| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is chpE [H]
Identifier: 91788231
GI number: 91788231
Start: 2458004
End: 2458672
Strand: Reverse
Name: chpE [H]
Synonym: Bpro_2364
Alternate gene names: 91788231
Gene position: 2458672-2458004 (Counterclockwise)
Preceding gene: 91788232
Following gene: 91788230
Centisome position: 47.28
GC content: 62.63
Gene sequence:
>669_bases ATGGCCGCACTCTTTATCTCCGCTTTCCTGCTCGGGCTTTTGTTCAACGCCGCGCCCGGCGCCGTGTTTGCCGAAACCGT GCGCCAGGGCGTACGCGGCGGGTTCCGGCCTGCCCTTGCCGTGCAAATCGGATCGCTGGCTGGAGATGCGCTCTGGGCCC TGTTGGGGCTGGCAGGCATAGGACTGCTCCTTCAATTGGAATGGATTCGCTGGCCCGTCGGCATAGCTGGGGCCGTGTAC CTTTTCTGGCTTGCCCGCGACTCCTGGGTTTCCGCCAGCCAGGAGTTCTCTTTAACCGGCTCGGCGACGGTCGAGCCCAA ACGGGCCATGCGTGCCGGCGTTCTCCTGTCCGTGACCAACCCGCAAAACATTGCCTATTGGGCCGCTCTGGGAAGCGCCC TTGGGGCCATCGGCATCCATGAACCAAAGGCCTCCGACTACGCCATCTTCTTTTTGGGGTTCATGGTGTCGTCGGTGGTG TGGGCTTTCTTCTGCGCGGCAGTTGTTGACAGAATCTTTCGCCGCGCAGGCACGCGGTGGGCCAAGGCCACCTACAAACT GTGCGCCGCCGCGTTCCTGGCGCTGGCCCTCGGTTCGATGCGCGATCTCATTGTTCAGTTGTCGCCACTTCCGCAAAAAG ACAAGCCCGCCATTGCCGGCAAGCCCTGA
Upstream 100 bases:
>100_bases TTTGAGGGCGAGTTCGCGTGGCAGGTTGAGAAATTCAAGGAGCTGGCCGCGGCCTGCGCGGTATAAACGTCAGGTCTTCT TTTTTTTTCACATCATCTTC
Downstream 100 bases:
>100_bases ATCCTTGTAACCGGTTCCAACAGGAGAAACCATGCAACTCATCGGAATGCTTGACTCACCTTACGTTCGCCGCGTGGCTA TTTCCCTGCAGCTTCTCGGT
Product: lysine exporter protein LysE/YggA
Products: homoserine lactone [Periplasm]; Proton [Cytoplasm]; homoserine [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MAALFISAFLLGLLFNAAPGAVFAETVRQGVRGGFRPALAVQIGSLAGDALWALLGLAGIGLLLQLEWIRWPVGIAGAVY LFWLARDSWVSASQEFSLTGSATVEPKRAMRAGVLLSVTNPQNIAYWAALGSALGAIGIHEPKASDYAIFFLGFMVSSVV WAFFCAAVVDRIFRRAGTRWAKATYKLCAAAFLALALGSMRDLIVQLSPLPQKDKPAIAGKP
Sequences:
>Translated_222_residues MAALFISAFLLGLLFNAAPGAVFAETVRQGVRGGFRPALAVQIGSLAGDALWALLGLAGIGLLLQLEWIRWPVGIAGAVY LFWLARDSWVSASQEFSLTGSATVEPKRAMRAGVLLSVTNPQNIAYWAALGSALGAIGIHEPKASDYAIFFLGFMVSSVV WAFFCAAVVDRIFRRAGTRWAKATYKLCAAAFLALALGSMRDLIVQLSPLPQKDKPAIAGKP >Mature_221_residues AALFISAFLLGLLFNAAPGAVFAETVRQGVRGGFRPALAVQIGSLAGDALWALLGLAGIGLLLQLEWIRWPVGIAGAVYL FWLARDSWVSASQEFSLTGSATVEPKRAMRAGVLLSVTNPQNIAYWAALGSALGAIGIHEPKASDYAIFFLGFMVSSVVW AFFCAAVVDRIFRRAGTRWAKATYKLCAAAFLALALGSMRDLIVQLSPLPQKDKPAIAGKP
Specific function: Conducts The Efflux Of Homoserine And Homoserine Lactone. [C]
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 23613; Mature: 23482
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALFISAFLLGLLFNAAPGAVFAETVRQGVRGGFRPALAVQIGSLAGDALWALLGLAGI CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GLLLQLEWIRWPVGIAGAVYLFWLARDSWVSASQEFSLTGSATVEPKRAMRAGVLLSVTN HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHCCEEEEECC PQNIAYWAALGSALGAIGIHEPKASDYAIFFLGFMVSSVVWAFFCAAVVDRIFRRAGTRW CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AKATYKLCAAAFLALALGSMRDLIVQLSPLPQKDKPAIAGKP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure AALFISAFLLGLLFNAAPGAVFAETVRQGVRGGFRPALAVQIGSLAGDALWALLGLAGI HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GLLLQLEWIRWPVGIAGAVYLFWLARDSWVSASQEFSLTGSATVEPKRAMRAGVLLSVTN HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHCCEEEEECC PQNIAYWAALGSALGAIGIHEPKASDYAIFFLGFMVSSVVWAFFCAAVVDRIFRRAGTRW CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AKATYKLCAAAFLALALGSMRDLIVQLSPLPQKDKPAIAGKP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; homoserine [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + homoserine lactone [Cytoplasm] = Proton [Cytoplasm] + homoserine lactone [Periplasm] Proton [Periplasm] + homoserine [Cytoplasm] = Proton [Cytoplasm] + homoserine [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]