEQLPEFMAAPHSDLTYHDKP CCCHHHHHCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA